prot_Ecto-sp6_S_contig9.18086.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18086.1
Unique Nameprot_Ecto-sp6_S_contig9.18086.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length173
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: D8LM03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM03_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 1.870e-117
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0
Query:    1 MDQPSWMQNTGQAAAPPGTSSGGAPAQQNAGSRSGDATVVRSVFHFVNIGVAVMMAASAAFGLIDFRNFENVVLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPEWFEVPKPAQNTSV 172
            MDQPSWMQNTGQAAAPPGTSSGGAPAQQNAGSRSGDATVVRSVFHFVNIGVAVMMAASAAFGLIDFRNFENVVLS+YLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPEWFEVPKPAQNTSV
Sbjct:    1 MDQPSWMQNTGQAAAPPGTSSGGAPAQQNAGSRSGDATVVRSVFHFVNIGVAVMMAASAAFGLIDFRNFENVVLSVYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPEWFEVPKPAQNTSV 172          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A836CK83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK83_9STRA)

HSP 1 Score: 136 bits (343), Expect = 8.330e-38
Identity = 82/169 (48.52%), Postives = 107/169 (63.31%), Query Frame = 0
Query:    1 MDQPSWMQN--TGQAAAPPGTSSGGAPAQQNAGSRSGDATVVRSVFHFVNIGVAVMMAASAAFGLIDFRNFENV--VLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPEWFEVPK 165
            MDQPSWMQ+  TG A A P  +S    A  ++G  +G   +VR+ FHFVNIG+ V+MA SA  G+I+  N + V   L +YL  FAVLLF YE +R + N     ++M +NFG+F+G  GRG YL+FVGFLNF L  T+   TG+V LGWG L +     +PEWF V K
Sbjct:    1 MDQPSWMQDGATGGAPAAPAAASTRPAAAVDSGGSTG--AIVRNGFHFVNIGLCVLMAFSAVLGVIEITNAQVVDFFLGVYLFFFAVLLFSYEVLRWVPNANLD-EMMRRNFGWFYGNMGRGFYLIFVGFLNFGLHGTVPLATGIVCLGWGALCIAVGFYKPEWFAVEK 166          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A7S2UC71_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UC71_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 7.260e-14
Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 0
Query:   17 PGTSSGGAPAQQ------NAGSRSGD--ATVVRSVFHFVNIGVAVMMAASAAFGLIDF-----RNFENVVLSIYLMIFAVLLFMYEFV--RVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPL-----DLTLSFWTGVVTLGWGVLTVLAYMTRPE 159
            PG+++  AP Q+      N GS  G   + ++  +   +NIG++ MM A    G++DF      ++ +  ++ Y+++FAVLLF YE +  + +G      Q + KNFGF +G KG+GLYL+F+ FL   L     ++ L + TG+  +  G L +     +PE
Sbjct:    2 PGSTTAAAPTQEITGDSFNQGSNGGSDRSGLILVLMSMLNIGLSAMMVALGVLGILDFDGKGVEDYSDAFIAGYMIVFAVLLFAYECMWWKAIGPIN---QSLRKNFGFMYGLKGKGLYLIFISFLTIGLSDESENVELQWATGISYMAAGFLHLFVVFAKPE 161          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A7S4A8Z0_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8Z0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.860e-11
Identity = 46/141 (32.62%), Postives = 70/141 (49.65%), Query Frame = 0
Query:   29 NAGSRSGDATVVRSVFHFVNIGVAVMMAASAAFGLID-----FRNFENVVLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLD-----LTLSFWTGVVTLGWGVLTVLAYMTRPE 159
            N G   G +  +  +    NIG+A +M       +I        +     L+ Y+++FAVLLF+YE +      ++  + M KNFGF +G +G+GLYL+FV FL F L        L++ TG   L  G+L +     RPE
Sbjct:   35 NGGGSKGKSNCLLGLLSVFNIGLAALMTVLGVLTIIQVHLTGINDLSEPFLAFYMILFAVLLFLYELMW-WSPMKKLNKDMRKNFGFMYGLRGKGLYLIFVAFLCFGLGKDAKVAILNYCTGASFLAGGLLHMFVIFFRPE 174          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.630e-10
Identity = 36/113 (31.86%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   47 VNIGVAVMMAASAAFGLIDFRNFENVVLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPE 159
            +N+G+ V+++A+A   LI   NF+ +VL++YL  FA +L  +E      +      +   NFGF + AKGR L+L+FVG L F     L + +G+  +   +      +  PE
Sbjct:    8 INMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFE-----THISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE 115          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: B7G112_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G112_PHATC)

HSP 1 Score: 65.9 bits (159), Expect = 4.270e-10
Identity = 47/137 (34.31%), Postives = 67/137 (48.91%), Query Frame = 0
Query:   42 SVFHFVNIGVAVMMAASAAFGLIDFR-----NFENVVLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLD-------LTLSFWTGVVTLGWGVLTVLAYMTRPEWFEVPKP 166
            S+  F+N G+A MM       LI F      ++    LS Y++IFAV+LF+YE +         K +   NFGF +G +G+GL+LVF+ FL   L          L + TG+  LG G   +  +MT  E     KP
Sbjct:   51 SLLSFLNFGLAAMMGTLGVLSLIHFNPGSSSDYSAAFLSSYMVIFAVILFLYELIWWTPIAALNK-MFRMNFGFMYGLRGKGLFLVFIAFLCLGLRDENASGVKGLDWATGLAWLGAGCFNIFIWMTWSEASAAYKP 186          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A7S1GLT3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GLT3_CYCTE)

HSP 1 Score: 64.7 bits (156), Expect = 1.010e-9
Identity = 41/123 (33.33%), Postives = 69/123 (56.10%), Query Frame = 0
Query:   47 VNIGVAVMMAASAAFGLIDFRNF-----ENVVLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFL-----NFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPE 159
            ++IG++++MA+     ++ F+ F         L+ Y++IFA+LLF YE +          + + KNFGF +G +G+GLYL+FV FL     + P    +++ TG+  L  GVL +L    +PE
Sbjct:   54 IDIGLSLLMASLGVLTILSFKTFAARDISEGFLAGYMIIFALLLFAYE-IMWWSAIPSINKSLRKNFGFLYGLRGKGLYLIFVAFLCLGLGSDPAVTAVTYATGIAFLTVGVLHLLVAFCQPE 175          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A6S9AF71_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9AF71_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.410e-9
Identity = 56/174 (32.18%), Postives = 82/174 (47.13%), Query Frame = 0
Query:    3 QPSWMQNTGQAAAPPGTSSGGAPAQQNAGSRS---GDATVVRSVFHFVNIGVAVMMAASAAFGLI----DFRNFENVVLSIYLMIFAVLLFMYEFVRVMGNCERP--KQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSF----WT-GVVTLGWGVLTVLAYMTRPEWFE 162
            +P+W    G  AA     S  AP+ Q    ++   G +  V+ +    NI ++ +MAA     +I    D  +F    +S+Y++IFA+LL  YE   +M     P     + KNFGF +G KG+  YL+FV FL   L     F    WT G+  L  GV  +    TRP+  E
Sbjct:    5 EPAWASTGGDKAATTSIPSSAAPSAQPNSYQAPGRGCSGCVQRMLSVANISLSALMAALGVLTIIEVGADVSDFARTFVSVYMIIFALLLAFYE---LMWWVPIPFINMNLRKNFGFMYGIKGKAAYLIFVAFLTIGLGSEQRFKWLQWTTGISFLAIGVFHIFLVCTRPDLVE 175          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A8J2SGE7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGE7_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.320e-9
Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 0
Query:   43 VFHFVNIGVAVMMAASAAFGLIDFR-NFENVVLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDL-TLSFWTGVVTLGWGVLTVLAYMTRPEWF 161
            VF  +N+ + VMMAA+ A G+ + R  F   ++ +Y++  A L F YE V  +  C     +  +NFGFF+ A G+ L+++F+G L F ++  +L   TG+     G L +L ++  P  +
Sbjct:   42 VFRVINMILCVMMAATGAIGIKEMRYEFLGDLVPLYIIALAALWFCYE-VNTIRPCPPITGLYKRNFGFFYNALGKALFIIFMGLLCFGVEAGSLGIITGLAVAIDGALLILLFLKYPHMY 161          
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Match: A0A7S2W1J8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1J8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.030e-9
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 0
Query:   51 VAVMMAASAAFGLID------FRNFENVVLSIYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLT----LSFWTGVVTLGWGVLTVLAYMTRPEWFE 162
            +AV M A    G +         N   V +  Y+++F++LLF YE +  + +     +I+ KNFGF +G KG+GLYL+FV FL   LD      L ++TGV  L  G+L +     RPE  E
Sbjct:   60 LAVCMCALGVLGFLSSLKSSSIVNASEVFICFYMVMFSLLLFTYELMWWI-SVPTINRIVRKNFGFMYGFKGKGLYLIFVAFLCVGLDNGGEEWLRYFTGVAFLSGGILHLFLVCFRPEIVE 180          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LM03_ECTSI1.870e-11799.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK83_9STRA8.330e-3848.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UC71_9STRA7.260e-1431.90Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4A8Z0_9STRA2.860e-1132.62Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A836CFZ2_9STRA1.630e-1031.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B7G112_PHATC4.270e-1034.31Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1GLT3_CYCTE1.010e-933.33Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6S9AF71_9STRA1.410e-932.18Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A8J2SGE7_9STRA2.320e-932.23Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2W1J8_9STRA7.030e-936.07Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 43..150
e-value: 1.3E-9
score: 38.2
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 21..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 96..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..75
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 134..156
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:893695..899426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18086.1mRNA_Ecto-sp6_S_contig9.18086.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 893611..900768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18086.1 ID=prot_Ecto-sp6_S_contig9.18086.1|Name=mRNA_Ecto-sp6_S_contig9.18086.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=173bp
MDQPSWMQNTGQAAAPPGTSSGGAPAQQNAGSRSGDATVVRSVFHFVNIG
VAVMMAASAAFGLIDFRNFENVVLSIYLMIFAVLLFMYEFVRVMGNCERP
KQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLT
VLAYMTRPEWFEVPKPAQNTSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15