prot_Ecto-sp6_S_contig89.17914.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17914.1
Unique Nameprot_Ecto-sp6_S_contig89.17914.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length249
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17914.1 vs. uniprot
Match: D8LKG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG8_ECTSI)

HSP 1 Score: 428 bits (1100), Expect = 1.840e-150
Identity = 215/248 (86.69%), Postives = 222/248 (89.52%), Query Frame = 0
Query:    1 MSQDNPTYVPVGGELDEGRPVALPLHRQRDARGVVPPSRGRRKEWWWQPGPVDTVGFCWDLDMGVGIHAACELVYGILAFASICHRLAADTSTVEAQEKEEEFARDCKGLEQMPYKCERLIDSILELTLPNDTLVPNVLEAAMMLMLGWLGLRAWWCHDARAAKFNLWLRPLMCLMVAVVMAIKVTKAMSYGRHPVWGVLVFVLLRMVWFMMYFSKVMWSYHIFLLKKTSRATGEVGMVELDATSPTV 248
            M Q NP YV VGGE DEGRPVALPLHRQRDARGVVPPSRGRRKEWWWQPGPVDTVGFCWDLDMGVG++A  ELVYGILAFASI HRLAADTSTV  QEKEEEFARDC+GLEQMPYKCERLI SILELTL NDTLVPNVL AA++LMLGWLGLRAWWC DARAAKFNLWLRPLM LM AVVMAI+VTK MSYGRHPVW + VF LL MV  MMY SKVMWSYHIFLLKKTSRAT E GMVELDATSPTV
Sbjct:    1 MPQGNPVYVRVGGEFDEGRPVALPLHRQRDARGVVPPSRGRRKEWWWQPGPVDTVGFCWDLDMGVGLNAVGELVYGILAFASIGHRLAADTSTVVVQEKEEEFARDCEGLEQMPYKCERLIGSILELTLANDTLVPNVLAAAVLLMLGWLGLRAWWCFDARAAKFNLWLRPLMFLMSAVVMAIRVTKEMSYGRHPVWDLYVFWLLLMVLSMMYSSKVMWSYHIFLLKKTSRATREAGMVELDATSPTV 248          
BLAST of mRNA_Ecto-sp6_S_contig89.17914.1 vs. uniprot
Match: D8LNW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNW6_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 2.220e-23
Identity = 80/248 (32.26%), Postives = 121/248 (48.79%), Query Frame = 0
Query:    8 YVPVGGELDEGRPVALPLHRQRDARGVVPPSRGRRKEWWWQPGPVDTVGFCWDLDMGVGIHAACEL-VYGI--LAFASICHRLAADTSTVEAQEKEEEFARDCKGLEQMPYKCERLIDSILELTLPNDTLVPNVLEAAMMLMLGWLGLRAWWCHDARAAKFNLWLRPLMCLMVAVVMAIKVTKAMSYGRHPVWGVLVFVLLRMVWFMMYFSKVMWSYHIFLLKKTSRATGEV----GMVELDATSPTV 248
            YVPVG E D GRP+   + R     GV       RK+WWWQPGPVD+    + L  GV + AA ++ V G   L + S     A     +   EK+  +A +C+ + +    C      IL L   ND  VP VL+  +  + G++GLRA + HDA AA+  LW  P   ++  V + ++  +   Y    +WG  V   +  V  + Y  KV WSY + ++++ +RA        G +ELD +  +V
Sbjct:   11 YVPVGSEFDGGRPLGERV-RFNGVGGV-------RKDWWWQPGPVDSXXXXFSLAAGVAVLAALDIIVLGAMRLYYVSFVTGDAGLKQLLAGFEKK--YAEECEDVAEASADCLAQASIILSLNKTNDLYVPAVLQGVIAAIFGFVGLRAVFAHDALAARAYLWSWPPRIVLTLVELVMQRIRFERYDMGFLWGFTVVWNIPRVLILAYCLKVAWSYWV-VVRRNNRAAATAADTSGSIELDGSRSSV 247          
BLAST of mRNA_Ecto-sp6_S_contig89.17914.1 vs. uniprot
Match: D8LNW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW7_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 3.260e-10
Identity = 68/209 (32.54%), Postives = 103/209 (49.28%), Query Frame = 0
Query:   40 GRRKEWWWQPGPVDTVGFCWDLDMGVGIHAACEL-VYGILA-FASICHRLAADTSTVEAQEKEEEFARDCKGLEQMPYKCERLIDSI----LELTLPNDTLVPNVLEAAMMLMLGWLGLRAWWCHDARAAKFNLW--LRPLMCLMVAVVMAIKVTKAMSYGRHPVWGVLVFVLLRMVWFMMYFSKVMWSYHIFLLKKTSRATGEVGMVE 240
            G R++WWWQPGPVD+  FC  L  GVGI AA +L + GI + F S  H      + +E  +    + +DCK        C +L  +I     E+ L ++  V   +EA + ++ G +GL A +  +A +AK  LW  L      +VA      V K          GV++  L+ +V F+ YF KV WS+H  L  ++  ++   G VE
Sbjct:   24 GVRRQWWWQPGPVDSCCFCCSLRAGVGILAANDLFLNGIWSTFYSRSHIEKMLHAAIEILQSV--YDKDCKDAPVQTEDCLQLSHNIEQAEFEVELFDNLPVIVYVEAIIAMLAGAVGLFAVFKSNALSAKIYLWMWLPRFFVGLVAKYTLRAVMKQYGIDNSDGPGVVIGHLVDVVVFL-YFVKVAWSFHQRLKARSGNSSSPSGGVE 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKG8_ECTSI1.840e-15086.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNW6_ECTSI2.220e-2332.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNW7_ECTSI3.260e-1032.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 156..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..183
NoneNo IPR availableTMHMMTMhelixcoord: 196..215
NoneNo IPR availableTMHMMTMhelixcoord: 166..183
NoneNo IPR availableTMHMMTMhelixcoord: 134..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:60495..86185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17914.1mRNA_Ecto-sp6_S_contig89.17914.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 60495..86754 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17914.1 ID=prot_Ecto-sp6_S_contig89.17914.1|Name=mRNA_Ecto-sp6_S_contig89.17914.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=249bp
MSQDNPTYVPVGGELDEGRPVALPLHRQRDARGVVPPSRGRRKEWWWQPG
PVDTVGFCWDLDMGVGIHAACELVYGILAFASICHRLAADTSTVEAQEKE
EEFARDCKGLEQMPYKCERLIDSILELTLPNDTLVPNVLEAAMMLMLGWL
GLRAWWCHDARAAKFNLWLRPLMCLMVAVVMAIKVTKAMSYGRHPVWGVL
VFVLLRMVWFMMYFSKVMWSYHIFLLKKTSRATGEVGMVELDATSPTV*
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