prot_Ecto-sp6_S_contig9.18058.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18058.1
Unique Nameprot_Ecto-sp6_S_contig9.18058.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1128
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.18058.1 vs. uniprot
Match: D8LM26_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM26_ECTSI)

HSP 1 Score: 1710 bits (4428), Expect = 0.000e+0
Identity = 1054/1131 (93.19%), Postives = 1061/1131 (93.81%), Query Frame = 0 
Query:    1 MGSIPYCDHHGWNWEPGQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLFVRPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVSGHHLPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVPSASSANSGWQTFWAGGGDTFDVAATAVSGDDRNTKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLNESLLGTIGLDDQDREFSSPSKSEAGWNNXXXXXXXXXARAGGCFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGATWLQRQDSPFRRKLWGDGGSASATTVTRASAQSALGVGSTSSSPPSYSGAASIGVRAPPRVAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSMVESRFNDHLDPSLALDPNDGARVGEPLGVQFELVVRASGRGEMDWWGRGDSAEPGSPGAGHIGIHAPRGPAPATPG--AGDWRVWRSAADTLALYDALALRFGQEFCGRVSRPKFKTTLPCFAAGASGVLSDDRSGSPPRPSSPDSPPALIVAPAAPHRVDILRDAKTVGAFLRSLLGLRQFLSTAVMDYLAQPAPASLPADDLSANGGGGAEAGSDHGSDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFSSGKADGGSGPSAAGQAVAGAALASDYGTWLKRLAVRLRRATPAGERFVRLRCISPAVTGEQVVRWLMREKVCNGDRASAVRLGQDMVSHRLLAPVCAGYHRPEEEVTGGGGDISSSGKEQGELLRSFDDAVGWLFAFVGDALRDPFAPPPPTQVAVMSNTGVDVRVTSWTETSDDDGAHVSFVVHTRVEATQEAWESPRRYREFTQLRKRLLRLGIDIPAAXXXXXXXXXXXXXXXXXXXXVAPGLPRKTWRANKFDKEHLETRRAALEVYLQAAVKEALSAPHLSGHLMMRFLDPDESNLRILSEQRRQQQRSRNPFARAHNSPPCSPRGGTPGGRRGVGGGAAAA--TADVGNESVGESLTAERTEAEDFDFLTDSLGGFG 1127
            MGSIPYCDHHGWNWE GQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLFVRPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVSGHHLPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVPSASSAN+GWQTFWAGGGDTFDVAATAVSGDDRNTK XXXXXXXXXXXXXXXXXXXX                      TLNESLLG IGLDDQDREFSSPSK EAGWNNXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGA+WLQRQDSPFRRKLWGDGG ASATTVTRASAQSAL        PPSYSGAASIGVRAPPRVAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSMVESRFNDHLDPSLALDPNDGARVGEPLGVQFELVVRASGRGEMDWWGRGDSAEP SPGAGHIGIH P GPAPATPG  AGDWRVWRSAADTLALYDALALRFGQEFCGRVSRPK KTTLP  AAGASGVLSDDRSGSPPRPSSPDSPPALIVA AAPHRVD+LRDAKTVGAFLRSLLGLRQFLSTAVMDYLAQPAPASLPADDLSANGGGGAEAGSDHGSDGY XXXXXXXXXXXXXXXXXXXXXXXXXXXRPFSSGKADGGSGPSAAGQAVAGAALASDYGTWLKRLAVRLRRATPAGE+FVRLRCISPAVTGEQVVRWLMREKVCNGDRASAVRLGQDMVSHRLLAPVCAGYHRPEEEVTGGGGD SSSGKE GELLRSFDDAVGWLFAFVGDALRDPFAPPPPTQVAVMSNTGVDVRVTSWTETSDDDGAHVSFVVHTRVEATQEAWESPRRYREFTQLRKRLLRLGIDIPAAXXXXXXXXXXXXXXXXXX  +APGLPRKTWRANKFDKEHLE RRAALE YL+AAVKEALSAPHLSGHLMMRFLDPDESNLR+LSEQRRQQQRSRNPFARAHNSPPCSPRGGTPGGRRGV         TADVGNESVGESLT ERTEAEDFDFLTDSLGGFG
Sbjct:    1 MGSIPYCDHHGWNWESGQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLFVRPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVSGHHLPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVPSASSANNGWQTFWAGGGDTFDVAATAVSGDDRNTKXXXXXXXXXXXXXXXXXXXXXFEGGGAWPIAGGTNGRGG----TLNESLLGIIGLDDQDREFSSPSKPEAGWNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGASWLQRQDSPFRRKLWGDGGFASATTVTRASAQSALSAXXXXXXPPSYSGAASIGVRAPPRVAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSMVESRFNDHLDPSLALDPNDGARVGEPLGVQFELVVRASGRGEMDWWGRGDSAEPSSPGAGHIGIHPPHGPAPATPGTGAGDWRVWRSAADTLALYDALALRFGQEFCGRVSRPKLKTTLPSSAAGASGVLSDDRSGSPPRPSSPDSPPALIVASAAPHRVDMLRDAKTVGAFLRSLLGLRQFLSTAVMDYLAQPAPASLPADDLSANGGGGAEAGSDHGSDGYFXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFSSGKADGGSGPSAAGQAVAGAALASDYGTWLKRLAVRLRRATPAGEQFVRLRCISPAVTGEQVVRWLMREKVCNGDRASAVRLGQDMVSHRLLAPVCAGYHRPEEEVTGGGGD-SSSGKEPGELLRSFDDAVGWLFAFVGDALRDPFAPPPPTQVAVMSNTGVDVRVTSWTETSDDDGAHVSFVVHTRVEATQEAWESPRRYREFTQLRKRLLRLGIDIPAAXXXXXXXXXXXXXXXXXX--LAPGLPRKTWRANKFDKEHLEKRRAALEAYLRAAVKEALSAPHLSGHLMMRFLDPDESNLRVLSEQRRQQQRSRNPFARAHNSPPCSPRGGTPGGRRGVXXXXXXXXXTADVGNESVGESLTEERTEAEDFDFLTDSLGGFG 1124
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18058.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM26_ECTSI0.000e+093.19PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 772..884
e-value: 2.6E-6
score: 29.2
IPR001683Phox homologous domainPFAMPF00787PXcoord: 919..1042
e-value: 3.1E-10
score: 40.0
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 906..1047
score: 13.444
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 903..1066
e-value: 3.3E-16
score: 61.2
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 905..1044
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..125
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 179..1127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availableTMHMMTMhelixcoord: 125..143
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 156..178
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 790..845

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:644855..650567 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18058.1mRNA_Ecto-sp6_S_contig9.18058.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 644855..650567 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18058.1 ID=prot_Ecto-sp6_S_contig9.18058.1|Name=mRNA_Ecto-sp6_S_contig9.18058.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1128bp
MGSIPYCDHHGWNWEPGQGPSPCMGETASFLLASSVLLYTIPLTKDTLHP
FQRAAAAGSTAARVHAVQITLAIVQASIALVCGVLFVRPRGMLSGANLLY
SMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVS
GHHLPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVP
SASSANSGWQTFWAGGGDTFDVAATAVSGDDRNTKSGSSSSSSSRWCCFG
GRRRGGDDDFEGGGAWPTAGGTNGGGGGTLNESLLGTIGLDDQDREFSSP
SKSEAGWNNGGGGSSQGRARAGGCFRRVGGFFSSVVDRGNKAASAAAEQE
EGRAGGGAGATWLQRQDSPFRRKLWGDGGSASATTVTRASAQSALGVGST
SSSPPSYSGAASIGVRAPPRVAAPIFGVAVTRWRLVDLDGEPLAHGSSSG
DVAWTDRSRSASSSSARTATTLSASEATLTGVGGGGGGRASSMVESRFND
HLDPSLALDPNDGARVGEPLGVQFELVVRASGRGEMDWWGRGDSAEPGSP
GAGHIGIHAPRGPAPATPGAGDWRVWRSAADTLALYDALALRFGQEFCGR
VSRPKFKTTLPCFAAGASGVLSDDRSGSPPRPSSPDSPPALIVAPAAPHR
VDILRDAKTVGAFLRSLLGLRQFLSTAVMDYLAQPAPASLPADDLSANGG
GGAEAGSDHGSDGYFTSDDLLLNDDDERGSRHTTASTSSHHRRPFSSGKA
DGGSGPSAAGQAVAGAALASDYGTWLKRLAVRLRRATPAGERFVRLRCIS
PAVTGEQVVRWLMREKVCNGDRASAVRLGQDMVSHRLLAPVCAGYHRPEE
EVTGGGGDISSSGKEQGELLRSFDDAVGWLFAFVGDALRDPFAPPPPTQV
AVMSNTGVDVRVTSWTETSDDDGAHVSFVVHTRVEATQEAWESPRRYREF
TQLRKRLLRLGIDIPAAAAAAVARNGDDGGGGGGGGGVAPGLPRKTWRAN
KFDKEHLETRRAALEVYLQAAVKEALSAPHLSGHLMMRFLDPDESNLRIL
SEQRRQQQRSRNPFARAHNSPPCSPRGGTPGGRRGVGGGAAAATADVGNE
SVGESLTAERTEAEDFDFLTDSLGGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR001683Phox
IPR036871PX_dom_sf
IPR036390WH_DNA-bd_sf