prot_Ecto-sp6_S_contig9.18075.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig9.18075.1
Unique Name	prot_Ecto-sp6_S_contig9.18075.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	596

Homology

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BLAST of mRNA_Ecto-sp6_S_contig9.18075.1 vs. uniprot
Match: D8LM12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12_ECTSI)

HSP 1 Score: 919 bits (2376), Expect = 0.000e+0
Identity = 545/602 (90.53%), Postives = 549/602 (91.20%), Query Frame = 0

Query:    1 MDEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEE-IAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQXXXXXXXXXXXXXXXDVRLAASLFLLAYALLCSALATRVIXXXXXXXXXXXXXXXXX------MTRSNSGGSTGSRSDLVIRAISSYGVTAAQASDAAXXXXXXXAGEVEASSTPSCGGGRNTSYREGGGDGADVGPSNSTKVGDGGGERGAAPLAAXXXXXXXXXXXXXEEAAGGEDARRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGGRATAAAXXXXXXXXXXXXXSRPGXGYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGGLLEPLVPTGDSAVL 595
            MDEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEE +AQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQ               DVRLAASLFLLAYALLCSALATRVI      XXXXXXXXXXX      +TRSNSGGSTGSRSDLVIRAISSYGVTAAQASDAAXXXXXXX G+VEASSTPSCGGGRNTSYREGGGD ADVGPSNSTKVGDGGGERGAAPLA XXXXXXXXXXXXX  AAGGEDARRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNG      A             SRPG GYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGGLLEPLVPTGD+AVL
Sbjct:    1 MDEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEEMLAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQGGRGGDGEEDDVV--DVRLAASLFLLAYALLCSALATRVIGGTVAAXXXXXXXXXXXXXXXXXLTRSNSGGSTGSRSDLVIRAISSYGVTAAQASDAAXXXXXXXXGDVEASSTPSCGGGRNTSYREGGGDVADVGPSNSTKVGDGGGERGAAPLAXXXXXXXXXXXXXX--AAGGEDARRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNG------AGGAVNDSVGGALGSRPGGGYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGGLLEPLVPTGDTAVL 592

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig9.18075.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig9.18075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LM12_ECTSI	0.000e+0	90.53	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 435..496
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 378..395
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 517..535
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 146..218
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 246..377
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 44..54
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 554..595
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 415..434
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 219..245
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 536..553
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 77..124
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 497..516
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 125..145
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..76
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 396..414
None	No IPR available	TMHMM	TMhelix		coord: 412..434
None	No IPR available	TMHMM	TMhelix		coord: 165..187
None	No IPR available	TMHMM	TMhelix		coord: 531..553
None	No IPR available	TMHMM	TMhelix		coord: 378..397
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 123..145
None	No IPR available	TMHMM	TMhelix		coord: 58..77
None	No IPR available	TMHMM	TMhelix		coord: 497..516

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig9	contig	Ecto-sp6_S_contig9:801204..806885 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig9.18075.1	mRNA_Ecto-sp6_S_contig9.18075.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig9 801204..806885 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18075.1 ID=prot_Ecto-sp6_S_contig9.18075.1|Name=mRNA_Ecto-sp6_S_contig9.18075.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=596bp
MDEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNE
DSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTD
VVGFAWINVAEEIAQVFEVRAKTTLVYAALAFAASLGAMELGSLARSLLD
WPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQGGRGGG
GGGEEDDVVDVRLAASLFLLAYALLCSALATRVIGGTVAASAVVVGGGGG
GMTRSNSGGSTGSRSDLVIRAISSYGVTAAQASDAAAAASADAAGEVEAS
STPSCGGGRNTSYREGGGDGADVGPSNSTKVGDGGGERGAAPLAAAAAAA
AAEAEAEVEEAAGGEDARRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEF
RQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGGRAT
AAAGGAVNDSVGGALGSRPGGGYFHVERPEEDGEETRRRDAAVRSYHARR
LLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVV
VLGREVRRAGRRDAGGGDLHDHNGAGEGGGGLLEPLVPTGDSAVL*