prot_Ecto-sp6_S_contig87.17821.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17821.1
Unique Nameprot_Ecto-sp6_S_contig87.17821.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length309
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 615 bits (1587), Expect = 7.950e-207
Identity = 307/308 (99.68%), Postives = 308/308 (100.00%), Query Frame = 0
Query:    1 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQK 308
            MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLV+VVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQK
Sbjct:    1 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVEVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQK 308          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA)

HSP 1 Score: 188 bits (477), Expect = 5.640e-50
Identity = 126/340 (37.06%), Postives = 173/340 (50.88%), Query Frame = 0
Query:   12 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY--HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSV--AYGFWYSVFSVGSPVPSRQC---------------------SRLAHKSSSGGPGPVNSMFALLGLRRAERV---------------------LVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNST 305
            F  L +A+  ++ +L +DE                 +  YFC+P+T   L   ++ +S   LP  L   + R++  TFMGLLPE++HAW++VDN L LWNY        +F+ELEQVIV V L  P++GVF   V+++L VAT VEV+L+AVT            + R+ VR T F AS+DGV+M  I  HP GR+FMAGKDGNLYEL Y    A G W S   +G    SR+C                     SR A  ++   PGP+  +     ++R  RV                     L+D+ VDPLRN LYT+D  G +  ++LG DG  T
Sbjct:   15 FSALADAHGEVVSHLLQDEAQNTTLYSQLLDNPGGAAHGYFCEPHTADQLGLPLELRSTIPLPAELLDLQQRMQVATFMGLLPELNHAWLSVDNALLLWNYVDGADVVKKFQELEQVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVT---------DGGDGRLDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEAGGATG-WLSYVGLGGSSGSRKCRKINRSTTPSSAVWNSFKQGRSRAARGAAITSPGPMAGLL----VKRLPRVTAARAXXXXXXXXXXXAGAASLLDLAVDPLRNALYTVDSTGVLRHYNLGPDGQQT 340          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.570e-45
Identity = 104/265 (39.25%), Postives = 163/265 (61.51%), Query Frame = 0
Query:   52 FCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ------DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETG---SPR--NRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFA--LLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGN 303
            F +PY +++    +  +    +P AL+ +   ++CM+FMGLLPEI  AW+++DN L+LWNY         DF +F  L+Q+IV+VALVPP+ GVF ++V+++LAVAT VE++LLAV + E+P+ TG    P   N  + +R T+F  S+D V+M+K+    +GR+FM G DG+LYE  Y+    F   +  +G  +  R+C +L H +S     P++S+    L  L    + LVDVVVD +R +LY L     ++ +DLG +G+
Sbjct:   11 FPEPYQSTW-GGAVHYEGVTAVPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAF-EEPEGTGVLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEFALGL-GLGFGMAGRKCRKLNHSAS-----PLSSLVPGFLKQLSAPSKPLVDVVVDDVRQILYALREDNSLEGYDLGVNGD 267          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: L8HDY8_ACACA (Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA)

HSP 1 Score: 167 bits (422), Expect = 1.200e-42
Identity = 91/240 (37.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query:   63 PQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADG 302
            PQ +      LPE L +    +EC  F+GL PEI+ AW+TVDN L LWNY ++++  + + +Q+IV+V L+PPK+ VF+++V++VL +AT VE++LLAV +     E  +P+   I +  T    S D V+M+KI     GR+FM G DG+LYEL Y    G W+S          ++  ++ H            M AL     A+  ++D+V+D  RN+LYTL   G ++++DLG DG
Sbjct:   86 PQFRLLKMIPLPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQIIVSVGLIPPKRDVFSEDVKYVLVLATPVEIVLLAVWF-----EDNTPQGE-IHLEPTRIALSADNVNMVKIVGTKRGRIFMGGSDGSLYELEYQADEG-WFS----------KRARKINHTRGI--------MSALTSYWSAKPAIIDIVIDESRNILYTLSARGAIEVYDLGTDG 300          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: A0A7S3M7K2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA)

HSP 1 Score: 162 bits (411), Expect = 3.570e-41
Identity = 103/313 (32.91%), Postives = 157/313 (50.16%), Query Frame = 0
Query:   12 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRE------------------LEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTT 306
            F +L  A+  L   LR DE + ++  Q +       S  Y+ +PY   +  P ++  SF  LP+ +  +  ++EC +FMG LPE+   W+TVDN L+LW Y +   T F                    + +VIV+VAL  PK GVF   V++VL VA+ VEV+LLAVT  E+            ++  T +   +D V+M+K+    +GR+FMAG DGN+YEL YS +   W ++   G      +C ++ H + +     +   F L      E  LVD+ VD +R V+Y +   G +  F LG+ G  TT
Sbjct:    3 FKILEKASETLQDKLRLDESALDIADQFSFRPDMHGSHRYYTEPYKTQW-GPLLEYGSFTALPKRILDQYTKIECASFMGTLPELGRVWVTVDNKLFLWKYTSAPSTSFPNEVAEDVDAISEDCEVYDGISEVIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTCDEQGNN--------FKLVPTAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYSNSESVWSALVDAGGEHSRHKCRKINHFAWNWRLVHILPPF-LKSFAGEEDSLVDLAVDNVRQVVYAITAKGVLSAFYLGSTGTETT 305          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: A0A7S1C2I9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2I9_9STRA)

HSP 1 Score: 150 bits (378), Expect = 8.580e-39
Identity = 104/269 (38.66%), Postives = 146/269 (54.28%), Query Frame = 0
Query:   46 STSQAYFCDPYTNSYL-APQIQ-PKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY-HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLG--LRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKA 309
            STS+ Y+  PY    + APQ+  P     LP AL+R+   V     MGLLPEI  A++T DN LYLW++ H +DFT +  L+QVI++V LV P   V    +E++L VATTVEV+LL V++  +        + R+ +        TD VSML +A    GR+FMAG DG LYELTY    G W  +          +C +  H ++  G        AL+G  L    + L+ V VD  RN++YTL   G ++L+DLG DG    ++A
Sbjct:   52 STSRNYWASPYLRGGVWAPQVVIPSDMHPLPAALARKHAEVHAT--MGLLPEISRAYVTFDNKLYLWHFDHAEDFTAYERLDQVILSVGLVMPTP-VVQGYIEYLLVVATTVEVVLLGVSFEREDDP-----HSRMTLTPLRLTFPTDNVSMLAVAGTSAGRIFMAGGDGCLYELTYEDDRGGWRDMLGWSRGA---KCRKFNHTTTHIG----RVARALVGSLLANPGQPLIAVEVDHYRNLMYTLAQDGTIELYDLGEDGADLVRRA 305          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: I2CP24_NANGC (Nuclear pore complex protein Nup155 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP24_NANGC)

HSP 1 Score: 153 bits (386), Expect = 2.420e-38
Identity = 101/296 (34.12%), Postives = 152/296 (51.35%), Query Frame = 0
Query:   16 RNANTVLLHNLRRDELSPELQKQLTAT---GMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQ-DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAE-RVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTT 306
            R A    +    R E  PE  +   A+   G  S    ++  P+ +    P ++ +S    P A+ R    ++ M+F GL  EI  AW+TVDN+LY+W+YHT+       +L+Q+IV V LV P   VF   V H+L   T   V L A+ +     E G+P +  +QVRRTNFR STDGV M K+     GR+F+AG+DG++YE+ YS     ++          S +C +L   S   GP  +     L  L +     +VD+VVDP R++LY+L     + ++DLG   ++ T
Sbjct:   42 RQAVLATIEEKMRKEGKPEDSRMNYASMSGGGVSGDMPFYIHPWKDPAFGPPVEYQSLRPFPPAILRTYSLLQAMSFQGLWTEIHRAWITVDNLLYIWDYHTEASHAIVDDLDQLIVAVGLVRPNPEVFKDTVTHLLVACTPSAVELFALCF-----EDGTP-DSALQVRRTNFRVSTDGVVMRKVVGTRTGRIFLAGQDGSVYEIQYSNEKDLYF--------YSSNKCRKLNRTS---GPASLAVSAVLRHLWKTNVSEIVDLVVDPTRSILYSLSADNLIQVYDLGEKDDACT 320          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: A0A433PJF9_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PJF9_9FUNG)

HSP 1 Score: 149 bits (375), Expect = 2.110e-36
Identity = 105/308 (34.09%), Postives = 153/308 (49.68%), Query Frame = 0
Query:   15 LRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHT-QDFTQFRELEQVIVTVALVPPKKG-----------VFNKEVEHVLAVATTVEVILLAV---------TYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGAD 301
            L+NA   L   L RD+  PEL   L    M+  S + +  P   S+    IQ K    LP+AL  + D ++C  FMGL PEI+ AW+TVD+ L+LWNY    DF  F + +QVIV+V LV P+ G           +F  ++E++L +AT +E+ILL +         T +   + TG      + +  T     +D VSM  I    NGR+FM G DG+LYEL Y    G W++          R+C +L H S+     P + +         E  +  + +D  RNVLYTL    ++++  LGAD
Sbjct:   88 LKNAAKTLDVQLTRDQKQPELADVL----MSIQSSSEYDQPTNPSW--QMIQRKRIITLPDALFEQYDLLQCRCFMGLFPEINRAWITVDHRLFLWNYQDGSDFYSFEDQDQVIVSVGLVKPRLGLYLSFDSSVKRIFIDQIEYLLVLATPIEIILLGMSLNGVANVGTSNSYARPTGE-----LTLYVTQMSVPSDNVSMTSIVGTDNGRIFMCGNDGHLYELIYQAEEG-WFT----------RKCRKLNHTST-----PYSHLMPTFLKLTQEDPIAAIALDDSRNVLYTLSHKSNIEVIYLGAD 368          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: A0A7S3A661_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A661_9RHOD)

HSP 1 Score: 144 bits (363), Expect = 2.720e-36
Identity = 90/230 (39.13%), Postives = 133/230 (57.83%), Query Frame = 0
Query:   73 LPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHT-QDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGG---PGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDL 298
            LP+AL  +   +EC +FMG+ PEI  AW TVDN L+LWNY T  DF  F  ++Q+I + A+V P+ GVF ++V+++LAV+TTVEV+LL V +      +G      I +  T     TD V+MLK+      R+FMAG+DG L+ELTY    G   S +S+GS    R+  +L H  S+     P  V   F+       +  L+D+ VD  R++L+ L   G+V ++D+
Sbjct:   47 LPKALFEQYSHLECKSFMGIFPEIHRAWFTVDNRLFLWNYATGSDFYPFEGIDQIITSAAIVEPRPGVFVEDVKYLLAVSTTVEVMLLGVCF------SGPSVTSEITLVPTQISVITDNVAMLKLVGSRGRRLFMAGRDGCLHELTYQ---GETNSFWSLGS----RKARKLNHSKSAFSSLIPSSVRLFFS------GDDPLIDLAVDDNRDLLFALSEYGNVTVYDI 257          
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Match: A0A261XXE4_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XXE4_9FUNG)

HSP 1 Score: 148 bits (373), Expect = 3.740e-36
Identity = 98/294 (33.33%), Postives = 149/294 (50.68%), Query Frame = 0
Query:   15 LRNANTVLLHNLRRDELSPELQKQLTAT------GMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNY-HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGAD 301
            LRNA   +   L +++  PEL   L  T      G +S S+  +          P    +    LP A+ ++ D ++C +FMGLLPEI+ AW+TVDN L+LWNY    DF  F + +Q+IV+V LVPPK+ VF   +E+VL +ATT+E+ILL V+  +      S R +++ +  T     +D VSM  I    +GR+FM G DG+LYE+TY  A  F+      GS    R  ++          G + +         A   + D+ VD  R +LY L     + +++L  +
Sbjct:   16 LRNAAKTVDEQLTQEQKYPELLDLLANTAPGAGVGGSSASEQQW----------PVFLKQRAVTLPNAIVQQYDILQCRSFMGLLPEINRAWITVDNKLFLWNYIDGTDFYSFEDQDQIIVSVGLVPPKRDVFVDGIEYVLVIATTLEIILLGVSTTDPSGAPSSYRGQKLSLFVTQLSVPSDDVSMTNIVGTADGRIFMCGDDGHLYEVTYKAAETFF------GSRCQKRNLTQ----------GALYNFIPSFFNFTAHDKVTDITVDDQRKLLYALTAKSSIRVYNLATE 283          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M6_ECTSI7.950e-20799.68Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A835YRU3_9STRA5.640e-5037.06Nup133 N terminal like-domain-containing protein n... [more]
A0A7R9YE90_9STRA4.570e-4539.25Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
L8HDY8_ACACA1.200e-4237.92Nucleoporin, putative n=1 Tax=Acanthamoeba castell... [more]
A0A7S3M7K2_9STRA3.570e-4132.91Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S1C2I9_9STRA8.580e-3938.66Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
I2CP24_NANGC2.420e-3834.12Nuclear pore complex protein Nup155 (Fragment) n=1... [more]
A0A433PJF9_9FUNG2.110e-3634.09Nucleoporin-domain-containing protein n=1 Tax=Endo... [more]
A0A7S3A661_9RHOD2.720e-3639.13Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A261XXE4_9FUNG3.740e-3633.33Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 66..306
e-value: 6.7E-45
score: 153.6
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 33..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:410049..413763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17821.1mRNA_Ecto-sp6_S_contig87.17821.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 410049..413763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17821.1 ID=prot_Ecto-sp6_S_contig87.17821.1|Name=mRNA_Ecto-sp6_S_contig87.17821.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=309bp
MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQA
YFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAW
MTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAV
ATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAH
PNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSS
GGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGA
DGNSTTQKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014908Nucleoporin_Nup133/Nup155_N
IPR004870Nucleoporin_Nup155