prot_Ecto-sp6_S_contig88.17888.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig88.17888.1
Unique Nameprot_Ecto-sp6_S_contig88.17888.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length239
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: D7FZR3_ECTSI (Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR3_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 5.070e-113
Identity = 219/238 (92.02%), Postives = 220/238 (92.44%), Query Frame = 0
Query:    1 MKLLWCFFALLTSGGDSFVSPFVPAAVSSATTAGRGRSHPLDARARAAPPTPATRTAMSVSSEKRTGLGAAVASWTLAAVLMAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 238
            MKLLWCFFALLTSGGDSFVSPFVPAAVSSATTAGRGRS PLDAR                 SEKRTGLGAAVASWTLAAVL+AGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF
Sbjct:    1 MKLLWCFFALLTSGGDSFVSPFVPAAVSSATTAGRGRSQPLDARXXXXXXXXXXXXXXXXXSEKRTGLGAAVASWTLAAVLVAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 238          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: A0A6H5KFC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC5_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.830e-76
Identity = 165/181 (91.16%), Postives = 168/181 (92.82%), Query Frame = 0
Query:   58 MSVSSEKRTGLGAAVASWTLAAVLMAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 238
            MS+SSE+RTGLGAAVASWTLAAVLMAGVPLLV+PSP  AISGGGLDYAGLNLTGQDLS GKYKSK       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   DLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF
Sbjct:    1 MSMSSEQRTGLGAAVASWTLAAVLMAGVPLLVDPSPVAAISGGGLDYAGLNLTGQDLSNGKYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF 181          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: A0A1E7ER21_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ER21_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.040e-17
Identity = 44/127 (34.65%), Postives = 60/127 (47.24%), Query Frame = 0
Query:  109 LTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            ++ QD S   YK KDF+  +A                                   E  ++E  ++TNA+A+G+YF  N+     +   DFTDA I   +  +LC RPD KGTNPTTG DTRDS +C
Sbjct:    1 ISNQDFSNQNYKLKDFTQVLARKTNFQKSIFTGCRFQNAYLIDADFGSADLRGVSFERTNMENVVLTNAIASGAYFDQNLLEAKSVENVDFTDAQIPDKILPVLCERPDMKGTNPTTGVDTRDSAMC 127          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: A0A7S0AXB9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AXB9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.440e-17
Identity = 89/145 (61.38%), Postives = 101/145 (69.66%), Query Frame = 0
Query:   93 PAVAISGGGLDYAGLNLTGQDLSKGK--YKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            PA A+SGGGLDYA L++TGQD S     YK KDFS  IA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            AVA GSYFG ++ +V  +   DF+DA I      ++C R D KGTNP TG DTR+SL+C
Sbjct:   83 PAGAVSGGGLDYANLDITGQDFSNEAKTYKGKDFSQVIAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAVGSYFGQSLLDVKTMENGDFSDAQIPVKTLPLVCEREDVKGTNPVTGVDTRESLMC 227          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: K0TQX1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX1_THAOC)

HSP 1 Score: 87.8 bits (216), Expect = 1.860e-17
Identity = 71/154 (46.10%), Postives = 88/154 (57.14%), Query Frame = 0
Query:   82 MAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            +A   + + P    A+SGGG+DYA LNLT                   XXXXXXXXXXXXXXXXXXX     X          E+  ++G  + N VA+GSYFG ++ +V  + G DFTDA I     K++C R D KGTNPTTG DTRDSL+C
Sbjct:   70 LAAASIALGPLACGAVSGGGMDYANLNLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVNADXSGADARGAAFEDTSMDGANLRNIVASGSYFGQSLLDVESLEGGDFTDAQIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 223          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: A0A6U6FCS6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FCS6_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 4.850e-17
Identity = 57/147 (38.78%), Postives = 75/147 (51.02%), Query Frame = 0
Query:   89 VNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            ++ +PAVA+SGGGLDYAGL+++      G YK KDF+  +A                            XXXXXXX           +A   G YFG ++ +V  +  ADF+DA I      ++C R D KGTNP TG DTRDSL+C
Sbjct:   75 LSAAPAVAVSGGGLDYAGLDISXXXXXNGNYKGKDFTQVLAKATSFAKSNLQGCRFYKAYLVNVDFTGSXXXXXXXXXXXXXXXXXXDAQLQGVYFGQSLIDVQSMENADFSDASIPTKTLPLVCDRDDVKGTNPVTGVDTRDSLMC 221          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: A0A7S2I9G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I9G5_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.250e-16
Identity = 64/162 (39.51%), Postives = 81/162 (50.00%), Query Frame = 0
Query:   76 TLAAVLMAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGK--YKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            TLAA L   +   ++P  A A+SGGG D+A L++TGQD +     YK KDFS  IA                           XXXXXXXX                G+YF  ++ +V  I  ADFTDA I   +   +C R DAKGTNP++G DTRDSL+C
Sbjct:   71 TLAASLFVILSTAISPPAANAVSGGGKDFANLDITGQDFANNSKDYKGKDFSQVIAKGTQFMNSNLQGCRFYKAYLVNADFSGXXXXXXXXXXXXXXXXXXXXXXXAGAYFSQSLLDVKTIENADFTDAQIPIKILPQICEREDAKGTNPSSGADTRDSLMC 232          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: B8LCL5_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCL5_THAPS)

HSP 1 Score: 82.0 bits (201), Expect = 3.640e-14
Identity = 54/159 (33.96%), Postives = 73/159 (45.91%), Query Frame = 0
Query:   78 AAVLMAGVPLLVNP-SPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            A+ +  GV LL    S A A+SGGGLDYAG+++            KDF+                                       E+  ++   + + VA GSYFG ++ +V  +   DFTDA I     K++C R D KGTNPTTG DTRDSL+C
Sbjct: 2408 ASTVAVGVMLLSTVGSTAWAVSGGGLDYAGIDIXXXXXXXXXXXXKDFT-----------------------QVNTNFEGADVRGVSFEDTSMDNANLKDIVAVGSYFGQSLVDVKTLENGDFTDATIPPKTLKLVCDREDVKGTNPTTGADTRDSLMC 2543          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: A0A7S0UFP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFP4_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.570e-14
Identity = 78/160 (48.75%), Postives = 91/160 (56.88%), Query Frame = 0
Query:   76 TLAAVLMAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            T AA+L+A    +     A A+SGGGLD+AGL+++ QD SKG YK KDF+  +A          XXXXXXXXXXXXXXXXXXXXXXXXXE                              GADFTDA        ++C RPD KGTNPTTG DTRDS +C
Sbjct:  113 TAAALLLASSTFV---QAAFAVSGGGLDFAGLDISNQDFSKGDYKGKDFTQVLARNTNFAGSNLXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADFTDAQFPPKTLALMCDRPDMKGTNPTTGVDTRDSAMC 269          
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Match: A0A150GZX6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZX6_GONPE)

HSP 1 Score: 70.9 bits (172), Expect = 1.680e-11
Identity = 74/167 (44.31%), Postives = 90/167 (53.89%), Query Frame = 0
Query:   72 VASWTLAAVLMAGVPLLVNPSPAVAISGGG---LDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235
            +A+  LA    A + L   P PA+A+SGGG      AG +LTGQDL K K       G++                   XXXXXXXXXXXXXXXXX     E    TNAV  G++  N       I+G+D+TD ++RKD+ K LCA  D  G NPTTG  TRDSLLC
Sbjct:   21 LAAGLLAVTSAAALSLAAAPLPALAVSGGGGVSESLAGKDLTGQDLRKFKLTK----GNLRKVTNFTNANLEGVSLFGSXXXXXXXXXXXXXXXXXXXXXYEFADFTNAVLEGAFVNNAQFVKVTITGSDWTDVILRKDIQKELCAIAD--GVNPTTGVATRDSLLC 181          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZR3_ECTSI5.070e-11392.02Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KFC5_9PHAE1.830e-7691.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1E7ER21_9STRA1.040e-1734.65Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S0AXB9_9STRA1.440e-1761.38Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K0TQX1_THAOC1.860e-1746.10Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6U6FCS6_9STRA4.850e-1738.78Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2I9G5_9STRA2.250e-1639.51Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8LCL5_THAPS3.640e-1433.96Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S0UFP4_9STRA7.570e-1448.75Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A150GZX6_GONPE1.680e-1144.31Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 123..156
e-value: 7.4E-8
score: 31.9
NoneNo IPR availableGENE3D2.160.20.100coord: 98..238
e-value: 3.5E-31
score: 109.4
NoneNo IPR availablePANTHERPTHR47200FAMILY NOT NAMEDcoord: 69..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.735
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 102..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig88contigEcto-sp6_S_contig88:522399..526562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig88.17888.1mRNA_Ecto-sp6_S_contig88.17888.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig88 522399..527672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig88.17888.1 ID=prot_Ecto-sp6_S_contig88.17888.1|Name=mRNA_Ecto-sp6_S_contig88.17888.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=239bp
MKLLWCFFALLTSGGDSFVSPFVPAAVSSATTAGRGRSHPLDARARAAPP
TPATRTAMSVSSEKRTGLGAAVASWTLAAVLMAGVPLLVNPSPAVAISGG
GLDYAGLNLTGQDLSKGKYKSKDFSGSIAKEVNFSGSDLRGVRFFKADLK
KADFTGANLGTASLEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFT
DALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLCDMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat