prot_Ecto-sp6_S_contig9.17988.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig9.17988.1
Unique Nameprot_Ecto-sp6_S_contig9.17988.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length456
Homology
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BLAST of mRNA_Ecto-sp6_S_contig9.17988.1 vs. uniprot
Match: D7G761_ECTSI (Imm downregulated 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G761_ECTSI)

HSP 1 Score: 766 bits (1977), Expect = 3.540e-278
Identity = 389/390 (99.74%), Postives = 390/390 (100.00%), Query Frame = 0 
Query:    1 MAPGRISAAALLVLAQHLHVDAFSVNGFAGASVRPQQTRTASSAAPSMVAAAPPSGKPMTKEMQRKMERLEQERIRKYVNPPEAYADQPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTDVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIEAAAAKKAAKAAEKEK 390
            MAPGRISAAALLVLAQHLHVDAFSVNGFAGASVRPQQTRTASSAAPSMVAAAPPSGKPMTKEMQRKMERLEQERIRKYVNPPEAYADQPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQT+VPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIEAAAAKKAAKAAEKEK
Sbjct:    1 MAPGRISAAALLVLAQHLHVDAFSVNGFAGASVRPQQTRTASSAAPSMVAAAPPSGKPMTKEMQRKMERLEQERIRKYVNPPEAYADQPLSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTEVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIEAAAAKKAAKAAEKEK 390
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BLAST of mRNA_Ecto-sp6_S_contig9.17988.1 vs. uniprot
Match: A0A0G4HAE1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HAE1_9ALVE)

HSP 1 Score: 323 bits (828), Expect = 4.310e-103
Identity = 162/283 (57.24%), Postives = 213/283 (75.27%), Query Frame = 0 
Query:   90 LSTPTSEHLIGEEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGPYLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTDVPLDE--TDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLM----IKPDHSVAK-GSNF 365
            +S P SE LIGEE+V DD +AS L+D+C+ E +RL  S++GW    E +G  VETK   G Y  SGV +VRG+G I+A  DDF+ +QVSREGFQ IDEYL NHR V++++W+T+P+ E+ KDYELM NRVEW YP ++REFVALD + RP ++LISKSALHP+RPGGSRYQ  + +D   + +VRAVQYY SKVEP+   KCLL MVTWGEMCD+Y+A+W+N+FN ++FITPK++RFR  M  G+ V+E SNIVN AW + KL      +KPD ++ K G++F
Sbjct:  143 VSLPESEDLIGEELVTDDMSASLLSDRCMSELDRLIKSEDGWQSE-ELEGCVVETKKTHGAYGLSGVDIVRGVGEIDASADDFFEYQVSREGFQCIDEYLVNHRKVDQYKWLTRPELESGKDYELMMNRVEWRYPFKSREFVALDTVHRPERVLISKSALHPERPGGSRYQDALEVDPPGSPFVRAVQYYGSKVEPVGPNKCLLYMVTWGEMCDNYSAWWVNQFNKYLFITPKFRRFREAMS-GKTVWEESNIVNNAWDILKLKHNMGGLKPDRTILKNGADF 423
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig9.17988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G761_ECTSI3.540e-27899.74Imm downregulated 15 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A0G4HAE1_9ALVE4.310e-10357.24Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 369..389
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..455
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.665
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 110..316
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 91..323
e-value: 6.4E-8
score: 34.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig9contigEcto-sp6_S_contig9:21159..26056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig9.17988.1mRNA_Ecto-sp6_S_contig9.17988.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig9 21096..26810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig9.17988.1 ID=prot_Ecto-sp6_S_contig9.17988.1|Name=mRNA_Ecto-sp6_S_contig9.17988.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=456bp
MAPGRISAAALLVLAQHLHVDAFSVNGFAGASVRPQQTRTASSAAPSMVA
AAPPSGKPMTKEMQRKMERLEQERIRKYVNPPEAYADQPLSTPTSEHLIG
EEMVKDDATASALADKCILEAERLFASDEGWTKVLEDDGIFVETKDVAGP
YLKSGVRVVRGLGAINADCDDFYNFQVSREGFQSIDEYLENHRNVERHEW
VTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALH
PDRPGGSRYQTDVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMC
DSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKL
LMIKPDHSVAKGSNFVDNLRNQGIEAAAAKKAAKAAEKEKDGCCCADCLP
ASHTVSSPACWEGLRTGRCQSVPRTWAFWLTQHRCILPWARCTHLLRWFF
WQGEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf