prot_Ecto-sp6_S_contig89.17942.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17942.1
Unique Nameprot_Ecto-sp6_S_contig89.17942.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length923
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17942.1 vs. uniprot
Match: D8LKE3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE3_ECTSI)

HSP 1 Score: 1277 bits (3304), Expect = 0.000e+0
Identity = 819/922 (88.83%), Postives = 828/922 (89.80%), Query Frame = 0
Query:    1 MGRVREAQHQKGSVASGELLPYYAPMAQMQIPAGTRNRHQEHDVPTTTYYAQLAWPPKGMSPEDGAAKLDDRQYGRNHCPPRSMPSAMAMDDDPAPRSPARPGPEESLPTAANPSDVRLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMSLLDGKPPPVLSLSLSSTMPLPPXXXXXXXXKPGEHHRHNSRRMPHRTSRGAPSSCSPDRRGSGSIREGFTASSSLDFVGDLSVERRWRDSAVAGRSLYPQFTPDSHQRAVARGGVRGGARVRGGGDGDGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKEGSTSRVGVDDPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGHRAAAQAPHGETGAARREAWSQARREGAVGDGKMQGQRTSHRQRSIAPGVGGGGIARNRRALGVRSLEPTTRLARRRTPVAAASSRHPRQASGAGGGQAFDTDGSAGGVGXXXXSSSKLGRGGAVGPRISVRSNSGSNARAGRRVGGDSWAKPGATRKPASISNSRSRQIPSTASRGETVTVRGRGGTRSGGGGKTARSALSKDSRAEGSGGGKPNGNVRSPSSYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGKGSDRGGGEDAEDDEIRDVDTIAHDDHVLGYGDRGSGGEGTFVSPLSTAGILHRISSSRRSXXXXXXXXXXXXXXXXSSGTVQTGDRPQHQAGAPRNQWQHSEPGVRETGGRGASSAAATEAVFRGGTSKRKRPRLFSFRRRRRRWERGSANGRDVPRRSP 922
            MGRVREAQHQKGSVASGELLPYYAPM QM+IPAGTRNRHQ +DVPTTTY AQLAWPPKG SPEDGAAKLDDRQYGRNHCPPRSMPSA+AMDDDPAPRSPARPGPEESLPTAANPSDV LVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMSLLDGK PPVLSLSLSSTMPLP XXXXXXX KPG+HHRHNSRRMPHRTSRG PSSCSPDRRGSGSIREGF ASSSLDFVGDLSVERRWRDSAVAGRS   QFTPDSHQRAVARGGVRGG RVRGGGDG+GGRGREPCIKVTTGGGGPTVAPGSYAEIFVA MRKEGSTSRVG+DDPAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        Q      GAARREAWSQARREGAVGDGKMQ QRTSHRQR +APGVGGG IARNRRALGVRSLEPTTR ARRRTP      RHPRQASGAGG QAFDTDGSAGGVGXXXXSSSKLGRGGAV PRISVRSNSGSNAR GRRVGGDSWAKPGATRKPASISNSRSRQ PSTASRGETVTVRGRGGTRSGGGGKTARSALSKDSRAEGSGGGKPNGN RSPSSYRFRTTLGRRGSQQPPRP APVASPWTPREDARPWGW GGKGSDRGG ED   DEIR VD IAHDD VLGYGD GSGGEGTFVSPLSTAGILHRISSSRR XXXXXXXXXXXXXXXX SG VQTGDRPQHQAGAPRNQWQ SEPGVRE+G                                 R WERGS+NGRDVPRRSP
Sbjct:    1 MGRVREAQHQKGSVASGELLPYYAPMTQMKIPAGTRNRHQAYDVPTTTY-AQLAWPPKGTSPEDGAAKLDDRQYGRNHCPPRSMPSAVAMDDDPAPRSPARPGPEESLPTAANPSDVLLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMSLLDGKAPPVLSLSLSSTMPLPXXXXXXXXGKPGDHHRHNSRRMPHRTSRGTPSSCSPDRRGSGSIREGFMASSSLDFVGDLSVERRWRDSAVAGRS---QFTPDSHQRAVARGGVRGGVRVRGGGDGNGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAGMRKEGSTSRVGIDDPAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQR-----GAARREAWSQARREGAVGDGKMQEQRTSHRQRKVAPGVGGGDIARNRRALGVRSLEPTTRSARRRTPAXXXXXRHPRQASGAGGDQAFDTDGSAGGVGXXXXSSSKLGRGGAVNPRISVRSNSGSNARVGRRVGGDSWAKPGATRKPASISNSRSRQTPSTASRGETVTVRGRGGTRSGGGGKTARSALSKDSRAEGSGGGKPNGNARSPSSYRFRTTLGRRGSQQPPRPTAPVASPWTPREDARPWGWGGGKGSDRGGDEDXXXDEIRVVDAIAHDDRVLGYGDGGSGGEGTFVSPLSTAGILHRISSSRRXXXXXXXXXXXXXXXXXXSGAVQTGDRPQHQAGAPRNQWQDSEPGVRESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-WERGSSNGRDVPRRSP 912          
BLAST of mRNA_Ecto-sp6_S_contig89.17942.1 vs. uniprot
Match: A0A6H5JHT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT2_9PHAE)

HSP 1 Score: 1183 bits (3060), Expect = 0.000e+0
Identity = 724/953 (75.97%), Postives = 739/953 (77.54%), Query Frame = 0
Query:    2 GRVREAQHQKGSVASGELLPYYAPMAQMQIPAGTRNRHQEHDVPTTTYYAQLAWPPKGMSPEDGAAKLDDRQYGRNHCPPRSMPSAMAMDDDPAPRSPARPGPEESLPTAANPSDVRLVDLGSRSLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNR---------------------------LASLEGFAALPNLRELDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTKVDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMSLLDGKPPPVLSLSLSSTMPLPPXXXXXXXXKPGEHHRHNSRRMPHRTSRGAPSSCSPDRRGSGSIREGFTASSSLDFVGDLSVERRWRDSAVAGRSLYPQFTPDSHQRAVARGGVRGGARVRGGGDGDGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKEGSTSRVGVDDPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGHRAAAQAPHGET------------------------------------------------GAARREAWSQARREGAVGDGKMQGQRTSHRQRSIAPGVGGGGIARNRRALGVRSLEPTTRLARRRTPV--------AAASSRHPRQASGAGGGQAFDTDGSAGGVGXXXXSSSKLGRGGAVGPRISVRSNSGSNARAGRRVGGDSWAKPGATRKPASISNSRSRQIPSTASRGETVTVRGRGGTRSGGGGKTARSALSKDSRAEGSGGGKPNGNVRSPSSYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGKGSDRGGGEDAEDDEIRDVDTIAHDDHVLGYGDRGSGGEGTFVSPLSTAGILHRISSSRRSXXXXXXXXXXXXXXXXSSGTVQTGDRPQHQAGAPRNQWQHSEPGVRETG 871
            GRVREAQH+KGSVASGELL Y+APMAQMQIP GTRNRHQ HDVPTTTY AQLAWPPKG SPEDG  KLDDRQYGRNHCPPRSMPSA+AMDDDPAPRSPARPGPEESLPTAANPSDV LVDLGSR LLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNR                           LASLEGFAALPNLRELDVS                        XXXXXXXXXXXXXXXXXXXXXX LKTK DVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGM LLDGKPP VLSLSLSSTMPL  XXXXXXX KP +HHRHNSRRMPHRTSRG PSSCSPDRRGSGSIREGF A+SSLDFVGDLSVERRWRDSAVAG+SLYPQF PDSHQRA A GGVRGGAR R         GREPCIKVTTGGGGPTVAPGSYAEIFVAAMRK+GSTSR  VDDPAA                                PGHRAAAQA HGET                                                GAARREAWSQARREGAVGDGKMQGQR S  QR+IAPGVGGGG+ARN+RA+GVRSLEPTTR ARRRT V        AAASSRHPRQASG GG QAFDTDGSA GVG    SSSKLGRGGAVGPRISVRSNSGSNAR GRR GGD WAKPGATRKP SISNSRSRQ PSTAS GE VT RGRGGTRSG G KTARSALSKDSRA GSGGG+PNGN RSPSSYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGK  DRG GED EDDEIRDVD IA DDHVLGYGD  SGG+GTFVSPLSTAGILHRISSSR  XXXXXXXXXXXXXXXX SG V  GD PQHQAGAPRNQWQ S+PGVRE+G
Sbjct:   28 GRVREAQHRKGSVASGELLSYHAPMAQMQIPPGTRNRHQAHDVPTTTY-AQLAWPPKGTSPEDGGPKLDDRQYGRNHCPPRSMPSAVAMDDDPAPRSPARPGPEESLPTAANPSDVLLVDLGSRLLLQEDLEKALRLWTRPSILIAGRNSLDRLPANVPGTILYLDLSWNRRVRSRYILLGATQHFPCPPLCSHPNQRLASLEGFAALPNLRELDVSHNSVQDMLGLGSNVNLRVLRISYNXXXXXXXXXXXXXXXXXXXXXXXLKTKEDVRALSLNAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMRLLDGKPPQVLSLSLSSTMPLXXXXXXXXXGKPADHHRHNSRRMPHRTSRGPPSSCSPDRRGSGSIREGFMAASSLDFVGDLSVERRWRDSAVAGKSLYPQFAPDSHQRAAASGGVRGGARARXXXXXXXXXGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKQGSTSRAVVDDPAAFTTAGVSNSSTLAPTQKGVVGTVATERQQQQQPGHRAAAQASHGETSVAAAYRPGKRRIPAGGAEVXXXXXXXXXXXAATASLLSYRGLSRAERGAARREAWSQARREGAVGDGKMQGQRASRWQRNIAPGVGGGGVARNKRAVGVRSLEPTTRSARRRTSVSGSQMCRVAAASSRHPRQASGTGGDQAFDTDGSAEGVGGGTSSSSKLGRGGAVGPRISVRSNSGSNARGGRRSGGDLWAKPGATRKPVSISNSRSRQTPSTASGGEAVTTRGRGGTRSGDGEKTARSALSKDSRAGGSGGGRPNGNDRSPSSYRFRTTLGRRGSQQPPRPPAPVASPWTPREDARPWGWDGGKEGDRGHGEDDEDDEIRDVDAIADDDHVLGYGDGSSGGKGTFVSPLSTAGILHRISSSRXXXXXXXXXXXXXXXXXXXSGAVLRGDCPQHQAGAPRNQWQDSDPGVRESG 979          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKE3_ECTSI0.000e+088.83Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JHT2_9PHAE0.000e+075.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 182..203
e-value: 350.0
score: 3.0
coord: 204..225
e-value: 0.79
score: 18.7
coord: 160..181
e-value: 390.0
score: 2.6
coord: 226..247
e-value: 290.0
score: 3.7
NoneNo IPR availablePANTHERPTHR15454NISCHARIN RELATEDcoord: 131..331
NoneNo IPR availablePANTHERPTHR15454:SF7SD03973Pcoord: 131..331
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 159..292
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 150..294
e-value: 3.4E-25
score: 90.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 162..183
score: 7.442
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 228..249
score: 5.317
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 206..227
score: 8.39
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 184..205
score: 6.842

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:383487..387715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17942.1mRNA_Ecto-sp6_S_contig89.17942.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 383487..387715 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17942.1 ID=prot_Ecto-sp6_S_contig89.17942.1|Name=mRNA_Ecto-sp6_S_contig89.17942.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=923bp
MGRVREAQHQKGSVASGELLPYYAPMAQMQIPAGTRNRHQEHDVPTTTYY
AQLAWPPKGMSPEDGAAKLDDRQYGRNHCPPRSMPSAMAMDDDPAPRSPA
RPGPEESLPTAANPSDVRLVDLGSRSLLQEDLEKALRLWTRPSILIAGRN
SLDRLPANVPGTILYLDLSWNRLASLEGFAALPNLRELDVSHNSVQDMLG
LVSNVDLRVLRISHNRIRRIEGIHQLKRLEEVDFSHNLLKTKVDVRALSL
NAALRRLRIEGNPYCSTGVQHGTYQIALQHLLPGMSLLDGKPPPVLSLSL
SSTMPLPPPPRPPAPGKPGEHHRHNSRRMPHRTSRGAPSSCSPDRRGSGS
IREGFTASSSLDFVGDLSVERRWRDSAVAGRSLYPQFTPDSHQRAVARGG
VRGGARVRGGGDGDGGRGREPCIKVTTGGGGPTVAPGSYAEIFVAAMRKE
GSTSRVGVDDPAATTTTGVSNSSTLAPTQKGAAGAAATQRQPQQPPGHRA
AAQAPHGETGAARREAWSQARREGAVGDGKMQGQRTSHRQRSIAPGVGGG
GIARNRRALGVRSLEPTTRLARRRTPVAAASSRHPRQASGAGGGQAFDTD
GSAGGVGGGTSSSSKLGRGGAVGPRISVRSNSGSNARAGRRVGGDSWAKP
GATRKPASISNSRSRQIPSTASRGETVTVRGRGGTRSGGGGKTARSALSK
DSRAEGSGGGKPNGNVRSPSSYRFRTTLGRRGSQQPPRPPAPVASPWTPR
EDARPWGWDGGKGSDRGGGEDAEDDEIRDVDTIAHDDHVLGYGDRGSGGE
GTFVSPLSTAGILHRISSSRRSSAVAAGLSAPPSAAAASSGTVQTGDRPQ
HQAGAPRNQWQHSEPGVRETGGRGASSAAATEAVFRGGTSKRKRPRLFSF
RRRRRRWERGSANGRDVPRRSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt