prot_Ecto-sp6_S_contig87.17804.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17804.1
Unique Nameprot_Ecto-sp6_S_contig87.17804.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length504
Homology
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BLAST of mRNA_Ecto-sp6_S_contig87.17804.1 vs. uniprot
Match: D7FZB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB8_ECTSI)

HSP 1 Score: 904 bits (2337), Expect = 0.000e+0
Identity = 471/505 (93.27%), Postives = 477/505 (94.46%), Query Frame = 0 
Query:    1 MIWVKSTTNQPCTRSRSPNLPAKFLNIARGMLLLDNPKILQETSWPPAGGRGAGQSRRGSIATVGSTAKGSEQNIGKGVPAEANPAVAGNEERKNAVAPEQGVHPDNRNSGRFKDQDEEEKKHEAARTLELERGALRDWATKRRRSGAMKIAEVGLKALRSKCLKTTVQFRDHVLTHLRSVKDPSKVCRNLGVVASALIGELELMGERSAETESETNTGDHNNDSSSVTTMRSASGRDDGRADGDGTMVQGDSNVSGSTFGTRGVG--QGRNVTTHRQRQKGAVGVGANSKAPGIGERCDGVRHELEGLDDILDDMDGGNSPTAARGVDVVTETKRTAMEEVQGATIKGRTASFGTKYHTKQDILNEMNRTPGYRDLVLEEDVFAAIKQLLSWTPPPKWERSRDRHKAQLIAAAGVILKKALILDGPPGFWPLPLEGPSGDRVQRWKMSAAVVPVLIFRXXXXXXXXXXXXAHSGGRTRHGVWSFGASGFRYASKPPVLPAARIP 503
            MIWVKSTTNQPCTRSRSPNLPAKFLNIARG+LLLDNPKILQETSWPPAGGRGAGQSRRGSIATVGSTAKGSEQNIG+GVPAEANPA AGNE RKNAVAP+QGV PDNRNSGRFKDQDEEE KHEAARTLELERG LRDWATKRRRSGAMKIAEVGLKALR KCLKTTVQFRDHVLTHLRSVKDPSKVCRNLGVVASALIGELELMGERSAETESETNTGD+NNDSSSVTTMRSA GRDDGRADGDGTMVQGDSNVSGSTFGT GVG  QGRNV THRQRQKGAVGVGANSKAPGIGERCDGVRHELEGLDDILDDMDGGNSPTAARG+D+VTETKRTAMEEVQGATIK RTASFGTKYHTKQDILNEMNRTPGYRDLVLEEDVFAAIKQLLSWTPPPKWERSRDRHKAQLIAAAGVILKKALILDGPPGFWPLPLEGPS DRVQRWKMS AVVPVLIFR            A SGG TRHGVWSFGASGFRYASKPPVLPAARIP
Sbjct:    1 MIWVKSTTNQPCTRSRSPNLPAKFLNIARGLLLLDNPKILQETSWPPAGGRGAGQSRRGSIATVGSTAKGSEQNIGEGVPAEANPAEAGNEGRKNAVAPKQGVDPDNRNSGRFKDQDEEEMKHEAARTLELERGVLRDWATKRRRSGAMKIAEVGLKALRFKCLKTTVQFRDHVLTHLRSVKDPSKVCRNLGVVASALIGELELMGERSAETESETNTGDYNNDSSSVTTMRSAFGRDDGRADGDGTMVQGDSNVSGSTFGTHGVGGRQGRNVKTHRQRQKGAVGVGANSKAPGIGERCDGVRHELEGLDDILDDMDGGNSPTAARGLDIVTETKRTAMEEVQGATIKSRTASFGTKYHTKQDILNEMNRTPGYRDLVLEEDVFAAIKQLLSWTPPPKWERSRDRHKAQLIAAAGVILKKALILDGPPGFWPLPLEGPSRDRVQRWKMSEAVVPVLIFRRKKSHRKAAGGGARSGGMTRHGVWSFGASGFRYASKPPVLPAARIP 505
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BLAST of mRNA_Ecto-sp6_S_contig87.17804.1 vs. uniprot
Match: A0A6H5JDS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS4_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.850e-32
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0 
Query:   31 MLLLDNPKILQETSWPPAGGRGAGQSRRGSIATVGSTAKGSEQNIGKGVPAEANPAVAGNEERKNAVAPEQGVHPDNRNSGRFKDQ 116
            MLLLD+PKILQE+S  PAGG+GAGQSRRGS+ATV STAK  EQNIGKGVPAEANPAVAG++ RKNAVAPEQG  PDNRNSGRFK+Q
Sbjct:    1 MLLLDDPKILQESSGSPAGGQGAGQSRRGSMATVSSTAKELEQNIGKGVPAEANPAVAGSDGRKNAVAPEQGADPDNRNSGRFKEQ 86
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZB8_ECTSI0.000e+093.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDS4_9PHAE1.850e-3282.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:297910..306234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17804.1mRNA_Ecto-sp6_S_contig87.17804.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 297910..306234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17804.1 ID=prot_Ecto-sp6_S_contig87.17804.1|Name=mRNA_Ecto-sp6_S_contig87.17804.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=504bp
MIWVKSTTNQPCTRSRSPNLPAKFLNIARGMLLLDNPKILQETSWPPAGG
RGAGQSRRGSIATVGSTAKGSEQNIGKGVPAEANPAVAGNEERKNAVAPE
QGVHPDNRNSGRFKDQDEEEKKHEAARTLELERGALRDWATKRRRSGAMK
IAEVGLKALRSKCLKTTVQFRDHVLTHLRSVKDPSKVCRNLGVVASALIG
ELELMGERSAETESETNTGDHNNDSSSVTTMRSASGRDDGRADGDGTMVQ
GDSNVSGSTFGTRGVGQGRNVTTHRQRQKGAVGVGANSKAPGIGERCDGV
RHELEGLDDILDDMDGGNSPTAARGVDVVTETKRTAMEEVQGATIKGRTA
SFGTKYHTKQDILNEMNRTPGYRDLVLEEDVFAAIKQLLSWTPPPKWERS
RDRHKAQLIAAAGVILKKALILDGPPGFWPLPLEGPSGDRVQRWKMSAAV
VPVLIFRRKKSHRKAAGGGAHSGGRTRHGVWSFGASGFRYASKPPVLPAA
RIP*
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