prot_Ecto-sp6_S_contig9.18197.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18197.1
Unique Nameprot_Ecto-sp6_S_contig9.18197.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length450
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18197.1 vs. uniprot
Match: D8LGZ8_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ8_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 1.930e-190
Identity = 388/435 (89.20%), Postives = 388/435 (89.20%), Query Frame = 0
Query:    1 MSTSKLRRSIASLDAFDCTSIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGWMHKNRKSMPMPCVGLCGRLENRLSFSFLPGLSWPGHRQEAVPSTAVSAXXXXXXXXXXXXXXXXXXHGSADTVVIRRRNLAGLPPPVGKNASEAAEAEAAATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDGGDDSASPTTTSGPATGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMETLRAFLAVGXXXXXXXXXXXXXX--GAVGGAQFLLSSKRYRSTKPRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATAXXXXXXXXXXXSPGPRGTWGRTAARLKARRCLVRAAGVVGGRRGGGAEEAQVGRGASV 433
            MSTSKLRRSIASLDAFDCTSIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGWMHKNRKSMP PCVGLCGRLENRLSFSFLPGLSWPGHRQEAVPSTAVSA  XXXXXXXXXX      HGSADTVVIRRRNLAGLPPPVGKNASEAAEAEAAATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGD                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    RA     XXXXXXXXXXXXXX  GAVGGAQFLLSSKRYRSTKPRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATA XXXX      SPGPRGTWGRTAARLKARRCLVRAAG VGGRRGGGAEEAQVGRGA V
Sbjct:    1 MSTSKLRRSIASLDAFDCTSIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGWMHKNRKSMPTPCVGLCGRLENRLSFSFLPGLSWPGHRQEAVPSTAVSAAPXXXXXXXXXX------HGSADTVVIRRRNLAGLPPPVGKNASEAAEAEAAATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAXXXXXXXXXXXXXXXXXXXXXGAVGGAQFLLSSKRYRSTKPRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATAAXXXXA-----SPGPRGTWGRTAARLKARRCLVRAAGSVGGRRGGGAEEAQVGRGAGV 424          
BLAST of mRNA_Ecto-sp6_S_contig9.18197.1 vs. uniprot
Match: A0A6H5KJG2_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJG2_9PHAE)

HSP 1 Score: 478 bits (1230), Expect = 9.630e-160
Identity = 324/448 (72.32%), Postives = 332/448 (74.11%), Query Frame = 0
Query:    1 MSTSKLRRSIASLDAFDCTSIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGWMHKNRKSMPMPCVGLCGRLENRLSFSFLPGLSWPGHRQEAVPSTAVSAXXXXXXXXXXXXXXXXXXHGSADTVVIRRRNLAGLPPPVGKNASEAAEAEAA-----------------------------------------------------------------------ATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDGGDDSASPTTT--SGPATGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMETLRAFLAVGXXXXXXXXXXXXXXGAVGGAQFLLSSKRYRSTKPRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATA 375
            MSTSKLRRSIASLDAFDC SIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGW+HKNRKSMP PC+GLCGRLENRLSFSFLPGLSWPGHRQEA+PSTA   XXXXXXXXXXXX       GSA+TVV+RRRNLAGLPPPVGKNASEAAEA+A                                                                        ATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGD    +ASPTTT  SGPATGV XXXXXXXXXXXXXXXXXXXXXXX                   METLRAFLAVG     XXXXXXXXX AVGGAQFLLSSKRYRST+PRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATA
Sbjct:    1 MSTSKLRRSIASLDAFDCKSIEPESRDAAALALALRSTLEQARAGQMSWSDRDALLGWLHKNRKSMPTPCLGLCGRLENRLSFSFLPGLSWPGHRQEALPSTAAXXXXXXXXXXXXXX-------GSAETVVVRRRNLAGLPPPVGKNASEAAEADAXXXXXGSSSAASPSYVSPDSKRGKGAGQEDGNYSSTDDEAGAAGVIGLGGAPRDLVSSGLGSPEVLPSVLEQATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDXXXXNASPTTTTTSGPATGVPXXXXXXXXXXXXXXXXXXXXXXXAFSATGGSASGGVTHSGGGMETLRAFLAVGGGGGSXXXXXXXXXXAVGGAQFLLSSKRYRSTRPRSASYVWSRNGVWKDKHALAKVATQPWGGKGKGEGTMTSPSLVGDHLRAATA 441          
BLAST of mRNA_Ecto-sp6_S_contig9.18197.1 vs. uniprot
Match: A0A835YQA2_9STRA (Tub domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 2.680e-5
Identity = 80/341 (23.46%), Postives = 119/341 (34.90%), Query Frame = 0
Query:   22 EPESRDAAALALALRSTLEQARAGQM-SWSDRDALLGWMHKNRKSMPMPCVGLCG---RLENRLSFSFLPGLSWPGHRQEAVPSTAVSAXXXXXXXXXXXXXXXXXXHGSADTVVIRRRNLAGLPP---------PVGKNASEAAEAEAAATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFRLFLQEQRPLAEDGSGGDGGDDSASPTTTSGPATGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMETLRAFLAVGXXXXXXXXXXXXXXGAVGGAQFLLSSKRYRSTKPRSASYVWSRNGVWKDKHALAKVATQP 349
            E E+  +A  A A+   L  A  GQ+ + ++R  LLGW+ +  +   +    L     RL+ RL FS+ PG +W G   EA  + A  A                   G      +   +L   P           VG   S    +EA     +    E+D  FLLQ   +  ++  I+QR+RS +R Y+ + LQEQ  L              +P                                                            L +G                    +FLLS++R R  KP + S++W+ +GVWKDK A+AKV  QP
Sbjct:   24 EKEAGRSADRAAAMVLQLLVASKGQLITHANRQRLLGWVERRTEMADVVTGELSDAITRLKARLDFSYFPGAAW-GSAAEAEAADAARALEAAFG-------------GERRDSRVNSEDLPTTPNGAETDDEQGEVGGVWSAEGSSEAGGLPTLLEGIESDSGFLLQAAHKTTRTCTIVQRSRSRLRCYYNMALQEQIALP-------------TPPPCDNMCINAAAAVSVKFRVCAHLPSPPPAGSHSGPGSETSTPPMSDLSAVGAKRPSLLALRLGPQKDPLMEN----------TRFLLSTRRGRGGKPMAVSHMWNTSGVWKDKQAMAKVTVQP 327          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGZ8_ECTSI1.930e-19089.20Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KJG2_9PHAE9.630e-16072.32Tub domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YQA2_9STRA2.680e-523.46Tub domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1776405..1784362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18197.1mRNA_Ecto-sp6_S_contig9.18197.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1776329..1789477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18197.1 ID=prot_Ecto-sp6_S_contig9.18197.1|Name=mRNA_Ecto-sp6_S_contig9.18197.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=450bp
MSTSKLRRSIASLDAFDCTSIEPESRDAAALALALRSTLEQARAGQMSWS
DRDALLGWMHKNRKSMPMPCVGLCGRLENRLSFSFLPGLSWPGHRQEAVP
STAVSAAAAAAAAAAAAAAAGAAGHGSADTVVIRRRNLAGLPPPVGKNAS
EAAEAEAAATVDVSSLQEADDNFLLQPTPQGLKSYCIIQRTRSTIRTYFR
LFLQEQRPLAEDGSGGDGGDDSASPTTTSGPATGVPGGHGGTPPTTSNST
GLDSGSGGGAFSATGGSASGGVTHSGGGMETLRAFLAVGGGGGGGGGGGA
GGDGAVGGAQFLLSSKRYRSTKPRSASYVWSRNGVWKDKHALAKVATQPW
GGKGKGEGTMTSPSLVGDHLRAATAAAAAAAAAAAASPGPRGTWGRTAAR
LKARRCLVRAAGVVGGRRGGGAEEAQVGRGASVGGLKGSAAARRAGRWW*
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