prot_Ecto-sp6_S_contig9.18175.1 (polypeptide) Ectocarpus species6 EcLAC_371
|
Overview
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: D8LGX6_ECTSI (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX6_ECTSI) HSP 1 Score: 868 bits (2242), Expect = 7.030e-315 Identity = 491/505 (97.23%), Postives = 494/505 (97.82%), Query Frame = 0
Query: 57 MMTYHQHDAITIASSSAAVTGIAERCSAETTYQGEHRVVHIATPGAPPPWQEDEGQGEEQRATIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRCTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEAAARGGEGREEEDGSTAPDAEAATAAEAAREEGDPAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL 561
MMTYHQHDAITIASSSAAVTGIAE CSAETTYQGEHRVVHIATPGAPPPW EDE QGEEQRATIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFR TSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQV DWSKRIVHKN+DFVVVDKPAGVPTVPTIDNGVQNC FQASLAVAG+PPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGP VPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E+EAAARGGEGREEEDGSTAPDAEA TAAEAAREEGD APHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL
Sbjct: 1 MMTYHQHDAITIASSSAAVTGIAEGCSAETTYQGEHRVVHIATPGAPPPWLEDEEQGEEQRATIAELVSHFGAVSRERGVELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVMDWSKRIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPAVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEIEAAARGGEGREEEDGSTAPDAEATTAAEAAREEGDHAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWAL 505
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: A0A835YKX4_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX4_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.790e-54 Identity = 124/354 (35.03%), Postives = 162/354 (45.76%), Query Frame = 0
Query: 207 GAYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEAAARGGEGREEEDGSTAPDAEAATAAEAAREEGDPAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWA 560
G YLR+H PR F + DW R++H D+VV+DKPAGVP+VPT DN + ++A A+ G PLHAVSRLDVCTSG++VFAR AA L+ AR V+K Y ++T G VP G + HCC ++A G +PRIYA FD GD G W+ A VL +G++ + L TGRTHQ+RLQLAA+G+ IVGD+RY ++G+VH G D T FG EPE I L AA +EF+W G V ++ + P WA
Sbjct: 150 GTYLRLHAAPRRFARAAAADWRARVLHACADYVVIDKPAGVPSVPTTDNAADSALWRARAALGG------DAARPLHAVSRLDVCTSGVLVFARSPAAAAALSGAISARAVRKVY-RVVTTGAEVPLGVLRHCCSTRARTGDAQPRIYAPFDAAKACGD--GSGWRLAELEVLSHDRGSGAST------------------------------------------------------------------------------------------ISLMTGRTHQIRLQLAALGAGIVGDSRYADIIGKVHDGTAASDRTDWFGPEPEEIRLHAAALEFDWGGERVCYTAE-PPWA 403
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: A0A5J4Z0G8_PORPP (RNA pseudouridine synthase 6, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0G8_PORPP) HSP 1 Score: 157 bits (398), Expect = 6.650e-39 Identity = 122/359 (33.98%), Postives = 154/359 (42.90%), Query Frame = 0
Query: 207 GAYLRVHCDPRTFPASQVTDWSKRIVHK-NQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPT------GSMAHCCRSKAFDGSRRPRIYA------DFDEELLAGDKW---------GGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEAAARGGEGREEEDGSTAPDAEAATAAEAAREEGDPAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEF 543
G Y R+H +P +P + W RIV+ + DFV VDKP +P+VPT+ N V+ Q A+ P PLHAVSRLDVCTSG++VFARHK AA LNE R R VKKRY LL PGP +P G + H R+ D +PRIY D D LL + + GGAW A +L M+A G + R E +EL TGRTHQLRLQ A++G + GD+RYR V GRVHRG+ DD+ FG EP ++L A+ F
Sbjct: 141 GMYFRLHANPARYPDAHAYVWKDRIVYNGDNDFVAVDKPPNLPSVPTLVNVVECARTQVECAL--------ECPAPLHAVSRLDVCTSGVLVFARHKRAAAHLNEQIRNRSVKKRY-TLLVPGP-IPREIIQKDGRVLHAARTNLPDNIPKPRIYRLLDLEKDLDAALLQDESYSTPLEAPKIGGAWHVAAMRILT------------------------------------------EREMNRAELSEVVTMQADHAGIDVRYTE---------------------------YEVELLTGRTHQLRLQFASLGLPLFGDSRYRPVSGRVHRGVPEDDNLDMFGPEPNRVSLCASVFHF 420
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: D7G898_ECTSI (Ribosomal large subunit pseudouridine synthase D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G898_ECTSI) HSP 1 Score: 139 bits (351), Expect = 2.490e-34 Identity = 78/109 (71.56%), Postives = 83/109 (76.15%), Query Frame = 0
Query: 260 CAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAHCCRSKAF-DGSRRPRIYADFDEELLAGDKW 367
C QASLAVAGI PGSRSLPPPLHAVSRLDVCTSG+VVFARHK+A KQLNELFRARRVKKRYLALLTPGPPV TGSM R+ G RR +EE D+W
Sbjct: 71 CFQQASLAVAGISPGSRSLPPPLHAVSRLDVCTSGVVVFARHKDATKQLNELFRARRVKKRYLALLTPGPPVSTGSMVRWRRAWGLVRGLRRKNWRRRREEER---DEW 176
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: A0A8J9RE80_9CHLO (Probable mitochondrial RNA pseudouridine synthase Rpusd4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RE80_9CHLO) HSP 1 Score: 105 bits (263), Expect = 1.070e-20 Identity = 57/131 (43.51%), Postives = 76/131 (58.02%), Query Frame = 0
Query: 208 AYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAH 338
AY+RVH P+ FP + DW RIVH QDFVV++KPAGVP VPT+DN +++C + A+ G S PL + RLD CT G+VV R ++ NEL R +++ LT PP PTG+ H
Sbjct: 127 AYVRVHVHPKRFPNAYKVDWKARIVHAAQDFVVINKPAGVPVVPTVDNILESCLACTAQAL-----GESS---PLLSTHRLDTCTEGLVVLGRKRDFVAAFNELLRLPGAVQKFYRALTKSPP-PTGASVH 248
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: A0A7S0H4S4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H4S4_9CRYP) HSP 1 Score: 101 bits (252), Expect = 1.900e-20 Identity = 61/178 (34.27%), Postives = 96/178 (53.93%), Query Frame = 0
Query: 207 GAYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAHC-CRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAP 383
G+Y+RVH P+ F DW+ R++ +++DF+V++KP GVP++ TIDN ++ C + I SL P SRLDVCT+G+++FA+ +E N+ RR +K Y LL+ G V TG++ H CR + + RP + + + D WQ+A +L C P
Sbjct: 90 GSYVRVHAQPKRFLTVYKMDWNARVICESEDFIVINKPPGVPSLTTIDNAIE-CVMSQVEKIKNI-----SLMP----TSRLDVCTAGVLIFAKTREFCMSTNKAMSERRSEKIY-KLLSEGE-VQTGTVRHLFCRKRKGHKNSRPTLLRAWQDLTSRKDLQEEGWQDAVLEILDCRP 255
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: L1JPX0_GUITC (PseudoU_synth_2 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPX0_GUITC) HSP 1 Score: 101 bits (251), Expect = 4.560e-20 Identity = 103/406 (25.37%), Postives = 152/406 (37.44%), Query Frame = 0
Query: 137 ELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRCTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEAAARGGEGREEEDGSTAPDAEAATAAEAAREEGDPAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGL--RVDDDTSRFGQEPEAIALQAAR 540
ELVKFG+VY G D +KQ + A R ++ + P G+Y+RVH P+ + DWS R++ ++QDF+V+DKP GVP++ TIDNGV+ C + I SL P SRLDVCT+G+++FA+ ++ + N+ RR K YL L + R D EE WQ+A +L C + +GG + E ++ L TGRTHQ+RLQ AA+G+ ++GDTRY G + + + + D + FG +P+ I LQA R
Sbjct: 24 ELVKFGAVYTGPPQDA------MDKKQSPVKAVR--TMQDVELLP-------------------------GSYVRVHAQPKRCLSVYKIDWSARVIRESQDFIVIDKPPGVPSLTTIDNGVE-CVMSQVEKMRNI-----SLMP----TSRLDVCTAGVLIFAKTRDFCLKTNKAMSERRCDKVYLLL----------------SERELPRGEDLRSRQDLQEE---------GWQDAVLEILDCR----------------------------------------------CLLTFLQPFDLKQQGGRRKVFE---------------------------YSVRLITGRTHQIRLQFAALGAPVLGDTRYTPAAGLLFQSVDDAIGDGSRVFGPDPDVIFLQARR 288
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: A0A7S0TTK8_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TTK8_HEMAN) HSP 1 Score: 97.8 bits (242), Expect = 2.010e-19 Identity = 59/152 (38.82%), Postives = 80/152 (52.63%), Query Frame = 0
Query: 205 PHGAYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQN---CAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRI 353
P G+YLRVH PR FP + DW KR+VH N ++V+V+KP G+P ++DN + CA +A A G + A+ RLDV T G++ R A + L R RRV+K YLAL + P + GSM H R R PR+
Sbjct: 93 PQGSYLRVHPSPRRFPVAWTADWQKRLVHVNSNYVIVNKPGGLPCHASLDNAKETTEACAERALSAEVGS----------ISALHRLDVPTHGLMCLGRTPFFAAHFSRLLRMRRVRKEYLALASAPPQL--GSMVHYMRPS----ERSPRV 228
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: A0A1Y1HRB5_KLENI (PseudoU_synth_2 domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HRB5_KLENI) HSP 1 Score: 98.6 bits (244), Expect = 1.950e-18 Identity = 71/223 (31.84%), Postives = 107/223 (47.98%), Query Frame = 0
Query: 137 ELVKFGSVYIGEVVDTNWRHPPSKEKQMTIAAARKKALKSADQAPFRCTSFE---HMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAHCCRSKAFDGSRRPRIYAD 356
+L+KFG+V+ ++ PP + + + K++D+ +S MR+ RL + G YLRVH P+ FP DW R++ + D+V++DKPAGVP T+DN V+NCA A+ L PL RLDV T G +V A+ + N+L R+V K Y AL PP+ G + H + K++ PRI +D
Sbjct: 66 DLIKFGAVHYAPLLPP----PPPNSRPSVHSQWSESTAKASDEFGLHPSSQALKLMMRVGRLQ--DPFRLLRQGGYLRVHVHPKRFPRCYEVDWRGRVLTETPDYVILDKPAGVPVQGTVDNLVENCAACLLEALG--------LEEPLKVTHRLDVGTEGCLVLAKTPAFLRSFNQLLADRKVHKTYRALAAARPPL--GRLLHWTQPKSY----APRILSD 268
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Match: I0Z0I0_COCSC (Pseudouridine synthase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z0I0_COCSC) HSP 1 Score: 96.7 bits (239), Expect = 1.160e-17 Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = 0
Query: 208 AYLRVHCDPRTFPASQVTDWSKRIVHKNQDFVVVDKPAGVPTVPTIDNGVQNCAFQASLAVAGIPPGSRSLPPPLHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPPVPTGSMAH 338
AY+RVH P+ FP++ DW RIVH DFVV++KPAGVP VPT+DN +++C + A+ P L + RLD CT G+VV R E N+L ++Y LT P PTG + H
Sbjct: 121 AYVRVHVHPKRFPSAYKVDWKARIVHAAPDFVVINKPAGVPVVPTVDNILESCLACTAQALDEASP--------LLSTHRLDTCTEGLVVLGRKYEFVAAFNKLLGQPGALQKYYRALTKQAP-PTGGLVH 242 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp6_S_contig9.18175.1 ID=prot_Ecto-sp6_S_contig9.18175.1|Name=mRNA_Ecto-sp6_S_contig9.18175.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=562bpback to top |