prot_Ecto-sp6_S_contig87.17824.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17824.1
Unique Nameprot_Ecto-sp6_S_contig87.17824.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length746
Homology
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BLAST of mRNA_Ecto-sp6_S_contig87.17824.1 vs. uniprot
Match: D7G0M4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M4_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 1.540e-122
Identity = 715/749 (95.46%), Postives = 716/749 (95.59%), Query Frame = 0 
Query:    1 MTVYMYTACITTMSKCKRWREALEVLDRMMAAAQEEGGGGELTPNVNTMSAXXXXXXXXXXXXXXXXXXXXXKTIGDEAGGLKPDXXXXXXXXXXXXXXXXXXXXXXXXDDLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPDVPVDVASFNXXXXXXXXXXXXXXXXXXXXEITAEGLAPGLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISMLRVGXXXXXXXXXXXXXXXXXXXXXXXXXRFLREMPQAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSLPMSSPWWSSSGAPRTGEARGXXXXXXXXXXXXXXNAEGPARSARSGRVPAAXXXXXXXXXXXXXXXXXXXXXXS----REAETGHYFYCRPNVATFNAAMQAAGSAGEWREALTLLRSMLAEKIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEADVGLETPSSSTTRTTSRPDVTTXXXXXXXXXXXXXXXXXXXXXXXXPTVGITPSGISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSGGGDVVRXXXXXXXXXXXXXXXXXXXXXXXXXXAEAASLGLLPAGESGDAAGLSSGLTVDANEGEVVTTRFPVTPAEIASGSFAKPSRGKLRRSAGVEAAAGESTTPV 745
            MTVYMYTACITTMSKCKRWREALEVLDRMMAAAQEEGGGGELTPNVNTMSAXXXXXXXXXXXXXXXXXXXXXKTIGDEAGGLKPDXXXXXXXXXXXXXXXXXXXXXXXXDDLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPDVPVDVASFNXXXXXXXXXXXXXXXXXXXXEIT EGLAPGLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISMLRVGXXXXXXXXXXXXXXXXXXXXXXXXXRFLREMPQAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATS P SSPW              XXXXXXXXXXXXXXN EGPA SARSGRVPAA    XXXXXXXXXXXXXXXXXX     REAETG +FYCRPNVATFNAAMQAAGSAGEWREALTLLR MLAEKIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEADVGLE PSSSTTRTTSRPDVTTXXXXXXXXXXXXXXXXXXXXXXXXPTVGITPSGISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSGGGD VRXXXXXXXXXXXXXXXXXXXXXXXXXXAEAASLGLLPAGESGDAAGLSSGLTVDANEGEVVTTRFPVTPAEIASGSFAKPSRGKLRR AGVEAAAGESTTPV
Sbjct:   97 MTVYMYTACITTMSKCKRWREALEVLDRMMAAAQEEGGGGELTPNVNTMSAXXXXXXXXXXXXXXXXXXXXXKTIGDEAGGLKPDXXXXXXXXXXXXXXXXXXXXXXXXDDLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPDVPVDVASFNXXXXXXXXXXXXXXXXXXXXEITTEGLAPGLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISMLRVGXXXXXXXXXXXXXXXXXXXXXXXXXRFLREMPQAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSSPTSSPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVEGPAISARSGRVPAAAAPVXXXXXXXXXXXXXXXXXXXXXXXREAETGRFFYCRPNVATFNAAMQAAGSAGEWREALTLLRGMLAEKIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEADVGLEIPSSSTTRTTSRPDVTTXXXXXXXXXXXXXXXXXXXXXXXXPTVGITPSGISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSGGGDAVRXXXXXXXXXXXXXXXXXXXXXXXXXXAEAASLGLLPAGESGDAAGLSSGLTVDANEGEVVTTRFPVTPAEIASGSFAKPSRGKLRRPAGVEAAAGESTTPV 845
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0M4_ECTSI1.540e-12295.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 116..254
coord: 245..326
coord: 535..678
coord: 416..518
coord: 3..148
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 406..530
e-value: 3.5E-25
score: 91.0
coord: 531..689
e-value: 8.0E-36
score: 125.9
coord: 165..343
e-value: 1.7E-49
score: 170.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..77
e-value: 2.1E-14
score: 55.2
coord: 78..164
e-value: 1.1E-17
score: 66.0
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 560..620
e-value: 5.9E-9
score: 35.9
coord: 107..168
e-value: 7.8E-5
score: 22.7
coord: 417..466
e-value: 0.0014
score: 18.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 90..120
e-value: 7.7E-4
score: 17.5
coord: 609..636
e-value: 6.7E-4
score: 17.7
coord: 574..608
e-value: 9.3E-7
score: 26.7
coord: 265..299
e-value: 5.2E-8
score: 30.6
coord: 4..31
e-value: 0.0012
score: 16.9
coord: 300..327
e-value: 0.0011
score: 17.0
coord: 422..455
e-value: 1.8E-5
score: 22.6
coord: 159..190
e-value: 4.4E-4
score: 18.2
coord: 540..572
e-value: 4.7E-5
score: 21.3
coord: 493..519
e-value: 6.3E-6
score: 24.0
coord: 229..263
e-value: 8.8E-6
score: 23.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 492..517
e-value: 6.9E-5
score: 22.8
coord: 4..30
e-value: 0.019
score: 15.2
coord: 229..253
e-value: 9.9E-5
score: 22.3
coord: 48..76
e-value: 9.6E-4
score: 19.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 262..311
e-value: 1.5E-9
score: 37.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 607..641
score: 9.153
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 537..571
score: 11.213
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 191..225
score: 8.188
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 2..36
score: 8.188
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 646..680
score: 8.583
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 298..332
score: 10.676
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 45..79
score: 9.186
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 419..453
score: 10.194
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 226..262
score: 10.709
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 156..190
score: 10.819
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 572..606
score: 11.389
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 85..119
score: 9.219
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..297
score: 13.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 120..154
score: 8.594
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 454..488
score: 7.936
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..519
score: 9.186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:446105..450347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17824.1mRNA_Ecto-sp6_S_contig87.17824.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 444696..450347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17824.1 ID=prot_Ecto-sp6_S_contig87.17824.1|Name=mRNA_Ecto-sp6_S_contig87.17824.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=746bp
MTVYMYTACITTMSKCKRWREALEVLDRMMAAAQEEGGGGELTPNVNTMS
AVITACGRCGQGKAALEVLERMKTIGDEAGGLKPDLHCLSAAIDAAGGAG
EWEAALRVLDDLRAAGIKPDGFVYRAAITACGNGDKIEMALQLLRDMRED
PDVPVDVASFNAAITACGRCKQWQKAISLLREITAEGLAPGLVSYGAAIT
ACATCNQGDAAVELLRELPIVGITPDSMVYTSAISACGRAGQWERAVDLF
REISMLRVGFRPDAVSYSAVITALGEGGQWEEALRFLREMPQAGVKPDVV
CFNSAVTACAKSGRWEEAGGLLREMLQATSLPMSSPWWSSSGAPRTGEAR
GGAAAAAAAGAAQRRNAEGPARSARSGRVPAAAAPVSGRRRGSGGGGNSG
GGGSSREAETGHYFYCRPNVATFNAAMQAAGSAGEWREALTLLRSMLAEK
IAPNATSYTSAIAACGFAGEWEQALNLLRALKKGEGKLGVGAYNAAIKAC
GEAGRFEEAVGVLREMEADVGLETPSSSTTRTTSRPDVTTYTAAIAACGR
AGEYRRAVLLLREMPTVGITPSGISYNAAMTACGRSGQWELSLSLLREMA
KLGVSPDVVSYNSVMSALGDAGEWERAVGLLGEISGSGGGDVVRPDYVSF
ATVIRACEMAGRLDDAAGLRAEAASLGLLPAGESGDAAGLSSGLTVDANE
GEVVTTRFPVTPAEIASGSFAKPSRGKLRRSAGVEAAAGESTTPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat