prot_Ecto-sp6_S_contig87.17818.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17818.1
Unique Nameprot_Ecto-sp6_S_contig87.17818.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length991
Homology
BLAST of mRNA_Ecto-sp6_S_contig87.17818.1 vs. uniprot
Match: D7G0M9_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M9_ECTSI)

HSP 1 Score: 1054 bits (2725), Expect = 0.000e+0
Identity = 813/867 (93.77%), Postives = 818/867 (94.35%), Query Frame = 0
Query:    1 MFERLSVHLTRNKVCGSTPAGRAQLEAFAALRKRSTAAGRPAVARGDFPPVGGIAAAVVGSRRPKAGGVKDSGAKEGPAGSERKGSRRTSESLWPCPVCTKSFRRISTHVQMSDCKIVLQWGTGATMECRNCGEVVDVVPDVLQQHSKRCRPRDKITNDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGSFIAGRALGSDDSDSDPGGTEGGLGRAGSWSGAGGLLAGGGGIIGVMRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXXXXAEVGEVEDRYPCLASRAEESALVTVREVRRAEALPEGAAGTAPGEQQ--HRRQAVVACRLVAEGGIERKKGEAGVAATLGFQVTDDRAPGVTNAWAGFPVAAAVVAEGVADSAGVGAGASILKVEDSSMRGRSASDVTKAMYAALLKRTGKHGKSAAATVRLVIVTPPWSASAXXXXXXXXDNKAEASAPASPYDGVGGMACLGREGHEGREFVEICWSVLMAPGGGVLPPTDVGLPASRAGERPAEQDAEVAQRLGFDVERRELSQWMECIEVSSVTPDGVAARHGLQPKDLLLAVDGNHLLSTTEASFWLAVGRTLRACDSASQTKKFSSKAATTNDNDNEDAFERLSADHGDDSDWLRFLVFRKCAXXXXXXXXXXXXX-LASAGRAKRPVGRPKGSMESKKGALAGGAGRGATGQKEEASRGLLPRQRSRELPGAPA 864
            MFERLS HLTRNKVCGSTPAGRAQLEAFAALRKRSTAAGRPAVARGDFPPVGGIAAAVVGSRRPKAGGV+DSGAKEGPAGSE KGSRR SESLWPCPVCTKSFRRISTHVQMSDCKIVLQWG GATMECRNCGEVVDVVPDVLQQHSKRCRPRDKITNDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SFIAGRALGSDDSDSDPGGT+GGLGRAGSWSG            GVMRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXX  AEV EVEDRYPCLASRAEESALVTVREVRRAEALPEGAAGTAPGEQQ  HRRQAVV CRLVAEGGIERKKGEAGVAATLGFQVTDDRAPGVTNAWAGFPVAAAVVAEGVADSAGVG GASILKVEDSSMRGRSASDVTKAMYAALLKRTGKHGKSAA TVRLVIVTPPWSASA        DNKA A APASPYDGVGGMACLGRE HEGREFVE+CWSVLMAPGGGVLPPTDVGLPASRAGERPAEQDAEVA+RLGFDVERRELSQWMECIEVSSVTPDGVAARHGLQPKDLLLAVDGNHLLSTTEASFWL VGRTLRACDSASQT K   KAATTND+DNEDAFERLSADHGDDSDWLRFLVFRKCAXXXXXXXXXXXXX LASAGRAKRPVGRPKGSMESKKGALAGGAGRGATGQKEEASRGLLPRQRSRELPGA A
Sbjct:    1 MFERLSAHLTRNKVCGSTPAGRAQLEAFAALRKRSTAAGRPAVARGDFPPVGGIAAAVVGSRRPKAGGVRDSGAKEGPAGSEGKGSRRRSESLWPCPVCTKSFRRISTHVQMSDCKIVLQWGAGATMECRNCGEVVDVVPDVLQQHSKRCRPRDKITNDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SFIAGRALGSDDSDSDPGGTDGGLGRAGSWSGXXXXXXXXXXXXGVMRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXXEAAEVCEVEDRYPCLASRAEESALVTVREVRRAEALPEGAAGTAPGEQQQQHRRQAVVVCRLVAEGGIERKKGEAGVAATLGFQVTDDRAPGVTNAWAGFPVAAAVVAEGVADSAGVGTGASILKVEDSSMRGRSASDVTKAMYAALLKRTGKHGKSAA-TVRLVIVTPPWSASAPTPGGGGVDNKAGAFAPASPYDGVGGMACLGRERHEGREFVELCWSVLMAPGGGVLPPTDVGLPASRAGERPAEQDAEVARRLGFDVERRELSQWMECIEVSSVTPDGVAARHGLQPKDLLLAVDGNHLLSTTEASFWLEVGRTLRACDSASQTNKSGGKAATTNDSDNEDAFERLSADHGDDSDWLRFLVFRKCAXXXXXXXXXXXXXXLASAGRAKRPVGRPKGSMESKKGALAGGAGRGATGQKEEASRGLLPRQRSRELPGAAA 859          
BLAST of mRNA_Ecto-sp6_S_contig87.17818.1 vs. uniprot
Match: A0A6H5JEX0_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX0_9PHAE)

HSP 1 Score: 899 bits (2324), Expect = 2.890e-310
Identity = 728/892 (81.61%), Postives = 743/892 (83.30%), Query Frame = 0
Query:    1 MFERLSVHLTRNKVCGSTPAGRAQLEAFAALRKRSTAAGRPAVARGDFPPVGGIAAAVVGSRRPKAGGVKDSGAKEGPAGSERKGSRRTSESLWPCPVCTKSFRRISTHVQMSDCKIVLQWGTGATMECRNCGEVVDVVPDVLQQHSKRCRPRDKITNDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------GGGSFIAGRALGSDDSDSDPGGTEGGLGRAGSWSGAGGLLAGGGGIIGVMRRPLPPKKRWETAFEAWAGXXXXXXXXXXXXXXXXXXXXXXAEVGEVEDRYPCLASRAEESALVTVREVRRAEALPEGAAGTAPGEQQHRRQAVV--ACRLVAEGGIERKKGEAGVAATLGFQVTDDRAPGVTNAWAGFPVAAAVVAEGVADSAGVGAGASILKVEDSSMRGRSASDVTKAMYAALLKRTGKHGKSAAATVRLVIVTPPWSASAXXXXXXXXDNKAEASAPASPYDGVGGMACLGREGHEGREFVEICWSVLMAPGGGVLPPTDVGLPASRAGERPAEQDAEVAQRLGFDVERRELSQWMECIEVSSVTPDGVAARHGLQPKDLLLAVDGNHLLSTTEASFWLAVGRTLRACDSASQTKKFSSKAATT----------NDNDNEDAFERLSADHGDDSDWLRFLVFRKCAXXXXXXXXXXXXX-------LASAGRAKRPVGRPKGSMESKKGALAGGAGRGATGQKEEASRGLLPRQRSRELPGAPA 864
            MFERLS HL RN VCGSTPAGRAQL+AFAALRKRSTAAGRPAVARGDFPPVGGIAAAVVGSRRPKAGGV+DSGAKEGPAGSE KGSRRTSESLWPCPVCTKSFRRISTHVQMSDCKIVLQW  GATMECRNCGEVVDVVPDVLQQHSKRCRPRDK T+   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   GGGSFIAGRALGSDDSDSDP G +GGLGRAGSW GAGGL AGGGGIIG MRRPLPPKKRWETAFEAWAG                      A+  EVEDRYPCLA RAEESALVTVREVRRAEAL EG AGTA               CRLV EGGIE               VTDDRAPGV NAWAGFPVAAAVVA GVADSAGVGAGASILKVE+SSMRGRSA++VTKAM+AALLKRTGKH KSAA TVRLVIVTPPW ASA        DNKA ASAPAS YDGVGGMACLGREGHEGREFVE+CWSV MA GGGVLPPTD   PASRAGERPAEQDAEVA+RLGFDVERRELSQWMECIEVSS+TPDGVAARHGLQPKDLLLAVDGNHLLSTTEASFWL VGRTLRACD+A QTKK  SKA+TT               +DAFERLSA H DDSDWLRFLVFRKCAXXXXXXXXXXXXX       LA AGRAKRPVGRP GSMESKKG LAGGAGRG TGQKEE SRGLLP Q SRELP A A
Sbjct:  153 MFERLSAHLARNNVCGSTPAGRAQLDAFAALRKRSTAAGRPAVARGDFPPVGGIAAAVVGSRRPKAGGVRDSGAKEGPAGSEGKGSRRTSESLWPCPVCTKSFRRISTHVQMSDCKIVLQWEAGATMECRNCGEVVDVVPDVLQQHSKRCRPRDKSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSNLLDHRRQPLPLVDANSGGGSFIAGRALGSDDSDSDPEGPDGGLGRAGSWCGAGGLPAGGGGIIGAMRRPLPPKKRWETAFEAWAGGGEKNKGCVALPQPAAVAAAEAAK--EVEDRYPCLAGRAEESALVTVREVRRAEALLEGGAGTAXXXXXXXXXXXXXXVCRLVVEGGIE---------------VTDDRAPGVANAWAGFPVAAAVVAGGVADSAGVGAGASILKVEESSMRGRSAAEVTKAMFAALLKRTGKHAKSAA-TVRLVIVTPPWLASAPPPGGGV-DNKAGASAPASSYDGVGGMACLGREGHEGREFVELCWSVFMASGGGVLPPTDRDSPASRAGERPAEQDAEVARRLGFDVERRELSQWMECIEVSSITPDGVAARHGLQPKDLLLAVDGNHLLSTTEASFWLEVGRTLRACDTAFQTKKGGSKASTTAXXXXXXXXXXXXXGQDAFERLSAGHDDDSDWLRFLVFRKCAXXXXXXXXXXXXXXXXXXXXLAIAGRAKRPVGRPMGSMESKKGVLAGGAGRGVTGQKEEVSRGLLPWQLSRELPEAAA 1025          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0M9_ECTSI0.000e+093.77PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JEX0_9PHAE2.890e-31081.61PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 678..748
e-value: 0.093
score: 21.9
coord: 501..574
e-value: 6.4
score: 5.0
IPR001478PDZ domainPROSITEPS50106PDZcoord: 657..726
score: 9.391
NoneNo IPR availableGENE3D2.30.42.10coord: 673..749
e-value: 1.3E-7
score: 33.7
IPR041489PDZ domain 6PFAMPF17820PDZ_6coord: 698..737
e-value: 1.7E-6
score: 27.8
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 679..731

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:381500..390638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17818.1mRNA_Ecto-sp6_S_contig87.17818.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 381500..390638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17818.1 ID=prot_Ecto-sp6_S_contig87.17818.1|Name=mRNA_Ecto-sp6_S_contig87.17818.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=991bp
MFERLSVHLTRNKVCGSTPAGRAQLEAFAALRKRSTAAGRPAVARGDFPP
VGGIAAAVVGSRRPKAGGVKDSGAKEGPAGSERKGSRRTSESLWPCPVCT
KSFRRISTHVQMSDCKIVLQWGTGATMECRNCGEVVDVVPDVLQQHSKRC
RPRDKITNDEAAAAPAAAAAGDAAVTPSESLSTSPPPLLLAQAPTLGGAV
PSSSQQLTRSASLTSSTASGPAAAAPPKGGAGGGATGRSRVGGGSSNGTG
KRRGFPQNGGGGGRASPSTSEGGGGGGGGGGESAPPRLKRRVSTASAASS
GSGQSGVMRRGSTTSSTSNLLDHRRQPPPLLDANSGGGSFIAGRALGSDD
SDSDPGGTEGGLGRAGSWSGAGGLLAGGGGIIGVMRRPLPPKKRWETAFE
AWAGGGEKNNGGGAPPQATAAAAAAAAEVGEVEDRYPCLASRAEESALVT
VREVRRAEALPEGAAGTAPGEQQHRRQAVVACRLVAEGGIERKKGEAGVA
ATLGFQVTDDRAPGVTNAWAGFPVAAAVVAEGVADSAGVGAGASILKVED
SSMRGRSASDVTKAMYAALLKRTGKHGKSAAATVRLVIVTPPWSASAPAS
GGGGGDNKAEASAPASPYDGVGGMACLGREGHEGREFVEICWSVLMAPGG
GVLPPTDVGLPASRAGERPAEQDAEVAQRLGFDVERRELSQWMECIEVSS
VTPDGVAARHGLQPKDLLLAVDGNHLLSTTEASFWLAVGRTLRACDSASQ
TKKFSSKAATTNDNDNEDAFERLSADHGDDSDWLRFLVFRKCAAAAAPPP
PPPPPPLASAGRAKRPVGRPKGSMESKKGALAGGAGRGATGQKEEASRGL
LPRQRSRELPGAPAPAGAEGAAGVRVRVRNSSSSSTRKCGWSGTRSGRGW
RYDGGRRGGSRNKGARTGRCSPFGPRTRCLEPRQERPFQPALSSWRILCS
GTSSPSPRGRSCCRWMGFLRDTLTSRPRETWRSRPGLSPC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR041489PDZ_6
IPR036034PDZ_sf