prot_Ecto-sp6_S_contig9.18101.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18101.1
Unique Nameprot_Ecto-sp6_S_contig9.18101.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length274
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18101.1 vs. uniprot
Match: D8LLZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ3_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 5.430e-132
Identity = 218/273 (79.85%), Postives = 223/273 (81.68%), Query Frame = 0 
Query:    1 MKRILACLLVTSAATGGMAFQLMASSSSSRAPTQMKASSSESVSRRALLEKASVAAVAGAVALTGVAGEASAGTARPSARNLAETSIELNGSGKQPISVSVLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFFTDALFSLDGPYGTFGKVDDFKVIGAKSESKGKRDYRRGSGVVVAMLMYVDLKFSAPTQGLLQVEKRGCVATTIVNGDVVLFTASVLASRWPKISPVVGEMIESFRADVAQKTPDPSSFAFNRR 273
            MKR+LACLLVTSAATGGMAFQLMASSSSSRAPTQMKAS+SESVSRRALLEKASVAAVAGAVALTGVAGEASAGTARPSARNLAETSIELNGSG+QPI+VSVLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFFTDALFSLDGPYGTFGKVDDFKVIGAKSE+KGKRDYR           YVDLKFSAPTQGLLQ                                       ESFRADVAQKTPDPSSFAFNRR
Sbjct:    1 MKRVLACLLVTSAATGGMAFQLMASSSSSRAPTQMKASASESVSRRALLEKASVAAVAGAVALTGVAGEASAGTARPSARNLAETSIELNGSGQQPIAVSVLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFFTDALFSLDGPYGTFGKVDDFKVIGAKSEAKGKRDYR-----------YVDLKFSAPTQGLLQ---------------------------------------ESFRADVAQKTPDPSSFAFNRR 223
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BLAST of mRNA_Ecto-sp6_S_contig9.18101.1 vs. uniprot
Match: A0A7S0LSG3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSG3_9EUKA)

HSP 1 Score: 86.3 bits (212), Expect = 3.080e-16
Identity = 55/162 (33.95%), Postives = 85/162 (52.47%), Query Frame = 0 
Query:   99 VSVLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFFTDALFSLDGPYGTFGKVDDFKVIGAKSE-----SKGKRDYRRGSGVVVAMLMYVDLKFSAPTQGLLQVEKRGCVATTIVNGDVVLFTASVLASRWPKISPVVGEMIESFR 255
            VS  +P  WT+    G +I+++D++ +D AF L+  LP G K+   +  SFF   +F   G YG++G VDD KV+ +        S GK+ YRR           + LKFS  T     VE+R  ++ + V G V +  A  LA+R+ K+ P +  + +SFR
Sbjct:  114 VSFAFPPAWTLA--GGPNIDVRDVRESDSAFLLSAKLPEG-KTFEQLHDSFFLSVVFDPQGKYGSYGTVDDRKVLSSDLAALTLPSGGKQTYRR-----------LALKFSPLTYNGNTVERRALLSCSSVGGSVFILVAGSLATRYKKVQPELASIQDSFR 261
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BLAST of mRNA_Ecto-sp6_S_contig9.18101.1 vs. uniprot
Match: A0A6H5KNY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY8_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 9.900e-14
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0 
Query:    1 MKRILACLLVTSAATGGMAFQLMASSSSSRAPTQMKASSSESVSRRALLEKA 52
            MKR+LA LLV SAATGGMAFQLMASSS SR+PTQMKAS+SE +SRRALLEKA
Sbjct:    1 MKRVLARLLVISAATGGMAFQLMASSSRSRSPTQMKASASEIISRRALLEKA 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLZ3_ECTSI5.430e-13279.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0LSG3_9EUKA3.080e-1633.95Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A6H5KNY8_9PHAE9.900e-1484.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..273
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.714

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:977908..985154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18101.1mRNA_Ecto-sp6_S_contig9.18101.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 977908..985603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18101.1 ID=prot_Ecto-sp6_S_contig9.18101.1|Name=mRNA_Ecto-sp6_S_contig9.18101.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=274bp
MKRILACLLVTSAATGGMAFQLMASSSSSRAPTQMKASSSESVSRRALLE
KASVAAVAGAVALTGVAGEASAGTARPSARNLAETSIELNGSGKQPISVS
VLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFF
TDALFSLDGPYGTFGKVDDFKVIGAKSESKGKRDYRRGSGVVVAMLMYVD
LKFSAPTQGLLQVEKRGCVATTIVNGDVVLFTASVLASRWPKISPVVGEM
IESFRADVAQKTPDPSSFAFNRR*
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