prot_Ecto-sp6_S_contig87.17800.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig87.17800.1
Unique Nameprot_Ecto-sp6_S_contig87.17800.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length986
Homology
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BLAST of mRNA_Ecto-sp6_S_contig87.17800.1 vs. uniprot
Match: A0A6H5JBR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBR8_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 5.880e-32
Identity = 77/101 (76.24%), Postives = 79/101 (78.22%), Query Frame = 0 
Query:  885 RDKPWMVRIVRKFGSRSSGSMPEATRAGEGVKRELCDGDAVSETGIDEHDVAERGREMASLILNDGGSAQGASALVSPFMGCRKRRKMMDATTTGATTGKL 985
            RDKPWMVRIVRK GSR+ GSMPEAT AGE VKRELCDGDAVSE G+DEHDVAERGR              G SA VSPFMGCRKRRKMMDA TTGATTGKL
Sbjct: 1307 RDKPWMVRIVRKLGSRNGGSMPEATGAGECVKRELCDGDAVSEAGMDEHDVAERGR--------------GTSASVSPFMGCRKRRKMMDALTTGATTGKL 1393
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BLAST of mRNA_Ecto-sp6_S_contig87.17800.1 vs. uniprot
Match: D7FZC4_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC4_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 3.360e-27
Identity = 65/100 (65.00%), Postives = 72/100 (72.00%), Query Frame = 0 
Query:  886 DKPWMVRIVRKFGSRSSGSMPEATRAGEGVKRELCDGDAVSETGIDEHDVAERGREMASLILNDGGSAQGASALVSPFMGCRKRRKMMDATTTGATTGKL 985
            DKPWMVR+ RKFGSR+ GSMPE   AGE VK ELCDGD  SE GIDEHDVAER  E+A + L+   S +    L  PFMGC KRRKMMDAT+T  TTG L
Sbjct:  498 DKPWMVRVFRKFGSRNGGSMPEVKEAGENVKAELCDGDVASEAGIDEHDVAERRPEVAPVPLDGCRSTRSNPVLTPPFMGCGKRRKMMDATSTLPTTGIL 597
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig87.17800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBR8_9PHAE5.880e-3276.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZC4_ECTSI3.360e-2765.00EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZC4... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig87contigEcto-sp6_S_contig87:261163..267828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig87.17800.1mRNA_Ecto-sp6_S_contig87.17800.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig87 261163..269322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17800.1 ID=prot_Ecto-sp6_S_contig87.17800.1|Name=mRNA_Ecto-sp6_S_contig87.17800.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=986bp
MVRECMHPDCTKEPSFGAAGTKQRLYCLTHKPEGMVNNHRKECAQPGCTT
LSTYGYESTRGRKVAEYCARHALEGMVCVTNKRCAHPACLKQPTYGMALR
GKPEYCFAHRLEGMEDVRNKKRCAHPGCGKHPSKGVAGSKVAEYCGPHAK
EGMVAVQNSCRHPGCPKKASYGVAGCPRKEALYCKPHAKEGMVSVEGNHC
QHQGCYAVAAYGTYGSEKKEFCGRHATKDMIGVARPCMKAGCATARSHGA
PGSKAPRFCPQHASEGMVDLSQSSCGQPGCLLVPSFSVSGSAPATFCRRH
ATEGMIRIPNKAHRVCEYPDCVRRACRGVPGSNDPKFCRQHAEEGMTDLF
HKVCEHQNCLTSASYGAQGSTKAQFCAKHAEDGMVNVAHRRCGSSGCSGL
AKFGTVGTKKARFCPTHAGEGMIDLSKNRCGQPGCLLVPRFSVSGSGPAT
FCRRHATKDMVRIPKNKAHRVCEYPDCARPACRGVPGSKGPRFCPQHAIE
GMIDISKNSCGQPGCLLVPAFSVSGSAPATFCRRHATEGMSRIPNKFHRV
CEYPECAHRACRGVPGSKVPRFCPQHASEGMVDLSKSSCGQPGCLLVPAF
SVSGSAPATFCRRHATEGMIRIPNKFHRVCEYQDCVRRAYHGVPGSKDPK
FCRQHAEEGMTDLLHKICEHQNCVTSASYGAQGSTKAQFCAKHRGEGMVN
VAHRRCGSSGCSGLARFGTVGTKKGRFCPTHAGEGMVDMKKGTCVHPGCS
ARAKFAEAGSDKAEHCRQHAREGAVDVVSKGCAHPGCTKFPSYGAVGSKI
PLFCGPHATEGMVTVRGLKCSHALCNEWPSFGRPGNKKGEFCGRHAAEGM
VHIRRERCSSPGCTLLPIFGACATSKAEVCTRHARDKPWMVRIVRKFGSR
SSGSMPEATRAGEGVKRELCDGDAVSETGIDEHDVAERGREMASLILNDG
GSAQGASALVSPFMGCRKRRKMMDATTTGATTGKL*
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