prot_Ecto-sp6_S_contig9.18123.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18123.1
Unique Nameprot_Ecto-sp6_S_contig9.18123.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length326
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18123.1 vs. uniprot
Match: D8LLX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX4_ECTSI)

HSP 1 Score: 549 bits (1414), Expect = 8.510e-196
Identity = 304/325 (93.54%), Postives = 308/325 (94.77%), Query Frame = 0 
Query:    1 MSVSGADKDKSTTVVEEDGYLLWLSDDDINSTAGEIQAIYQASVIEAELGTSVPHSTASRQPSTAVAIVQSIKAMQQQLVDVSLNRVIPVASDAGMARYRGAVEKFEASQKALTTVAVSLNAAQRDALKASDEVIEAAREAFGEDPEASSDSASGSAQMNQSASLSQEKRSSPCLLTQEVRQANLRLARVEQQLAVINVCSDSNADRYPPTSSNVAAASKRLRRLLQRHLRVTEKENSATRAAASDGAYAKLTVHGYHQNAQVLVDTYRCSGSACRVFSLIREYKRFAAQKAKKDASVVTHLHNVAASRYGSLLAEREEFKGVLW 325
            MSVSGADKDKSTTVVEEDGYLLWLSDDDINSTAG      QASVIEAE GTSVPHSTASR PST+VAIVQSIKAMQQQLVDVSLN  IPVASDA MARYRGAVEKFEASQKALTTVAVSLNAAQRDALKASD+VIEAAREAFGEDPEASSDSASGSAQMN SASLSQEKRSSPC LTQEVRQANLRLARVEQQLAVINVCS SN DRYPPTS NVAAASKRL RLLQRHLRVTEKENSATRAAASDGAYAKLTVHGYHQNAQVLVDTYRCSGSACRVFSL+REYKRFAAQKAKKDASVVTHLHN+AASRYGSLLAEREEFKGVLW
Sbjct:    1 MSVSGADKDKSTTVVEEDGYLLWLSDDDINSTAGTAD---QASVIEAESGTSVPHSTASRPPSTSVAIVQSIKAMQQQLVDVSLNGAIPVASDAVMARYRGAVEKFEASQKALTTVAVSLNAAQRDALKASDDVIEAAREAFGEDPEASSDSASGSAQMNPSASLSQEKRSSPCSLTQEVRQANLRLARVEQQLAVINVCSGSNTDRYPPTSPNVAAASKRLGRLLQRHLRVTEKENSATRAAASDGAYAKLTVHGYHQNAQVLVDTYRCSGSACRVFSLVREYKRFAAQKAKKDASVVTHLHNMAASRYGSLLAEREEFKGVLW 322
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLX4_ECTSI8.510e-19693.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1155481..1157889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18123.1mRNA_Ecto-sp6_S_contig9.18123.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1155067..1157889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18123.1 ID=prot_Ecto-sp6_S_contig9.18123.1|Name=mRNA_Ecto-sp6_S_contig9.18123.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=326bp
MSVSGADKDKSTTVVEEDGYLLWLSDDDINSTAGEIQAIYQASVIEAELG
TSVPHSTASRQPSTAVAIVQSIKAMQQQLVDVSLNRVIPVASDAGMARYR
GAVEKFEASQKALTTVAVSLNAAQRDALKASDEVIEAAREAFGEDPEASS
DSASGSAQMNQSASLSQEKRSSPCLLTQEVRQANLRLARVEQQLAVINVC
SDSNADRYPPTSSNVAAASKRLRRLLQRHLRVTEKENSATRAAASDGAYA
KLTVHGYHQNAQVLVDTYRCSGSACRVFSLIREYKRFAAQKAKKDASVVT
HLHNVAASRYGSLLAEREEFKGVLW*
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