prot_Ecto-sp6_S_contig9.18067.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18067.1
Unique Nameprot_Ecto-sp6_S_contig9.18067.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length405
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18067.1 vs. uniprot
Match: A0A6H5KS56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS56_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 2.460e-50
Identity = 392/403 (97.27%), Postives = 397/403 (98.51%), Query Frame = 0 
Query:    1 MMVMPKPAQQQEEQEAKERKALAALWWCTNGPAWVQAHGWEEASAAXXXXXXXXXXPQQCLLGEWDGVGVDPELQGVTLIDLRRNNLQGALPPEIGDLSHLRHLYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSESPPIVGGKGLRQWQVSQRKAFLNSWSMVDRLSHLETENAQLRKENDLLRK 403
            MMVMPKPAQQ+EEQEAKERKALAALWWCT+GPAWVQA GWEEASA XXXXXXXXXX +  LLGEWDGVGVDPELQGVTLIDLRRNNLQGALPPEIGDL+HLRHLYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSESPP+VGGKGLRQWQVSQRKAFLNSWSMVDRLSHLE ENAQLRKENDLLRK
Sbjct:    1 MMVMPKPAQQKEEQEAKERKALAALWWCTHGPAWVQALGWEEASAXXXXXXXXXXXXR--LLGEWDGVGVDPELQGVTLIDLRRNNLQGALPPEIGDLTHLRHLYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSESPPVVGGKGLRQWQVSQRKAFLNSWSMVDRLSHLEAENAQLRKENDLLRK 401
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BLAST of mRNA_Ecto-sp6_S_contig9.18067.1 vs. uniprot
Match: D8LM19_ECTSI (Hypothetical leucine-rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM19_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 6.850e-44
Identity = 378/388 (97.42%), Postives = 380/388 (97.94%), Query Frame = 0 
Query:   18 ERKALAALWWCTNGPAWVQAHGWEEASAAXXXXXXXXXXPQQ-CLLGEWDGVGVDPELQGVTLIDLRRNNLQGALPPEIGDLSHLRHLYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSESPPIVGGKGLRQWQVSQRKAFLNSWSMVDRLSHLETENAQLRKENDLLRKV 404
            +RKALAALWWCTNGPAWVQA GWEEASA XXXXXXXXXX    CLLGEWDGVGV PELQGVTLIDLRRNNLQGALPPEIGDL HLRHLYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSESPPIVGGKGLRQWQVSQRKAFLNSWSMVDRLSHLETENAQLRKENDLLRK+
Sbjct:    5 DRKALAALWWCTNGPAWVQALGWEEASAXXXXXXXXXXXXXXXCLLGEWDGVGVGPELQGVTLIDLRRNNLQGALPPEIGDLRHLRHLYLGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSESPPIVGGKGLRQWQVSQRKAFLNSWSMVDRLSHLETENAQLRKENDLLRKL 392
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BLAST of mRNA_Ecto-sp6_S_contig9.18067.1 vs. uniprot
Match: A0A6H5JVI4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI4_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 2.190e-5
Identity = 30/90 (33.33%), Postives = 47/90 (52.22%), Query Frame = 0 
Query:   18 ERKALAALWWCTNGPAWVQAHGWEEASAAXXXXXXXXXXPQQCLLGEWDGVGVDPELQGVTLIDLRRNNLQGALPPEIGDLSHLRHLYLG 107
            +R+AL  L+  T GP W    GW+  S+                +  W G+ ++     V+ + L +NNLQG LPPEIG+L+ + ++YLG
Sbjct:   29 DREALLTLYNETGGPEWTDTDGWDTNSSD---------------MNSWYGLSINETGSYVSRVSLEKNNLQGDLPPEIGNLTAVENIYLG 103
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BLAST of mRNA_Ecto-sp6_S_contig9.18067.1 vs. uniprot
Match: A0A6B1AF54_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B1AF54_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 8.690e-5
Identity = 35/89 (39.33%), Postives = 44/89 (49.44%), Query Frame = 0 
Query:   18 ERKALAALWWCTNGPAWVQAHGWEEASAAXXXXXXXXXXPQQCLLGEWDGVGVDPELQGVTLIDLRRNNLQGALPPEIGDLSHLRHLYL 106
            +R AL A +  T GP W     W   +                 LGEW G+ VD E+  V  ID+ RN L GA+PPEIG LS+L+ L L
Sbjct:  230 DRAALEAFYHATGGPDWANDDNWLTDAP----------------LGEWHGLRVD-EMGRVVFIDMYRNGLTGAVPPEIGALSNLKTLSL 301
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KS56_9PHAE2.460e-5097.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LM19_ECTSI6.850e-4497.42Hypothetical leucine-rich repeat protein n=1 Tax=E... [more]
A0A6H5JVI4_9PHAE2.190e-533.33Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6B1AF54_9BACT8.690e-539.33BIG2 domain-containing protein n=1 Tax=Gemmatimona... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 384..404
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 170..193
e-value: 170.0
score: 5.5
coord: 194..223
e-value: 88.0
score: 7.9
coord: 98..124
e-value: 9.3
score: 15.2
NoneNo IPR availablePANTHERPTHR27008:SF219coord: 159..293
coord: 74..246
NoneNo IPR availablePANTHERPTHR27008:SF219coord: 225..356
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 159..293
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 74..246
coord: 225..356
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 74..357
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 98..122
e-value: 5.0
score: 15.7
coord: 338..361
e-value: 100.0
score: 5.0
coord: 218..242
e-value: 38.0
score: 8.5
coord: 146..170
e-value: 13.0
score: 12.2
coord: 194..217
e-value: 76.0
score: 6.1
coord: 266..289
e-value: 160.0
score: 3.5
coord: 290..314
e-value: 30.0
score: 9.4
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 268..285
e-value: 0.7
score: 10.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 77..135
e-value: 7.3E-8
score: 32.1
coord: 148..207
e-value: 1.6E-7
score: 31.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 187..281
e-value: 3.5E-30
score: 106.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 39..186
e-value: 1.2E-39
score: 137.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 282..399
e-value: 1.5E-15
score: 58.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:708239..722289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18067.1mRNA_Ecto-sp6_S_contig9.18067.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 708239..722289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18067.1 ID=prot_Ecto-sp6_S_contig9.18067.1|Name=mRNA_Ecto-sp6_S_contig9.18067.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=405bp
MMVMPKPAQQQEEQEAKERKALAALWWCTNGPAWVQAHGWEEASAAGGDG
KQQQQQPQQCLLGEWDGVGVDPELQGVTLIDLRRNNLQGALPPEIGDLSH
LRHLYLGDNQLQGSIPKSISQLSQLCILSLRGNNLKGDIIPELGCLTALQ
TLSLRDNHFSGVIPPELGQLTALRHLFMNNNILRGPIPEELSQLEQLEQL
FLSDNELDGKIPESFGQLINLEELVLSGNQFTGNIPVQLSDLLGLVRLEL
DGNCLSGDVPPDLSALSNLKVLHLNNNSLTGPIPCELGMLSWLERLDLSK
NQLSGCIPPELGQLFCLELLILNDNKLIGGIPCELGRLHHINLLLLDGNH
LSESPPIVGGKGLRQWQVSQRKAFLNSWSMVDRLSHLETENAQLRKENDL
LRKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf