prot_Ecto-sp6_S_contig88.17887.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig88.17887.1
Unique Nameprot_Ecto-sp6_S_contig88.17887.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length213
Homology
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: D7FZR4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR4_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 7.060e-142
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query:    1 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARV 206
            MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARV
Sbjct:   88 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARV 293          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A835YWH7_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH7_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.260e-97
Identity = 143/204 (70.10%), Postives = 172/204 (84.31%), Query Frame = 0
Query:    1 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGA 204
            M+GGPY+L+K LRLWR +C DEG RSI+E+LRLGG ++KLEY+E+ D  +G TGA ALGQ+L+ GCN+SLLSLKLDYN +LGSEG  ALCRGLRTN++L+QLHLPYC +G DAGA LGEMLSY+KLQLAVLNLQGNRL  EG + L+PGLARN S+ YLSLADN IG    DV+AL  FRDA+++C+TL+HVDLLYNRIG  GA
Sbjct:   87 MKGGPYKLLKGLRLWRVNCADEGTRSISEILRLGGGDIKLEYLEMLDCRVGGTGALALGQALAAGCNRSLLSLKLDYNQTLGSEGARALCRGLRTNATLRQLHLPYCGVGGDAGAALGEMLSYSKLQLAVLNLQGNRLGGEGLRDLAPGLARNGSVTYLSLADNAIGGVARDVEALALFRDAILACTTLSHVDLLYNRIGPDGA 290          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A8J2X6V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X6V8_9STRA)

HSP 1 Score: 225 bits (574), Expect = 9.940e-70
Identity = 115/207 (55.56%), Postives = 144/207 (69.57%), Query Frame = 0
Query:    1 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMM-SCSTLTHVDLLYNRIGERGARV 206
            M G  +++ K+ R WR  CGD+GA  +AE+LRLGGAE+ + Y+E+ D  +G  GA ALGQSL  G N+SLL+LKLDYN SLGS+G  ALC+GLRTN+SLKQLHL YC L  DAGAPLGE+LSY K  L  L+LQGN++   G   +  G+  N  L YLSLADN I + D D++ALE     M    S L+ VDLL+NRIGE+GA  
Sbjct:   89 MSGAVFKMAKNFRFWRMDCGDDGAACLAEILRLGGAELPMAYLEMLDCGVGYRGAHALGQSLMCGQNRSLLTLKLDYNSSLGSDGCKALCQGLRTNASLKQLHLCYCGLDEDAGAPLGEVLSYAKTTLQKLHLQGNKMRGGGLSGILSGMDNNNKLEYLSLADNAIAATDEDLEALEQLAGVMQRETSLLSQVDLLHNRIGEKGANT 295          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A482S5Z2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5Z2_9ARCH)

HSP 1 Score: 223 bits (567), Expect = 3.100e-69
Identity = 122/212 (57.55%), Postives = 152/212 (71.70%), Query Frame = 0
Query:    1 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKAL-SPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMM-SCSTLTHVDLLYNRIGERGARVREEA 210
            M+GGPY+L+KSLRLWRA+CGD+GA +IAEVLRLGGA+V L Y+EL D+NI   GATALG SLS G N SLL+LKLDYN +LG +G  ALCRGLRTN SL+QLHL +C+L S +G  L ++L+ ++  L VLN+ GNRL  +G   L + GL  N     L+L+DN I   + D+  L   RD +M S S LT VDL+YNRIGERG  V  EA
Sbjct:   50 MKGGPYKLLKSLRLWRANCGDDGAAAIAEVLRLGGADVALTYLELLDNNISIRGATALGSSLSFGHNISLLTLKLDYNQTLGDDGLVALCRGLRTNMSLRQLHLQFCNLTSASGHALADLLANSRSALEVLNVAGNRLTGQGVYVLCTKGLVVNTKCETLNLSDNLIDQLEEDLAGLTALRDCLMTSTSGLTSVDLMYNRIGERGGLVLVEA 261          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A7S3HG08_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG08_9STRA)

HSP 1 Score: 221 bits (562), Expect = 5.700e-68
Identity = 112/211 (53.08%), Postives = 152/211 (72.04%), Query Frame = 0
Query:    1 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCS-TLTHVDLLYNRIGERGARVREEA 210
            M+GGPY+L+ SLR+WRA+C D+GA +IAE+LRLGGA+VKL ++ELFD+NIGP GA ALG +LS G N SLL+LKLDYN +LG EG   LC+GLRTN++LKQLHL +C+L S +G  L E+L+ ++  L V N+ GNRL  +G  +L  GL  N     + LADN I   + D+  L   ++ +++ +  LT VDL+YNRIGE GA++  EA
Sbjct:   90 MKGGPYKLLNSLRMWRANCSDDGAAAIAEILRLGGADVKLSFLELFDNNIGPKGANALGSALSYGHNLSLLTLKLDYNATLGDEGVINLCKGLRTNATLKQLHLQFCNLSSASGPALSEVLANSRSGLEVFNIGGNRLGGQGLASLCVGLMHNTKCETICLADNMIDQMEDDIIGLTALKECLLNPTLALTSVDLMYNRIGEAGAKILIEA 300          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A7S1XUG2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUG2_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.060e-56
Identity = 101/208 (48.56%), Postives = 141/208 (67.79%), Query Frame = 0
Query:    4 GPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGI-GSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVREEA 210
            GPY  + SLR+W    GD+G  ++AE+LRLGGAEVK+ Y+EL D  + P GA  LG++LS G N SLL+LKL+ N +LGS G AALCRGLR+NS LKQLHL +C++G D G PL E LSY++  L VL ++GNRL   G + L+ G+  N+SL  L ++DN I G    ++D L  F  A+ + +TL +V+++YNR+ + G    + A
Sbjct:  344 GPYTPLSSLRVWGGGLGDDGVSAVAEILRLGGAEVKISYLELLDSGVSPYGARMLGRALSYGSNMSLLTLKLNCNLNLGSAGVAALCRGLRSNSVLKQLHLEFCNIGPDGGGPLAEALSYSRTALQVLCMKGNRLGNVGLRDLATGIQLNQSLTTLDVSDNAINGYTFEEIDCLAAFAQAVKASTTLANVNIMYNRLTDGGGEALKPA 551          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A7R9U7G5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G5_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.310e-54
Identity = 101/209 (48.33%), Postives = 138/209 (66.03%), Query Frame = 0
Query:    1 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMS---CSTLTHVDLLYNRIGERGARV 206
            M G  Y  +K+L++WR++ G  G  +IAE+LRLGGA+++L  +EL D  +   GA ALG+SL+ G N SL  L+LDYNP +GSEG AAL RGLRTN SL++LH  +C LG +AG  L ++L +++  L VLN+QGNRLE  G   ++ GL  N +L+ L++ADN IG+ + DV AL      + S    S LT VDL +NRIG  G  V
Sbjct:   77 MLGDVYTALKTLKIWRSNLGASGVSAIAELLRLGGADLQLALLELVDAGVEIDGAVALGRSLATGMNVSLRILRLDYNPGIGSEGIAALSRGLRTNRSLEELHACFCSLGPEAGVFLADILEFSQSSLRVLNVQGNRLEGVGLNDVAHGLMENSALLELNVADNAIGNSELDVVALRVLAQVISSGNPISALTSVDLQHNRIGFEGGSV 285          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A7S2XX61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX61_9STRA)

HSP 1 Score: 164 bits (416), Expect = 7.690e-48
Identity = 77/109 (70.64%), Postives = 96/109 (88.07%), Query Frame = 0
Query:    1 MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDL 109
            M+GGPY+ +KSLRLWR + GD+GA+ +AE+LRLGG +V + Y+ELFD+NIGP GA ALG +LS G N+SL++LKLDYN SLG+EGTAALCRGLRTNS+LKQLHLPYC+L
Sbjct:   89 MQGGPYKKLKSLRLWRCNVGDDGAQCMAELLRLGGGDVVIPYLELFDNNIGPRGALALGNALSFGTNQSLMTLKLDYNISLGAEGTAALCRGLRTNSTLKQLHLPYCNL 197          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A024UFZ4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFZ4_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.180e-44
Identity = 88/203 (43.35%), Postives = 124/203 (61.08%), Query Frame = 0
Query:    4 GPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARV 206
            GPY+ + ++R+W    GDEGA +I+ +L  G A V + YVEL D +IGP G   L  +L       L +LKL+ N  +G++G  ALC+GL  N ++KQLHL +C++ SD G  L ++L   K  L  L+LQGN L   G   +S GL R++SLV L+++DNGI     DVDAL  FRDA++ C TLT +   +N I   GA +
Sbjct:   90 GPYQHLANVRVWNNAIGDEGASAISTLLSEGSALVNVLYVELMDCDIGPEGCAMLADALKPERKSPLQTLKLNCNNKIGNDGVYALCQGLFANHTIKQLHLDFCNVSSDGGVVLAQLLCMAKSALETLSLQGNMLGDAGLLNISKGLKRSQSLVKLNVSDNGIRK---DVDALTTFRDAILRCKTLTTIKFAFNFIDAEGADI 289          
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Match: A0A485LQC0_9STRA (Aste57867_24124 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQC0_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.460e-44
Identity = 93/203 (45.81%), Postives = 123/203 (60.59%), Query Frame = 0
Query:    4 GPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNIGPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARV 206
            GPY  + ++R+W    GDEGA +IA +L  G   V + YVEL D +IGP G T L  +L       L +LKL+ N  +G +G AALC+GL TN+++KQLHL +C + S     L ++LS  K  L  L+LQGN L  EG   LS GL R+ SLV L+L+DNGI     DV AL  FRDA+++C TLT V   +N I   GA +
Sbjct:   94 GPYMHLANVRVWNNPIGDEGASAIASLLCEGNNLVNILYVELMDCDIGPEGCTMLADALKAEKKAPLQALKLNCNSKIGDDGVAALCQGLFTNTTIKQLHLEFCKITSAGTIVLAQLLSMAKSGLQSLSLQGNLLGDEGLLHLSKGLKRSHSLVKLNLSDNGIRK---DVAALTAFRDAIVACKTLTSVKFSFNLIDIEGADI 293          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig88.17887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FZR4_ECTSI7.060e-142100.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A835YWH7_9STRA2.260e-9770.10Leucine rich repeat protein n=1 Tax=Tribonema minu... [more]
A0A8J2X6V8_9STRA9.940e-7055.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A482S5Z2_9ARCH3.100e-6957.55Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3HG08_9STRA5.700e-6853.08Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1XUG2_9STRA3.060e-5648.56Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U7G5_9STRA1.310e-5448.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2XX61_9STRA7.690e-4870.64Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A024UFZ4_9STRA1.180e-4443.35Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A485LQC0_9STRA3.460e-4445.81Aste57867_24124 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 6..33
e-value: 3.9
score: 13.0
coord: 153..178
e-value: 26.0
score: 7.2
coord: 67..95
e-value: 3.6
score: 13.2
coord: 96..123
e-value: 1.0
score: 17.1
coord: 125..152
e-value: 0.7
score: 18.3
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 9..211
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 9..211
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 9..204
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 103..208
e-value: 1.3E-21
score: 78.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 7..102
e-value: 1.0E-16
score: 62.9
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 153..168
e-value: 0.26
score: 11.5
coord: 185..204
e-value: 0.48
score: 10.6
coord: 128..147
e-value: 1.9
score: 8.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig88contigEcto-sp6_S_contig88:519186..520794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig88.17887.1mRNA_Ecto-sp6_S_contig88.17887.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig88 519186..520794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig88.17887.1 ID=prot_Ecto-sp6_S_contig88.17887.1|Name=mRNA_Ecto-sp6_S_contig88.17887.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=213bp
MRGGPYRLIKSLRLWRAHCGDEGARSIAEVLRLGGAEVKLEYVELFDDNI
GPTGATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLK
QLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGL
ARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIG
ERGARVREEAGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt