prot_Ecto-sp6_S_contig87.17822.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17822.1
Unique Nameprot_Ecto-sp6_S_contig87.17822.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length958
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 1513 bits (3918), Expect = 0.000e+0
Identity = 908/956 (94.98%), Postives = 914/956 (95.61%), Query Frame = 0
Query:    1 MRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHQGXXXXXXXXXXXXXXXXXXXXXXXXXX-MFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALTQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSAAXXXXXXXXXXXXXXRQQQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXX------RGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVRLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGXXXXXXCNPSVPAAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVRDLEALRVPLESLRASIRAVFPRAVGEDLAALERLTAAAEADARRGAELLAEAAREWRGERAMGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQEKQQLRSAAAAAAGQGGVRSSKKVAGLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRRRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMTPLERLAQEGRGTEGLLAELAERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIKKKGRGGYLYVHVLLCGGVCGGGVRICLVVWHFYPDPLSNFEGCDRDGRHKSF 949
            MRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQH  XXXXXXXXXXXXXXXXXXXXXXXXXX MFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQAL QGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSA               RQQQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXX      RGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV LFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAG  XXXXCNPSVPAA GVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX VRDLEALRVPLESLRASIRAVFPRAVGEDLAAL RLTAAAEADAR GAELLAEAAREWRGERA+GADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQE+QQLRSA AAA GQGGVR SKKV  LIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVR RVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMTPLERLAQEGRGTEGLLAELAERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAK+LI++KGRGGYLYVHVLL GG CGGGVRICLVVWHFYP+PL N EGCDRDGRHKSF
Sbjct:  369 MRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALAQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSAG--------------RQQQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXRAVVRGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVVLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGSTXXXXCNPSVPAANGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRAVFPRAVGEDLAALARLTAAAEADARWGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQEQQQLRSATAAA-GQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMTPLERLAQEGRGTEGLLAELAERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKKLIREKGRGGYLYVHVLLGGGGCGGGVRICLVVWHFYPNPLLNLEGCDRDGRHKSF 1309          
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: A0A6H5J909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J909_9PHAE)

HSP 1 Score: 782 bits (2019), Expect = 2.610e-267
Identity = 510/738 (69.11%), Postives = 521/738 (70.60%), Query Frame = 0
Query:  348 MCFSIACGLPRDLGTG-SGXXXXXXPVAGXXXXXXCNPSVPAAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVRDLEALRVPLESLRASIRAVFPRAVGEDLAALE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLTAAAEADARRGAELLAEAAREWRGERAMGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQEKQQLRSAAAAAA--GQGGVRSSKKVAGLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRRRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMTPLERLAQEGRGTEGLLAELAERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIK 897
            MCFSIACGLPRDLGTG  GXXXXXXPVAG       NPSVP AYGVP+HTVRARALDAALMICKPPGFSSPGQPAGGGI   XXXX  VAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX VRDLEALRVPLESLRASIRAVFPRAVGEDLAAL                                                                                                                                                                                          RLTAAAEADARRGAELLAEAAREWRGERA+GADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXX +EAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQE+QQLRSA       GQGGVR SKKV  LIARCLSYKAPLLEEMLFGVLEEHDKKLL+SIRTPGVE+YLKRDPEDLFRHYMLSK+YPKAVHLMD EARVEA SGVHVR RVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLS+LKATM PLERLAQEGRGTEGL+AEL+ERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLI+
Sbjct:    1 MCFSIACGLPRDLGTGCGGXXXXXXPVAGSTGGGGYNPSVPTAYGVPNHTVRARALDAALMICKPPGFSSPGQPAGGGIGIGXXXX--VAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAAVPASGGLLGNXXXXXXXXXXGLVVAPGGYPTPETPQQRNQKALKREALEVHAAYRLVSRAAEAVRMAGVLARAAASSAVGGAAAVDNVPWSSLDGVPLWRLVTGGDEHRRASFLLADLVGATTKGNNNAESRRDYARELGSWCRGFFGAGDRQTFEGVELLRRAAASGXXXXXXXXRLTAAAEADARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXGLEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQERQQLRSAXXXXXXXGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLLSIRTPGVEQYLKRDPEDLFRHYMLSKDYPKAVHLMDREARVEAGSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSELKATMAPLERLAQEGRGTEGLIAELSERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIR 736          
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: A0A6H5J944_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J944_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 3.440e-87
Identity = 181/209 (86.60%), Postives = 185/209 (88.52%), Query Frame = 0
Query:  133 MREAVTEMGDSAAXXXXXXXXXXXXXXRQQQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXX-------RGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVR 334
            MREAVTE+GDSA+              RQQQAMGRVWAISERPVTL DNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXX       RGGRS SGAVVGGV+SRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLL R+HVEGVR
Sbjct:    1 MREAVTEIGDSASATDPTAGGGAGG--RQQQAMGRVWAISERPVTLVDNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXSRAVVRGGRSVSGAVVGGVLSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLVRDHVEGVR 207          
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.190e-17
Identity = 75/234 (32.05%), Postives = 107/234 (45.73%), Query Frame = 0
Query:  253 SRPVAPSPPL---VASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVRLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGXXXXXXCNPSVPAAYGVPS-HTVRARALDAALMICKPPGFSSP----GQPAGGGIXXXXXXXGGVAA---TAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVV 475
            +R   P+PPL    A     AG  G  N ++V   V + E+ +Q +  RR  L L+  G+    + RP+D LYDL++R+ + G+  FF  F  +QS AMCFSIACGLP DL   +       P            + P     P+   VR RA+  A  +   P  S P    G+    G+        G      TA   +   +F+ S  H GL L   R+LRP WF P+++
Sbjct:  536 ARAAPPAPPLSLAYADRDSGAGI-GPANQKEV---VPMNEMAMQLWLPRRTFLGLSNVGIHRFLKRRPIDYLYDLVSRDDIRGIGTFFQLFGKEQSCAMCFSIACGLPTDLVEAASAASVAFPTQNDSALALAAAASPGPSLNPTVERVRERAVLVAQQLGGNPSISPPLSSGGEATSTGMSVATPGTPGTPRHQPTAANTVFTPEFSYSDQHEGLVLLATRILRPLWFKPIIL 765          
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.230e-13
Identity = 108/334 (32.34%), Postives = 139/334 (41.62%), Query Frame = 0
Query:  256 VAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLL--ARNHVEGVRLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGXXXXXXCNPSVPAAYGVPSHTVRARALD-AALMICKPPGF-------SSPGQPAGGGIXXXXXXXGGVAATAGG----------------------------VIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------SVRDLEALRVPLESLRASIRAVFPRAVGEDLAALERL 540
            V P PPL   P    G+ GGL  R   G+V L EL  Q  + +R LLCL+GAGL ++ +LRP+D+L+ LL  A    + ++LFF+ +   ++ AMCF+IACGLP D                          + AA   P   +   A D AA  I    G        + P               GG A  AG                              +  E+F +SA + GL  F+ RLLRP WF PV V                XXXXXXXXXXXX           S  DLE +  PL  L A +R V+  AV ED  +  RL
Sbjct:  623 VPPPPPLCLPP---RGWLGGL--RGARGVVPLRELATQHAAPQRRLLCLSGAGLHMVAKLRPLDVLHRLLRAAPPRPDLLQLFFDSYGHAEACAMCFAIACGLPNDATAPPETLPPTDVRRRVTRWLLQQVKLSAASCPPERRLDRHARDRAATAIATGAGVLLAADERAGPSAATRAAAVDALQRLGGAAHFAGSGDXXXXXXXXXXXXXXXXXXXXXXXXXXAVFNEEFRHSAQYLGLAQFLARLLRPAWFRPVAVAAVPLQGAPAAQPRPQXXXXXXXXXXXXGTLPGDITLTLSEGDLEGMVEPLRELVALLRRVYRVAVQEDWLSKPRL 951          
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: A0A6A5C0M1_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C0M1_NAEFO)

HSP 1 Score: 60.1 bits (144), Expect = 2.450e-5
Identity = 49/188 (26.06%), Postives = 76/188 (40.43%), Query Frame = 0
Query:  287 LPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV-RLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGXXXXXXCNPSVPAAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPV 473
            L E+ VQ     RE +CL+ +G+ +L +LRPVD L  +L +   E + + F + +  D++ AMC  +AC  P                           S    Y +  H +  RA +        P F          +              GG +  +  ++SA HNGL L++ RLLRP W  P+
Sbjct:  489 LNEITVQHIKPPREFVCLSSSGMHLLIKLRPVDFLQQILQQTQPEELLKSFVSRYGEDETCAMCVMLACSPP--------------------PYNTITDSSQIVY-LDDHQLNRRAEETFFRFGGMPQFEIVSDTRRNFLFNNDIM--------GGPVSTQDISHSAKHNGLYLYLSRLLRPLWNSPL 647          
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: A0A4T0JI01_WALIC (Mitochondrial genome maintenance protein MGM101 n=3 Tax=Wallemia ichthyophaga TaxID=245174 RepID=A0A4T0JI01_WALIC)

HSP 1 Score: 59.3 bits (142), Expect = 4.370e-5
Identity = 58/194 (29.90%), Postives = 81/194 (41.75%), Query Frame = 0
Query:  285 VQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEG----VRLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGXXXXXXCNPSVPAAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSAL-----HNGLQLFIGRLLRPFW 469
            V + EL VQ     R  L LT  GL V+ + RPVD+L ++L  +        +  FFN+F  DQS AM  +IA G P  L  G         +A         P+ PA       T+ A    +A  +     +   G+P             G  A A  + +    TN+ +     HNGL L++ RLLRP W
Sbjct:  709 VAMSELTVQTAYLPRRFLVLTNMGLSVIAKQRPVDVLRNILESSSTSSRDQEIVSFFNNFGKDQSCAMALAIAAGNPIALSMGEDLYPAGSNIA-------TEPAPPA-------TLSADITQSARRLF----YDFGGRPVS--------IDRGYPAAATSMNLDALSTNTEILFSGRHNGLVLYLSRLLRPIW 876          
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Match: A0A4T0FIC1_9BASI (Mitochondrial genome maintenance protein MGM101 n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FIC1_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 5.850e-5
Identity = 58/194 (29.90%), Postives = 80/194 (41.24%), Query Frame = 0
Query:  285 VQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEG----VRLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXPVAGXXXXXXCNPSVPAAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSAL-----HNGLQLFIGRLLRPFW 469
            V + EL VQ     R  L LT  GL V+ + RPVD+L ++L  +        +  FFN+F  DQS AM  +IA G P  L  G          A         P+ PA       T+ A    +A  +     +   G+P             G  A A  + +    TN+ +     HNGL L++ RLLRP W
Sbjct:  915 VAMSELTVQTAYLPRRFLVLTNMGLSVIAKQRPVDILRNILESSSTSSRDQEIVSFFNNFGKDQSCAMALAIAAGNPVALSMGEDLYPAGSNTA-------TEPTPPA-------TLSADITQSARRLF----YDFGGKPVS--------IDRGYPAAATSMNLDSLTTNTEILFSGRHNGLVLYLSRLLRPIW 1082          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G0M6_ECTSI0.000e+094.98Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A6H5J909_9PHAE2.610e-26769.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J944_9PHAE3.440e-8786.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9YE90_9STRA6.190e-1732.05Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835YRU3_9STRA7.230e-1332.34Nup133 N terminal like-domain-containing protein n... [more]
A0A6A5C0M1_NAEFO2.450e-526.06Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A4T0JI01_WALIC4.370e-529.90Mitochondrial genome maintenance protein MGM101 n=... [more]
A0A4T0FIC1_9BASI5.850e-529.90Mitochondrial genome maintenance protein MGM101 n=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1780coord: 298..371
e-value: 3.0E-5
score: 25.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 931..957
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 903..930
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..902
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 536..894
coord: 2..487

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:415085..426788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17822.1mRNA_Ecto-sp6_S_contig87.17822.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 414634..429872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17822.1 ID=prot_Ecto-sp6_S_contig87.17822.1|Name=mRNA_Ecto-sp6_S_contig87.17822.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=958bp
MRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHQGGVGAAPVPA
DGGGGTATAQQQQQQQQMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQ
ALTQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSAAAAAVS
TAGGAGAGGRQQQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPS
DNNGTTAANGGGGGGGGGGSRAVVRGGRSTSGAVVGGVVSRAKAWQRSSR
YASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRE
LLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVRLFFNDFSPDQSAAMCF
SIACGLPRDLGTGSGGGGGGGPVAGSAGGGGCNPSVPAAYGVPSHTVRAR
ALDAALMICKPPGFSSPGQPAGGGIGIGIGIGGGVAATAGGVIMGEKFTN
SALHNGLQLFIGRLLRPFWFLPVVVAPPGGGGGGAKRSADGTVKSGGSPP
PPPSVRDLEALRVPLESLRASIRAVFPRAVGEDLAALERLTAAAEADARR
GAELLAEAAREWRGERAMGADGQLARACAALTAVGRLEAVVDVCMTCAKN
FGEGVVASGGGGQGGGGGVEAWEEGVYQGGGIVGAEQREKARLECYKRVL
EAVVGLLKQEKQQLRSAAAAAAGQGGVRSSKKVAGLIARCLSYKAPLLEE
MLFGVLEEHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLM
DCEARVEARSGVHVRRRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKL
RTMEDERDVLLVQERLLSDLKATMTPLERLAQEGRGTEGLLAELAERRRI
AETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIKKKG
RGGYLYVHVLLCGGVCGGGVRICLVVWHFYPDPLSNFEGCDRDGRHKSFS
SGPTTAG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004870Nucleoporin_Nup155