prot_Ecto-sp6_S_contig89.17931.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17931.1
Unique Nameprot_Ecto-sp6_S_contig89.17931.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length986
Homology
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BLAST of mRNA_Ecto-sp6_S_contig89.17931.1 vs. uniprot
Match: D8LKF7_ECTSI (TFIIS central domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKF7_ECTSI)

HSP 1 Score: 1335 bits (3455), Expect = 0.000e+0
Identity = 799/845 (94.56%), Postives = 802/845 (94.91%), Query Frame = 0 
Query:   70 LTEALRWRAACLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNLSAWSKSGDTTGQEKKGMPTASXXXXXXXXSSGSGRELVAQIVAAGVRSLGWHSWRVLAARAAFPAPPGSNLSPPAKPTLADGHALLDAVISPGNGSGGSGAKPVAVLEGAALATAAASAEFAALREAVAAKDAAATMAWKWRDAPTSGSGXXXXXXAFPAPXSTXXXXXXXXXXXXXQRRHVVAEWETWRKSASGLVEGMEGVLAGVVDAAPSLRSALESQLQARIEAGRWLVASGGVLFPTGGRIPTLASTETLVQTPPPPSFSATAPYKPGDDALPVGDDPASDGASAAAAVNQRQSAAVFADVLAGLQELRGEASSWLMEARGLLAGAGGXXXXXXXAAVAMTDGSAKAVEALLARDVVRAMQLPEQKLLRDALQSHGQWDPKVLAILTVPVAAGGGVDSGGWLAPARTLLAQAPTTLPPGSSHLALLRWTIAVGETAQVMLAATTGGAMSFNESRPAFTDMEPLAERGRTLLLGGTGVATLLSAVGIAPPAGVVPLLAAAPPAPLSLRLGDGPLTALSTVEAVTRGVDACRQWVAGATALVSPGGXXXXXLDGASSSRLVQELQANRQLPYAVDGAGFGGGLRATLAHELSLKAPEHPELAHHLGSSVGSFGGVANGIVDDEDDAEGMAGAIDMSDVGWASSSDLDSAMAAIDVVGAATTTEAPPRPPAPAVYPLAREQHRHSGATPAGSRGXXXXXXXXXNGGTISARAAGLQTASVARAVPPPLFTNPAAPTTRGSRNQRTSPFNLKACSACKKGRISAIKCRVDCGPDGERPGSPHNARTAAAAAAVRDA 914
            LTEALRWRAACLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNLSAWSKSGDTTGQEKKGMPT  XXXXXXXX  GSGRELVAQIVAAGVRSLGWHSWRVLAARAAF A PGSN SPPAKPTLADGHALLDAVISPGNGSGGSGAKPVAVLEGAALATAAASAEFAALREAVAAKDAAATMAWKWRDA TSGSG      AFPAP ST             QRRHVVAEWETWRKSASGLVEGMEGVLAGVVDAAPSLRSALE QLQARIEAGRWLVASGGVLFPTGGRIPTL STETLVQTPPPPSFSATAPYKPGDDALPVGDDPASDGAS AAA NQRQSAAVFADVLAGLQELRGEASSWL EARGLLAGAGGXXXXXXXAAVAMTDGSAKAVEALLARDVVRAMQLPE+KLLRDALQSHGQWDPKVLAILTVPVAAGGGVDSGGWLAPARTLLAQAPTTLPPGSSHLALLRWTIAVGETAQVMLAATTGGAMSFNESRPAFTDMEPLAERG+TLLLGGTGVATLLSAVGIAPPAGVVPLLAAAPPAPLSLRLGDGPLTALSTVEAVTRGVDACRQWVAGATAL SPGGXXXXXLDGASS+RLVQELQANRQLPYAVDGAGFGGGLRATLAHELSLKAPEHPELAHHLGSSVGSFGGVANGIVDDEDDAEGMAGAIDMSDVGWASSSDLDSAMAAIDVVGAATTTEAPP  PAPAVYPLAREQHRHSGATPAGSRGXXXXXXX  NGGTISARAAGLQTASVARAVPPPLFTNPAAPTTRGSRNQRTSPFNLKACSACKKGRIS     VDCGPDGERPGSPHNARTAAAAAAVRDA
Sbjct:    2 LTEALRWRAACLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNLSAWSKSGDTTGQEKKGMPTXXXXXXXXXXXXGSGRELVAQIVAAGVRSLGWHSWRVLAARAAFNALPGSNPSPPAKPTLADGHALLDAVISPGNGSGGSGAKPVAVLEGAALATAAASAEFAALREAVAAKDAAATMAWKWRDAATSGSGGGGWGRAFPAPPSTTWKEAVAVAAGGGQRRHVVAEWETWRKSASGLVEGMEGVLAGVVDAAPSLRSALEVQLQARIEAGRWLVASGGVLFPTGGRIPTLDSTETLVQTPPPPSFSATAPYKPGDDALPVGDDPASDGASVAAAANQRQSAAVFADVLAGLQELRGEASSWLTEARGLLAGAGGXXXXXXXAAVAMTDGSAKAVEALLARDVVRAMQLPEEKLLRDALQSHGQWDPKVLAILTVPVAAGGGVDSGGWLAPARTLLAQAPTTLPPGSSHLALLRWTIAVGETAQVMLAATTGGAMSFNESRPAFTDMEPLAERGKTLLLGGTGVATLLSAVGIAPPAGVVPLLAAAPPAPLSLRLGDGPLTALSTVEAVTRGVDACRQWVAGATALASPGGXXXXXLDGASSARLVQELQANRQLPYAVDGAGFGGGLRATLAHELSLKAPEHPELAHHLGSSVGSFGGVANGIVDDEDDAEGMAGAIDMSDVGWASSSDLDSAMAAIDVVGAATTTEAPPPAPAPAVYPLAREQHRHSGATPAGSRGXXXXXXXR-NGGTISARAAGLQTASVARAVPPPLFTNPAAPTTRGSRNQRTSPFNLKACSACKKGRIS-----VDCGPDGERPGSPHNARTAAAAAAVRDA 840
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKF7_ECTSI0.000e+094.56TFIIS central domain-containing protein (Fragment)... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:228484..235907 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17931.1mRNA_Ecto-sp6_S_contig89.17931.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 221689..236060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17931.1 ID=prot_Ecto-sp6_S_contig89.17931.1|Name=mRNA_Ecto-sp6_S_contig89.17931.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=986bp
MEALLAEVEVELKVSGVPEAMELSRLLEEASAWEAEVRRAATGAGSSSTS
MEDLIALARRGERIVSPPQLTEALRWRAACLQAAAAAAAPSSAAAAAVTQ
PEAAGGVAALLAAGDNLSAWSKSGDTTGQEKKGMPTASSGAAAAAGSSGS
GRELVAQIVAAGVRSLGWHSWRVLAARAAFPAPPGSNLSPPAKPTLADGH
ALLDAVISPGNGSGGSGAKPVAVLEGAALATAAASAEFAALREAVAAKDA
AATMAWKWRDAPTSGSGGGGWGGAFPAPPSTTWKEAVAVAAGGGQRRHVV
AEWETWRKSASGLVEGMEGVLAGVVDAAPSLRSALESQLQARIEAGRWLV
ASGGVLFPTGGRIPTLASTETLVQTPPPPSFSATAPYKPGDDALPVGDDP
ASDGASAAAAVNQRQSAAVFADVLAGLQELRGEASSWLMEARGLLAGAGG
GGKAGGGAAVAMTDGSAKAVEALLARDVVRAMQLPEQKLLRDALQSHGQW
DPKVLAILTVPVAAGGGVDSGGWLAPARTLLAQAPTTLPPGSSHLALLRW
TIAVGETAQVMLAATTGGAMSFNESRPAFTDMEPLAERGRTLLLGGTGVA
TLLSAVGIAPPAGVVPLLAAAPPAPLSLRLGDGPLTALSTVEAVTRGVDA
CRQWVAGATALVSPGGGGGGGLDGASSSRLVQELQANRQLPYAVDGAGFG
GGLRATLAHELSLKAPEHPELAHHLGSSVGSFGGVANGIVDDEDDAEGMA
GAIDMSDVGWASSSDLDSAMAAIDVVGAATTTEAPPRPPAPAVYPLAREQ
HRHSGATPAGSRGGGGGGAAARNGGTISARAAGLQTASVARAVPPPLFTN
PAAPTTRGSRNQRTSPFNLKACSACKKGRISAIKCRVDCGPDGERPGSPH
NARTAAAAAAVRDAVLAAKAAAAAAATGAGPGRGRARPRPRARPRSSTAC
WGRQRCRRRRPRRSSGQRCPLPGSRPARPPSGAPG*
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