prot_Ecto-sp6_S_contig9.18121.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18121.1
Unique Nameprot_Ecto-sp6_S_contig9.18121.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length257
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 2.000e-162
Identity = 237/257 (92.22%), Postives = 241/257 (93.77%), Query Frame = 0
Query:    1 MMLVAPLVRAATR-QCVQQQGTSCRRRLPSTVGAVPGLACRRWLGDSSSDTPQPPSSAAAATDGRTWTWSTPSPNRPGRGGAEIAVIPRHDTPHLQQQAVLMVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGYVEDPVDWEEDFGQESAKAAGRGIIDENR 256
            MMLVAPLVRAATR QCVQQQGTSCRRRLPSTVGAVPGLACRRWL DSSSDTP+PPSSAAAATDGRTWTWSTPSPNRPGRGGAEIAVIPR             VNLTV+EVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVF TAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEG+VEDPVDWEEDFGQE+AKAAGRGIIDENR
Sbjct:    1 MMLVAPLVRAATRRQCVQQQGTSCRRRLPSTVGAVPGLACRRWLSDSSSDTPRPPSSAAAATDGRTWTWSTPSPNRPGRGGAEIAVIPR-------------VNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGHVEDPVDWEEDFGQEAAKAAGRGIIDENR 244          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 134 bits (336), Expect = 4.420e-34
Identity = 73/153 (47.71%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   59 AATDGRTWTWSTPSPNRPGRGGAEIAVIPRHDTPHLQQQAVLMVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 211
            +A   R+WTWS+ +P + G G A+I V P+             V LTV EVV A+E  GGTD+R + L GK + + D M+F T  +   M+RL++++  ALK+RKL +A GITGAEG DCDDWM+VDC NLIVH   A+ R+EL+LE  WE +
Sbjct:   73 SAVKARSWTWSSNAPRKAG-GSADIDVKPK-------------VPLTVGEVVTALENNGGTDIRVVHLAGK-SDLADAMIFCTGRSMRHMQRLSDVITYALKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENI 210          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.210e-25
Identity = 66/173 (38.15%), Postives = 93/173 (53.76%), Query Frame = 0
Query:   62 DGRTWTWSTPSPNRPGRGGAEIAVIPRHDTPHLQQQAVLMVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGYVEDPVD 234
            +G +W W  P+       G +I V+PR               LTVEEV  A+E   G  V  +D+ GK       MVF T      MRR+A+++V ALK+RK + A G +GAEG DCDDWM+VD  N+IVH M  +AR+ LDLE HW+   +    G    +  E ++E+ ++
Sbjct:   67 EGLSWNWEPPAVVEQQAAGYQIPVVPRK-------------YLTVEEVTTALEELRGMQVAVVDVTGKLEETSS-MVFCTGLGRTHMRRMADVLVSALKKRK-IKAPGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHWKNPEATLPQGGTESQ-REAHIEELIE 223          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.910e-23
Identity = 49/116 (42.24%), Postives = 79/116 (68.10%), Query Frame = 0
Query:   98 AVLMVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVAS 213
            AV    LT++EV +A+E +   DV  +DL GK + + D+MVF+T  +   MRR+A+++++++K R++V+     G EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE + +
Sbjct:   71 AVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 184          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL)

HSP 1 Score: 104 bits (259), Expect = 9.130e-23
Identity = 49/108 (45.37%), Postives = 77/108 (71.30%), Query Frame = 0
Query:  104 LTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 211
            L+++EV KA+E +   DV  +DL GK +G+ ++MVF T  +   MRR+A++++++LK R++V+     G EG DCDDWM+ DC+N++VHFM A+ R+ L LE HWE +
Sbjct:  158 LSLDEVQKALEREKAIDVYTVDLSGK-SGLANYMVFVTGRSQAHMRRMADLLIKSLKAREIVDDFDY-GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWENM 263          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A8K1CVN1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVN1_PYTOL)

HSP 1 Score: 104 bits (260), Expect = 1.550e-22
Identity = 61/156 (39.10%), Postives = 92/156 (58.97%), Query Frame = 0
Query:   56 SAAAATDGRTWTWSTPSPNRPGRGGAEIAVIPRHDTPHLQQQAVLMVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 211
            S+A A DG T  W  P     G+  AEI  IP           V    LT++EV++A+E +   DV  ++L GK + + D+M+F+T  +   MRR+A+M++Q++K R L +       EG DCDDWM+ DC+N++VHFM  + R+ L+LE HWE +
Sbjct:  181 SSAFAMDGATSEWEVPDV---GKRNAEI--IP----------PVAGQYLTIDEVLEALEREKAIDVYTVNLTGKSS-LADYMIFTTGRSQAHMRRMADMMIQSMKARNLSDDFDYA-VEGRDCDDWMIADCNNVVVHFMREDTRRILNLEDHWENM 319          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A3R7GIQ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GIQ2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.570e-22
Identity = 49/116 (42.24%), Postives = 79/116 (68.10%), Query Frame = 0
Query:   98 AVLMVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVAS 213
            AV    LT++EV +A+E +   DV  +DL GK + + D+MVF+T  +   MRR+A+++++++K R++V+     G EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE + +
Sbjct:  187 AVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 300          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A2D4BP62_PYTIN (Iojap-like ribosome-associated protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP62_PYTIN)

HSP 1 Score: 102 bits (255), Expect = 2.260e-22
Identity = 48/106 (45.28%), Postives = 74/106 (69.81%), Query Frame = 0
Query:  104 LTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE 209
            LT++EV+ A+E +   DV  +DL GK + + DFMVF+T  +   MRR+A+M++Q++K R + +    +  EG DCDDWM+ DC+N++VHFM  + R+ L+LE HWE
Sbjct:  125 LTLDEVLAALEREKAIDVYTVDLAGKSS-LADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYS-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHWE 228          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: H3GI95_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GI95_PHYRM)

HSP 1 Score: 102 bits (254), Expect = 4.670e-22
Identity = 47/106 (44.34%), Postives = 76/106 (71.70%), Query Frame = 0
Query:  104 LTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWE 209
            LT++EV++A+E +   DV  +DL GK + + DFMVF+T  +   MRR+A+++++++K R++V+    +  EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE
Sbjct:  156 LTIDEVMEALEKEKAIDVYTVDLAGKSS-LADFMVFATGRSQAHMRRMADLLIKSMKVRQIVDDFDYS-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEEHWE 259          
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Match: A0A329SL63_9STRA (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A329SL63_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.070e-22
Identity = 48/114 (42.11%), Postives = 77/114 (67.54%), Query Frame = 0
Query:   98 AVLMVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETV 211
            A+    LT++EV +A+E +   DV  +DL GK + + DFMVF+T  +   MRR+A+++++++K R++V+       EG DCDDWM+ DC+N++VH M A+ R+ L LE HWE +
Sbjct:  156 AIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSS-LADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYA-VEGRDCDDWMIADCNNIVVHLMRADTRRILALEDHWENM 267          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI2.000e-16292.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA4.420e-3447.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5J7_9STRA6.210e-2538.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3F2RH48_9STRA1.910e-2342.24Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0P1A703_PLAHL9.130e-2345.37Iojap-like ribosome-associated protein n=1 Tax=Pla... [more]
A0A8K1CVN1_PYTOL1.550e-2239.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7GIQ2_9STRA1.570e-2242.24Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A2D4BP62_PYTIN2.260e-2245.28Iojap-like ribosome-associated protein n=1 Tax=Pyt... [more]
H3GI95_PHYRM4.670e-2244.34Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A329SL63_9STRA5.070e-2242.11Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.460.10coord: 102..218
e-value: 4.9E-22
score: 79.8
NoneNo IPR availablePFAMPF02410RsfScoord: 107..208
e-value: 4.7E-21
score: 75.1
NoneNo IPR availablePANTHERPTHR21043:SF0MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1coord: 103..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 9..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..256
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 106..209
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 106..208
e-value: 6.6E-17
score: 59.5
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 103..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:1136376..1140128 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18121.1mRNA_Ecto-sp6_S_contig9.18121.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 1135334..1140128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18121.1 ID=prot_Ecto-sp6_S_contig9.18121.1|Name=mRNA_Ecto-sp6_S_contig9.18121.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=257bp
MMLVAPLVRAATRQCVQQQGTSCRRRLPSTVGAVPGLACRRWLGDSSSDT
PQPPSSAAAATDGRTWTWSTPSPNRPGRGGAEIAVIPRHDTPHLQQQAVL
MVNLTVEEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFSTAATPLQMRR
LANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQ
ELDLETHWETVASGTALGSKRKKGEEGYVEDPVDWEEDFGQESAKAAGRG
IIDENR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004394Iojap/RsfS/C7orf30