prot_Ecto-sp6_S_contig87.17827.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17827.1
Unique Nameprot_Ecto-sp6_S_contig87.17827.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1019
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17827.1 vs. uniprot
Match: D7G1L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L0_ECTSI)

HSP 1 Score: 882 bits (2278), Expect = 8.550e-306
Identity = 895/936 (95.62%), Postives = 901/936 (96.26%), Query Frame = 0
Query:   65 MAASDQDDGMGAAGVHTPPRRRSLGPEVAAPASGADPVGQWAPSTGSKHAAASSAASEQGRTPTTYSSMREGGQXXXXXXXRGVRRRRPGEGRGRGARRGTKKGRAAFARSRDFVVKIRGMSRWNWRGVMRELEEAETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAAGRAGALVPGGRVPLRPTVGTYGATMRALGMSGKWRESMEVFRELQGLAGQASGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEAGVEPNAITYHAMIAAHGNAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPRTADWAEALALFDQMPRKGIQHTPTSYSTAITVAGQCGLWEEAVALLDRIRRDRXXXXXXXXXXXXXXXXXXXXXXXGAVNNYVYAATITACGNNGQWEQALRLLREMSEAGVEADALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATRSGSAYDSVVRVYGKTPEAAAELVALVRAMDVPDFFAYSAAIAVCXXXXXXXXXXXXXXXXXXXXX-QPLKESNAKSVDSNEAPSSLSAAEAAADHPSTNSARPVVPNDGIDAPRLLREMSAAGLRPDEACFTNALSACRDRRQGKQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALRNDCDNSVAVXXXXXXXXXXXXPGLYVEAVRACRRVTKEEEVDALA 999
            MAASDQDDGMGAAGVHTPPRRRS+GPEVAAPASGADPVGQWAPSTGSKHAAASSAASEQGRTPTTYSSMREGGQXXXXXXXRGVRRRRPGEGRGRGARRGTKKGRAAFARSRDFVVKIRGMSRWNWRGVMRELEEAETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAAGRAGA+VPGGRVPLRPTVGTYGATMRALGMSGKWRESMEVFRELQGLAGQASGEG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEAGVEPNAITYHAMIAAHGNAAAA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   SPRTADWAEALALFDQMPRKGIQHTPTSYSTAITVAGQCGLWEEAVALLDRIRRDR            XXXXXXXXX  GAVNNYVYAATITACGNNGQWEQALRLLREMSEAGVEADALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAT SGSAYDSVV VYGKTPEAAAELVALVRAMDVPDFFAYSAAIAVCXXXXXXXXXXXXXXXXXXXXX QPLKE+NA SVDSNEAPSSLSA EAAADHPSTNSARPVVPNDGIDAPRLLREMSA+GLRPDEACFTNALSACRDRRQGKQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALRNDCDNSVAVXXXXXXXXXXXXPGLYVEAVRACRRVTKEEE+D L+
Sbjct:    1 MAASDQDDGMGAAGVHTPPRRRSVGPEVAAPASGADPVGQWAPSTGSKHAAASSAASEQGRTPTTYSSMREGGQXXXXXXXRGVRRRRPGEGRGRGARRGTKKGRAAFARSRDFVVKIRGMSRWNWRGVMRELEEAETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAAGRAGAVVPGGRVPLRPTVGTYGATMRALGMSGKWRESMEVFRELQGLAGQASGEGECGCVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEAGVEPNAITYHAMIAAHGNAAAAKVASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPP-SPRTADWAEALALFDQMPRKGIQHTPTSYSTAITVAGQCGLWEEAVALLDRIRRDRRDDDAERGTPGGXXXXXXXXXRRGAVNNYVYAATITACGNNGQWEQALRLLREMSEAGVEADALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATVSGSAYDSVVGVYGKTPEAAAELVALVRAMDVPDFFAYSAAIAVCXXXXXXXXXXXXXXXXXXXXXAQPLKENNATSVDSNEAPSSLSAGEAAADHPSTNSARPVVPNDGIDAPRLLREMSASGLRPDEACFTNALSACRDRRQGKQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALRNDCDNSVAVXXXXXXXXXXXXPGLYVEAVRACRRVTKEEEIDMLS 935          
BLAST of mRNA_Ecto-sp6_S_contig87.17827.1 vs. uniprot
Match: A0A6H5K890_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K890_9PHAE)

HSP 1 Score: 682 bits (1759), Expect = 1.560e-227
Identity = 806/943 (85.47%), Postives = 816/943 (86.53%), Query Frame = 0
Query:  133 MREGGQXXXXXXXRGVRRRRPGEGRGRGARRGTKKGRAAFARSRDFVVKIRGMSRWNWRGVMRELEEAETAEAKFGE-----------------------------------------------AEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAAGRAGALVPGGRVPLRPTVGTYGATMRALGMSGKWRESMEVFRELQGLAGQASGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-MEEAGVEPNAITYHAMIAAHGNAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR---------SPRTADWAEALALFDQMPRKGIQHTPTSYSTAITVAGQCGLWEEAVALLDRIRRDRXXXXXXXXXXXXXXXXXXXXXXXG-AVNNYVYAATITACGNNGQWEQALRLLREMSEAGVEADALTXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATRSGSAYDSVVRVYGKTPEAAAELVALVRAMDVPDFFAYSAAIAVCXXXXXXXXXXXXXXXXXXXXXQPLKESNAKSVDSNEAPSSLSAAEAAADHPSTNSARPVVPNDGIDAPRLLREMSAAGLRPDEACFTNALSACRDRRQGKQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALRNDCDNSVAVXXXXXXXXXXXXPGLYVEAVRACRRVTKEEEVDALAEELASLVGRERASTLLLP 1017
            MREGGQ   XXXX  VRRRRPGEGRGRGARRGT KGRAAFARSRDFV+KIRGMSRWNWRGVMRELEEAET EAKFGE                                               AEKG TGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGRAGA+VPGGRVPLRPTVGTYGATMRALGMSGKWRESMEVFRELQGLAGQA GE   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MEEAGVEPNAITYHAMIAA+GNAAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          SPRTADW EALALFDQMPRKGI+HTPTSYSTAITVAGQCGLWEEAVALLDRIRRDRXXXXXXXXXXXXXXXXX        A NNYVYAATITACGNNGQWEQALRLLREMSEAGVEADAL XXXXXXXXXXXXXXXXXXXXXXXXXXXXLAT SGSAYDS+V VYGKTPEAAAELVALVR MDVPDFFAYSAAIAVC                     Q LK+SNA SVDSNEAPSSLSA  AAADHPSTNSAR +VPNDGIDAPRLL+EMSAAGLRPDEACFTNALSACRDRRQGKQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SALRNDCDNS   XXXXXXXXXXXX       VRACRRV KEE+VDALAEELASLVGR+RASTLLLP
Sbjct:    1 MREGGQGGRXXXXXXVRRRRPGEGRGRGARRGTNKGRAAFARSRDFVMKIRGMSRWNWRGVMRELEEAETVEAKFGEGPRSRPSGAFFVFGSSETDVFSLVSGLARAMLVQTHTRTHTCDMTLQAEKGMTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRAGAVVPGGRVPLRPTVGTYGATMRALGMSGKWRESMEVFRELQGLAGQAPGEEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEEAGVEPNAITYHAMIAAYGNAAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRTADWVEALALFDQMPRKGIRHTPTSYSTAITVAGQCGLWEEAVALLDRIRRDRXXXXXXXXXXXXXXXXXVGPSGQRVAANNYVYAATITACGNNGQWEQALRLLREMSEAGVEADALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATVSGSAYDSIVGVYGKTPEAAAELVALVRGMDVPDFFAYSAAIAVCAAVAGVVPATPSAAATA----QALKDSNATSVDSNEAPSSLSAT-AAADHPSTNSARAIVPNDGIDAPRLLQEMSAAGLRPDEACFTNALSACRDRRQGKQALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSALRNDCDNSAXXXXXXXXXXXXXXXXXXXXXVRACRRVNKEEQVDALAEELASLVGRDRASTLLLP 938          
BLAST of mRNA_Ecto-sp6_S_contig87.17827.1 vs. uniprot
Match: A0A6H5J6J5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6J5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 4.860e-9
Identity = 39/99 (39.39%), Postives = 62/99 (62.63%), Query Frame = 0
Query:  166 KKGRAAFARSRDFVVKIRGMSRWNWRGVMRELEEAETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNA 264
            K+   A   S++FV K++ M   +WRGV+REL+ AE A     +A+      S+ R+++  Y SC+  +AK  RW EAL + +RM ARG+ PNS+C+++
Sbjct:   33 KRANIAGLHSKNFVQKVQCMRPTDWRGVLRELQIAEEAS----DAQP-----SESRITTFMYASCISRMAKARRWEEALDILQRMRARGLQPNSYCVSS 122          
BLAST of mRNA_Ecto-sp6_S_contig87.17827.1 vs. uniprot
Match: D7G0M5_ECTSI (PPR_long domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M5_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 5.140e-9
Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 0
Query:  168 GRAAFARSRDFVVKIRGMSRWNWRGVMRELEEAETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERMWARGVTPNSFCLNATLEACTAA 272
            GRA+F R++  + KI  + + +WR ++ EL++AE AE   G A           VS+  Y+ C+  +AKC RW EAL +  RM   G  PNS+C+NA L+AC  A
Sbjct:   72 GRASF-RTKLALDKIDAVRKDDWRRILVELDKAELAE---GRATTNNAKAPAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPNSYCVNAALDACGKA 172          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1L0_ECTSI8.550e-30695.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K890_9PHAE1.560e-22785.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6J5_9PHAE4.860e-939.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G0M5_ECTSI5.140e-940.00PPR_long domain-containing protein n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 746..849
e-value: 4.0E-23
score: 83.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 334..478
e-value: 1.4E-22
score: 82.6
coord: 479..665
e-value: 4.5E-32
score: 113.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 850..1015
e-value: 3.6E-31
score: 110.7
coord: 198..329
e-value: 7.7E-22
score: 80.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 824..883
e-value: 3.5E-12
score: 46.2
coord: 754..815
e-value: 1.2E-6
score: 28.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 387..433
e-value: 7.8E-13
score: 48.4
coord: 571..618
e-value: 7.3E-8
score: 32.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 295..321
e-value: 0.041
score: 14.1
coord: 915..939
e-value: 1.1
score: 9.7
coord: 516..543
e-value: 0.04
score: 14.2
coord: 343..368
e-value: 0.13
score: 12.6
coord: 226..255
e-value: 0.0018
score: 18.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 804..837
e-value: 4.5E-7
score: 27.6
coord: 841..873
e-value: 1.4E-5
score: 23.0
coord: 390..424
e-value: 5.6E-10
score: 36.8
coord: 226..258
e-value: 5.5E-6
score: 24.2
coord: 609..638
e-value: 0.0029
score: 15.7
coord: 910..943
e-value: 0.002
score: 16.2
coord: 874..907
e-value: 0.0016
score: 16.4
coord: 574..606
e-value: 1.4E-5
score: 22.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 293..327
score: 7.859
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 606..640
score: 10.424
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 477..512
score: 5.952
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 872..906
score: 10.698
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 258..292
score: 7.465
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 802..836
score: 11.882
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 340..374
score: 7.783
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 767..801
score: 8.451
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 13.581
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 513..543
score: 7.465
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..257
score: 10.863
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 837..871
score: 11.663
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 907..941
score: 9.109
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 571..605
score: 11.038
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 496..683
coord: 226..432
coord: 752..1002

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:482012..491494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17827.1mRNA_Ecto-sp6_S_contig87.17827.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 482012..492841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17827.1 ID=prot_Ecto-sp6_S_contig87.17827.1|Name=mRNA_Ecto-sp6_S_contig87.17827.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1019bp
MAFIAPSVGPGAAGAEAWRTAVHRRWVPTWWSPQQQRKQERLSCTPAHEQ
RTTLAARPSAKSSTMAASDQDDGMGAAGVHTPPRRRSLGPEVAAPASGAD
PVGQWAPSTGSKHAAASSAASEQGRTPTTYSSMREGGQGGRGGGGRGVRR
RRPGEGRGRGARRGTKKGRAAFARSRDFVVKIRGMSRWNWRGVMRELEEA
ETAEAKFGEAEKGTTGGSDGRVSSHAYNSCLMHLAKCSRWREALAVFERM
WARGVTPNSFCLNATLEACTAAGEWKRCLGLLERAKGAGLEVNEISYNIC
IAACGSGKQWQKALGLLRELDAAGRAGALVPGGRVPLRPTVGTYGATMRA
LGMSGKWRESMEVFRELQGLAGQASGEGEGGCVIAAPDVVTYTTLVAALG
ENGRTSEARQVWREMEEAGVEPNAITYHAMIAAHGNAAAAKAASSSAAAS
AAAASASANSAAAANASASASAAGRQRPAAAAAAAAARSPRTADWAEALA
LFDQMPRKGIQHTPTSYSTAITVAGQCGLWEEAVALLDRIRRDRRDDDDE
RGTPGGAGAAGGPRGRRGAVNNYVYAATITACGNNGQWEQALRLLREMSE
AGVEADALTYSAAISVLAREARLPEAFRLIREMSERGLATRSGSAYDSVV
RVYGKTPEAAAELVALVRAMDVPDFFAYSAAIAVCAAVAGVVPSTPAAAA
AAAATAQPLKESNAKSVDSNEAPSSLSAAEAAADHPSTNSARPVVPNDGI
DAPRLLREMSAAGLRPDEACFTNALSACRDRRQGKQALAILRDMEAAGVT
PDGVVYTLVMAACGGAGRWRDAVSLVREMTEKGVRPNLINYSVAISACAK
AGRHEPALELLAEMKDAGINPNTVTYSSAILACSASGQCGDAVGLLRDMS
KRGMSPSRTCYAPAITACARGSEPDIALSLLREMPTEGLVPDAVCYAAAL
SALRNDCDNSVAVLREMRDGGLAPAPGLYVEAVRACRRVTKEEEVDALAE
ELASLVGRERASTLLLPD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat