prot_Ecto-sp6_S_contig89.17967.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17967.1
Unique Nameprot_Ecto-sp6_S_contig89.17967.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length315
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: D8LK87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK87_ECTSI)

HSP 1 Score: 460 bits (1184), Expect = 2.390e-160
Identity = 292/333 (87.69%), Postives = 293/333 (87.99%), Query Frame = 0
Query:    8 PVMEGVASVVAPPVAAVAAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DACT-------------------------VFVGNLAWGTTDDDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDRK 314
            P   GVASVVAP        VSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + C                           FVGNLAWGTTDDDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDRK
Sbjct:   31 PTTAGVASVVAPXXXXXXX-VSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPCPGFGGKPRGGEKEEKLFXXXXXXXXXXFVGNLAWGTTDDDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDRK 362          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A6H5JEX9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX9_9PHAE)

HSP 1 Score: 380 bits (975), Expect = 8.890e-131
Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0
Query:    1 MSAFAEAPVMEGVASVVAPPVAAVAAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGG 195
            MSAFAEAP MEGVASVVAPPVAA AAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGG
Sbjct:    1 MSAFAEAPGMEGVASVVAPPVAAGAAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGG 195          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A835ZG94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG94_9STRA)

HSP 1 Score: 319 bits (818), Expect = 9.550e-106
Identity = 177/289 (61.25%), Postives = 210/289 (72.66%), Query Frame = 0
Query:   31 TVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----DACTVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDRK 314
            TVFVGNL+W TT+++LR FM S+G V+S+ VQ HADSGRSKGWGLV Y+    A AAIEQLNNA+LGGR +H+RLDR  ++ SGGF VFVGNLPWSTT EDLQ +FA ++PYD HVKTNMAGRSRGF ILRF+ PE GQ+AI+ M  + ID RPIQVREDR++GG                       XXXXXXXXXXXXXX       D CTVFVGNLAWGTT++DL+A F +   +++A VQ  PSGRSKGWGLV ++ P +   AV  L  + LHERRLTVRLDRK
Sbjct:    8 TVFVGNLAWNTTADELRDFMASVGTVLSSAVQCHADSGRSKGWGLVEYSTDGEAMAAIEQLNNAELGGRAVHVRLDRSNIDTSGGFAVFVGNLPWSTTTEDLQTLFAQFQPYDVHVKTNMAGRSRGFAILRFSAPEPGQQAIAAMNGFDIDGRPIQVREDRDVGGGAEMGRGTRRAAGRGAAEPRADAXXXXXXXXXXXXXXPHKQEAVDRCTVFVGNLAWGTTNEDLVAHFVSMSGMLTAEVQYTPSGRSKGWGLVTFAEPEQALAAVELLAESTLHERRLTVRLDRK 296          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A835YWJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ3_9STRA)

HSP 1 Score: 297 bits (761), Expect = 4.290e-97
Identity = 170/290 (58.62%), Postives = 194/290 (66.90%), Query Frame = 0
Query:   31 TVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDRE------IGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDRK 314
            TVFVGNLSW TTSE+LR FM S GE+VS+EVQ HADSGRSKGWGLV Y+ P  A AAIE LNNADLGGR +H+R DR  +E SGGF VFVGNLPWS TD DL  +FA + P+D HVKTNM GRSRGFGILRF +PE G+ AI  M  ++I+ R IQVREDRE         XXXXXXXXXXXXX                            CTVFVGNLAW TT +DL   F T   +VSA VQ   +GRSKGWGL  +S+P +   A   +  T LH+RRLTVRLD+K
Sbjct:    8 TVFVGNLSWNTTSEELRDFMASQGEIVSSEVQCHADSGRSKGWGLVQYSTPEEATAAIELLNNADLGGRSVHLRFDRTTIETSGGFAVFVGNLPWSVTDLDLTALFAKFNPFDAHVKTNMTGRSRGFGILRFHSPEEGREAIEAMNGFEIEGRHIQVREDREGEVRGXXXXXXXXXXXXXXXXXGAPAEGAATEAAHTSPAPAAAARKEPSGCTVFVGNLAWTTTTEDLTEHFSTMNGMVSAEVQATAAGRSKGWGLATFSTPEQATAACELMAETSLHDRRLTVRLDKK 297          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A7S2V6P6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P6_9STRA)

HSP 1 Score: 251 bits (640), Expect = 8.200e-79
Identity = 154/288 (53.47%), Postives = 193/288 (67.01%), Query Frame = 0
Query:   31 TVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIG-----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDR 313
            TVFVGNL W TT+E+L+ FM   G VVSA+VQ+HADSGRSKGWGLV Y+    A+ AI+ LN+  L  R IH+RLDR  ++ + G  VFVGNLPWSTT E L ++F  YEP+D HVKTNMAGRSRGF ILRF   +    AI++M  Y ++ R IQVREDR +      G  XXXXXXXXXXXX       XXXXXXX            + T+FVGNLAW TTD +L+  F T  + +SA+VQ++ SGRSKGWGLV Y +    + A+   NN+ L++R + VR+DR
Sbjct:    7 TVFVGNLKWSTTNEELQEFMSQCGNVVSADVQAHADSGRSKGWGLVEYSTAEEAQNAIQLLNSTTLQERQIHVRLDRSNLDETAGVSVFVGNLPWSTTSETLAELFGSYEPFDVHVKTNMAGRSRGFAILRFNNQDQANAAITDMNGYNLEERNIQVREDRGVAEGGPRGGSXXXXXXXXXXXXRGGAEDSXXXXXXXQGGARTPRNVEPSNTLFVGNLAWSTTDTELMEHF-TDTSPISANVQVSASGRSKGWGLVSYETVEAAQAAIEFKNNSTLNDRVIHVRMDR 293          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A7S2GAK8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAK8_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.560e-72
Identity = 131/293 (44.71%), Postives = 171/293 (58.36%), Query Frame = 0
Query:   23 AVAAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTVFVGNLAWGTTDDDLLATFQTAGAV-VSAHVQI-APSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDR 313
            A+  P ++T+FVGNL+W TTSEDL+ +  ++G V+S EVQSHAD+GRSKGW LVTY+    A  AI QL+  D   RP+++R+DR  VE  GG  VFVGNLPWSTT+E L ++F  + P+D +VKT M GRSRGF I+RF TPE  + AI  MQ +  + R + VR DR +                                            T+FV NL W +TDDDL   F  AG+   SA VQ    +GRSKGWGLV Y +P E  +A+ +LNNT L  R++ VR D+
Sbjct:   16 AIQVPSTATLFVGNLAWSTTSEDLKKYCAAVGNVLSVEVQSHADTGRSKGWALVTYSTSEEAAVAITQLHGHDFNDRPLNVRVDRSNVEQMGGTLVFVGNLPWSTTNEQLLELFGQFNPFDVNVKTTMNGRSRGFAIVRFDTPERAEVAIGTMQGFIFEGRTLDVRIDRPLTDRRPKRAANEEGGAEDAQEPTN---------------------TLFVTNLDWKSTDDDLFQHFSQAGSTPTSAAVQKNEANGRSKGWGLVMYETPEEATSAMVQLNNTDLDSRKIRVRFDK 287          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A7S2DGC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGC6_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.240e-72
Identity = 152/285 (53.33%), Postives = 193/285 (67.72%), Query Frame = 0
Query:   31 TVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTVFVGNLAWGTTDDDLLATFQTAGAV-VSAHVQIAPSG-RSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDR 313
            T+FVGNLSW TT+E+L  FM + G V S +VQ+HAD+GRSKGW LVTY         I+Q N  +  GR +++R DR ++E   GFPVFVGNLPWSTT EDL  +F  + P+D HVKT MAGRSRGF ILRF + E+ Q+A + M  ++++ R I+VREDR+ GG      XXXXXXXXXXXXXXXXXXXXXXXXX         + T+FV NL W +TDDDL   F  AG+  +SA VQ   S  RSKGWGLV Y++  E + A  +LN+T L  R++ +R D+
Sbjct:   35 TLFVGNLSWATTNEELSEFMANYGTVASCQVQAHADTGRSKGWALVTYTTAEECTYTIQQTNGQEFNGRNLNVRQDRSQMEELSGFPVFVGNLPWSTTSEDLSDLFRDFGPFDVHVKTTMAGRSRGFAILRFESLEVAQQATAAMNGHELEGRSIEVREDRQTGGQVPNNSXXXXXXXXXXXXXXXXXXXXXXXXXLPP------SMTLFVTNLDWKSTDDDLFQHFSQAGSTPISATVQKNESTHRSKGWGLVTYNTTDEADAARIQLNSTDLDSRKIRIRFDK 313          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A6U4FSY9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FSY9_9STRA)

HSP 1 Score: 214 bits (545), Expect = 4.600e-65
Identity = 111/286 (38.81%), Postives = 159/286 (55.59%), Query Frame = 0
Query:   29 SSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDRK 314
            ++ +++GNL+W TT E+L  F+GS+GEV++A VQ HADS RSKGWGL TYA P  A  A+ QL+ ++L GRP+H+R DR ++E  GG  +FVGN+PW  T E L + F P++P D HVKTNMAGRSRGF I +F   EL   A+++M   ++  R +QVRED+                                            A  V+VG L+    ++ L+  F   G V+   +    SG+SKGW ++  SS  E + A+  LN   +  +++ VR DRK
Sbjct:    3 NTDIYIGNLTWDTTDEELLEFLGSVGEVLNASVQRHADSQRSKGWGLATYAAPEGAALAVSQLDQSELKGRPVHVRFDRSKIENVGGVNIFVGNIPWEITSEQLYESFFPFQPIDVHVKTNMAGRSRGFAIAKFPNQELADAAVAQMNGKELQGRQLQVREDKA------------------------------------PHERAVVAPRVYVGKLSAAVAEEGLINLFSEVGTVIEVRMARYSSGQSKGWAIITLSSLEEAQLAIEVLNGREIDGQQIVVRGDRK 252          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: K8YWK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWK2_NANGC)

HSP 1 Score: 182 bits (462), Expect = 5.970e-53
Identity = 86/163 (52.76%), Postives = 111/163 (68.10%), Query Frame = 0
Query:   29 SSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDR 191
            S TVFVGNLSWGTT++ L   M + G V+  EVQ+H+D+GRSKGW LVT+     A  A+E L   ++ GRP+++R DR E+E   GF VFVGNLPW  T   L+ +F+ + PYD H+KTNM+GRSRGFG+LRF + E  QRAI +M    +  R I VR DR
Sbjct:    2 SKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164          
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Match: A0A4D9CR95_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR95_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.330e-50
Identity = 107/268 (39.93%), Postives = 141/268 (52.61%), Query Frame = 0
Query:   50 MGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDR---EIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDACTVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQI-APSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDR 313
            M + G V+  EVQ+H+D+GRSKGW LVT+     A  A+E L   ++ GRP+++R DR E+E   GF VFVGNLPW  T   L+ +F+ + PYD H+KTNM+GRSRGFG+LRF + E  QRAI +M    +  R I VR DR   EI G                                          TV  GN+ W T D+ L      AG VVS  +Q  A + RSKGW +++Y +  E   AV  L+ T+L +R L VR  R
Sbjct:    1 METAGRVLDVEVQAHSDTGRSKGWALVTFEAAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFRPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEIMGHSPATMEASD--------------------------------TVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYR 236          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK87_ECTSI2.390e-16087.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEX9_9PHAE8.890e-13198.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZG94_9STRA9.550e-10661.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWJ3_9STRA4.290e-9758.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V6P6_9STRA8.200e-7953.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GAK8_9STRA1.560e-7244.71Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7S2DGC6_9STRA2.240e-7253.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6U4FSY9_9STRA4.600e-6538.81Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K8YWK2_NANGC5.970e-5352.76Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9CR95_9STRA1.330e-5039.93Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 238..310
e-value: 1.7E-17
score: 74.1
coord: 31..104
e-value: 7.7E-23
score: 91.9
coord: 117..188
e-value: 2.9E-20
score: 83.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 118..185
e-value: 5.8E-16
score: 58.1
coord: 239..307
e-value: 5.3E-14
score: 51.8
coord: 32..102
e-value: 3.2E-17
score: 62.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 237..314
score: 15.323
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 30..108
score: 16.892
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 116..192
score: 14.573
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 18..112
e-value: 8.3E-24
score: 86.3
coord: 231..314
e-value: 1.6E-19
score: 72.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 113..210
e-value: 5.1E-20
score: 73.8
NoneNo IPR availablePANTHERPTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINcoord: 115..313
coord: 28..108
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 115..224
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 198..311
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 25..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:545638..554250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17967.1mRNA_Ecto-sp6_S_contig89.17967.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 545567..554250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17967.1 ID=prot_Ecto-sp6_S_contig89.17967.1|Name=mRNA_Ecto-sp6_S_contig89.17967.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=315bp
MSAFAEAPVMEGVASVVAPPVAAVAAPVSSTVFVGNLSWGTTSEDLRTFM
GSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRP
IHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNM
AGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGGGGEGG
GGGGGGGRRGRGSSGGGGGGGGGGGGGGDGGGGGDACTVFVGNLAWGTTD
DDLLATFQTAGAVVSAHVQIAPSGRSKGWGLVKYSSPTETETAVTELNNT
MLHERRLTVRLDRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf