prot_Ecto-sp6_S_contig9.18050.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.18050.1
Unique Nameprot_Ecto-sp6_S_contig9.18050.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length346
Homology
BLAST of mRNA_Ecto-sp6_S_contig9.18050.1 vs. uniprot
Match: D8LM33_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM33_ECTSI)

HSP 1 Score: 647 bits (1668), Expect = 8.830e-234
Identity = 340/345 (98.55%), Postives = 343/345 (99.42%), Query Frame = 0
Query:    1 MLAGRNGTDVDEFDNQLNDPGQYDNPQDPASLSVVEHLRALSIRGKLTLLYVAGVIVFVLWALDWVIAFACMASFLVSAAPLFAWWSRIRFSCPLDLVVRSFGLGIFAMVWVVYLLFRLCSTGLMGRLLYMMFGRLVGVVVLIILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYGVLPGGDVDEVEIPSNIDVNTLV 345
            MLAGRNG DVDEFDNQLNDPGQYDNPQDPASLSVVEHLRALSIRGKLTLLYVAGVIVFVLWALDWVIAFACMASFLVSAAPLF WWSRIRFSCPLDLVVRSFGLGIFAMVWVVY+LFRLCSTGLMGRLLYMMFGRLVGVVVL+ILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYGVLPGGDVDEVEIPSN+DVNTLV
Sbjct:    1 MLAGRNGADVDEFDNQLNDPGQYDNPQDPASLSVVEHLRALSIRGKLTLLYVAGVIVFVLWALDWVIAFACMASFLVSAAPLFVWWSRIRFSCPLDLVVRSFGLGIFAMVWVVYMLFRLCSTGLMGRLLYMMFGRLVGVVVLVILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYGVLPGGDVDEVEIPSNVDVNTLV 345          
BLAST of mRNA_Ecto-sp6_S_contig9.18050.1 vs. uniprot
Match: A0A836CLE4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLE4_9STRA)

HSP 1 Score: 179 bits (455), Expect = 7.320e-50
Identity = 132/337 (39.17%), Postives = 179/337 (53.12%), Query Frame = 0
Query:   35 VEHLRALSIRGKLTLLYVAGVIVFVLWALDWVIAFACMASFLVSAAPLFAWWSRIRFSCPLDLVVRSFGLGIFAMVWVVYLLFRLCSTGLMGRLLYMMFGRLVGVVVLIILVGLEEMVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVL---------DLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGYG-----------------------VLPGGDVDEVEIPSNI 339
            +E L+ALS+  KLT++YV       L + D V+   CM +      PL  WW +   +CPLD+V+RSFG+G   M   V L   L    L+   + + F  ++ + + I +VG+EE+ +V+ AR  K  + + RET  HQIA TATSVGY+   +    +VL         + ++D  L      + D  VA  A LI   F  P+ VL+GY+ GL  TR+  F +V L  F +RS  MV   LW  L  +W  ++A ++ TN+ I   MV RIK+VEA LP EY QRVGYLQAFGYG                       VLPGGD DEVEIP NI
Sbjct:   25 LEQLKALSLTAKLTIVYVLVCAHLTLLSRDLVLYLGCMVAHAALIIPLLKWWQKHSHACPLDMVIRSFGMGYCGMALGVVLTLLLGFMVLILATVALPFMIVLWLGLPIYVVGIEELFRVLIARRLKSGLDMSRETITHQIAYTATSVGYAAASAALNFVVLASLEGYLAGEHDIDPDLSPDGAPALDFKVAAAAGLIRMAFSVPVQVLAGYMTGLNTTRRLPFKRVGLEAFALRSALMVLSILWELLLPSWLGLIA-VIGTNIGIVWLMVRRIKRVEAQLPQEYFQRVGYLQAFGYGXXXXXXXXXXXXXXXXXXXXXXXVLPGGDPDEVEIPDNI 360          
BLAST of mRNA_Ecto-sp6_S_contig9.18050.1 vs. uniprot
Match: A0A0H5QPC6_9EUKA (Uncharacterized protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QPC6_9EUKA)

HSP 1 Score: 61.6 bits (148), Expect = 5.290e-7
Identity = 54/194 (27.84%), Postives = 96/194 (49.48%), Query Frame = 0
Query:  140 VVLIILVGLEEMVKVVFAR----WSKRDVAIGRETKAHQIAATA-TSVGYSVGFSFFMIIVLDLEVDLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQT------HFMKVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIKKVEATLPVEYLQRVGYLQAFGY 322
            +VL++ V  EE+ K V  +     ++ D A  RET+  ++  +   +  +S+G+S +      L    LL      S  + + LL  ++  +   P HV+SGYL+GL+++R+T      H + +     L R+ F+  +F W    G  +    G ++T+VLI     + I+ ++  LP+EYL+  GY    GY
Sbjct:  141 IVLLLQVSAEEIFKYVMMKKKVEMTESDDAHVRETQLCRLRNSLFMATSFSLGYSTYQ----GLATSALLS---QESVTIWIPLLISVLVALLYIPSHVMSGYLIGLQLSRRTVLNENIHAIVILTTPILFRTCFLFQLFFWA---GKQEHRFLGWVVTSVLISVVFAYYIRHIKKKLPIEYLESAGYSTLLGY 324          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.18050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM33_ECTSI8.830e-23498.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLE4_9STRA7.320e-5039.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0H5QPC6_9EUKA5.290e-727.84Uncharacterized protein n=2 Tax=Spongospora subter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 279..296
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 274..278
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..240
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..66
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 118..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 241..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..61
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 279..296
NoneNo IPR availableTMHMMTMhelixcoord: 129..148
NoneNo IPR availableTMHMMTMhelixcoord: 40..62
NoneNo IPR availableTMHMMTMhelixcoord: 66..85
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 97..119
NoneNo IPR availableTMHMMTMhelixcoord: 252..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:605073..609476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.18050.1mRNA_Ecto-sp6_S_contig9.18050.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 605051..609891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.18050.1 ID=prot_Ecto-sp6_S_contig9.18050.1|Name=mRNA_Ecto-sp6_S_contig9.18050.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=346bp
MLAGRNGTDVDEFDNQLNDPGQYDNPQDPASLSVVEHLRALSIRGKLTLL
YVAGVIVFVLWALDWVIAFACMASFLVSAAPLFAWWSRIRFSCPLDLVVR
SFGLGIFAMVWVVYLLFRLCSTGLMGRLLYMMFGRLVGVVVLIILVGLEE
MVKVVFARWSKRDVAIGRETKAHQIAATATSVGYSVGFSFFMIIVLDLEV
DLLLGIQADSSADMIVALLALLITTMFGTPMHVLSGYLVGLEVTRQTHFM
KVALYTFLIRSLFMVNIFLWVFLFGTWQPIMAGLLLTNVLICCAMVHRIK
KVEATLPVEYLQRVGYLQAFGYGVLPGGDVDEVEIPSNIDVNTLV*
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