prot_Ecto-sp6_S_contig89.17912.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig89.17912.1
Unique Nameprot_Ecto-sp6_S_contig89.17912.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length413
Homology
BLAST of mRNA_Ecto-sp6_S_contig89.17912.1 vs. uniprot
Match: D8LKH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH2_ECTSI)

HSP 1 Score: 731 bits (1888), Expect = 1.160e-263
Identity = 397/412 (96.36%), Postives = 397/412 (96.36%), Query Frame = 0
Query:    1 MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKKSASSSSRRLRRGASGINSSVLGGRTDEDPADRRPPQPTPKAISTRTETATAAAGALRRWYPREPCPGPAACSRRRKASTTAVAPSDLAAAXXXXXXVAGRGLTARGRTVAGAVMVSGGRFRAKSSGGWNVGAAAVTERERPSAAVVGERGRVSWRRRWPLPRPRCPQREAAARTGGRTATATTMARAP 412
            MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKKSASSSSRRLRRGASGINSS  G  TDEDPAD RPPQPTPKAISTRTETATAAAGALRRWYPREPCPGPAACSRRRKASTTAVAPSDLAAA      VAGRGLTARGRTVAGAVMVSGGRFRAKSSGGW  GAAAVTER RPSAAVVGERGRVSWRRRWPLPR RCPQREAAARTGGRTATATTMARAP
Sbjct:    1 MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKKSASSSSRRLRRGASGINSSSRGSGTDEDPADHRPPQPTPKAISTRTETATAAAGALRRWYPREPCPGPAACSRRRKASTTAVAPSDLAAAA-----VAGRGLTARGRTVAGAVMVSGGRFRAKSSGGWTAGAAAVTERARPSAAVVGERGRVSWRRRWPLPRRRCPQREAAARTGGRTATATTMARAP 407          
BLAST of mRNA_Ecto-sp6_S_contig89.17912.1 vs. uniprot
Match: A0A6H5JH79_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH79_9PHAE)

HSP 1 Score: 302 bits (773), Expect = 7.130e-99
Identity = 161/179 (89.94%), Postives = 164/179 (91.62%), Query Frame = 0
Query:   72 DRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQ----DRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKKSASSSSRRLRRGASGINSSVLG 246
            DRQERL AKRRARRIVRVLYYAMKVVGV AC YTSGLNATLVYMRPDFG +      LVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWF LELASFVALQT+G MA+VLNVCLREVLERSGA GKRRGKKSASSSSRRLRRGASGINSS  G
Sbjct:    8 DRQERLAAKRRARRIVRVLYYAMKVVGVGACFYTSGLNATLVYMRPDFGRELLASSLLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFSLELASFVALQTVGVMALVLNVCLREVLERSGALGKRRGKKSASSSSRRLRRGASGINSSSRG 186          
BLAST of mRNA_Ecto-sp6_S_contig89.17912.1 vs. uniprot
Match: A0A6H5JBH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH1_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 3.110e-31
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0
Query:    1 MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGASKSERRLLMEAKAGVGAAIAE 71
            MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRT SSVGRSAKSRGGS GASKSERRLLMEAKAGVGAAIAE
Sbjct:    1 MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTASSVGRSAKSRGGSRGASKSERRLLMEAKAGVGAAIAE 71          
BLAST of mRNA_Ecto-sp6_S_contig89.17912.1 vs. uniprot
Match: A0A835YSD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD9_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.810e-16
Identity = 74/189 (39.15%), Postives = 98/189 (51.85%), Query Frame = 0
Query:   68 AIAEDRQERLIAKRRARRIVRVLYYAMKVVGVAACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKANFRALQKWWFKAPFYVFMA-----WLCFDASLSRGTVWFPLELASFVALQTMGAMAVVLNVCLREVLERSGAFGKRRGKK-------SASSSSRRLRRGASGINSSV 244
            A+ E  +E  IA+RRAR  V   Y+ +K   VA  V     N  ++  R +  L++R VR YL+ F +  +LAELDT FA+ NFRALQKWW KA FYVF+      W    A L R      L+LA+   L  +    V L  CLR +LE++     R+ K        + SSSSRR  +G S   SS 
Sbjct:   73 AMEEVAREAAIARRRARACVTYSYWVLKSTAVATHVLMITTNVWVLARRHEPDLRERAVRGYLIPFSLAALLAELDTRFARDNFRALQKWWCKALFYVFLGTVNLGWTPLGA-LGRPLT--RLQLATAGVLCALALGNVALYTCLRRLLEKTVLRKLRKAKALKSGDPTAKSSSSRRRSKGTSRHRSSA 258          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig89.17912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKH2_ECTSI1.160e-26396.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH79_9PHAE7.130e-9989.94Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JBH1_9PHAE3.110e-3197.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSD9_9STRA2.810e-1639.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 186..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 212..412
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 163..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..162
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig89contigEcto-sp6_S_contig89:42224..51381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig89.17912.1mRNA_Ecto-sp6_S_contig89.17912.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig89 40295..51381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig89.17912.1 ID=prot_Ecto-sp6_S_contig89.17912.1|Name=mRNA_Ecto-sp6_S_contig89.17912.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=413bp
MSWAEPADMDTLSELPRQSMVGSSGRPPKLSRTTSSVGRSAKSRGGSGGA
SKSERRLLMEAKAGVGAAIAEDRQERLIAKRRARRIVRVLYYAMKVVGVA
ACVYTSGLNATLVYMRPDFGLQDRLVRSYLVLFGVGGVLAELDTPFAKAN
FRALQKWWFKAPFYVFMAWLCFDASLSRGTVWFPLELASFVALQTMGAMA
VVLNVCLREVLERSGAFGKRRGKKSASSSSRRLRRGASGINSSVLGGRTD
EDPADRRPPQPTPKAISTRTETATAAAGALRRWYPREPCPGPAACSRRRK
ASTTAVAPSDLAAAAAAAAAVAGRGLTARGRTVAGAVMVSGGRFRAKSSG
GWNVGAAAVTERERPSAAVVGERGRVSWRRRWPLPRPRCPQREAAARTGG
RTATATTMARAP*
back to top