prot_Ecto-sp6_S_contig87.17794.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig87.17794.1
Unique Name	prot_Ecto-sp6_S_contig87.17794.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	1276

Homology

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BLAST of mRNA_Ecto-sp6_S_contig87.17794.1 vs. uniprot
Match: D8LQW0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQW0_ECTSI)

HSP 1 Score: 1302 bits (3370), Expect = 0.000e+0
Identity = 969/1061 (91.33%), Postives = 977/1061 (92.08%), Query Frame = 0

Query:  218 AVVAKRPSPLRYLSPAREQQKDEIFSFGRSSSSGGGNEGGKREMFYFGKSGGGDFGDTPNTPGPGQPTPSTPRVKQHRSRPTGTDGEHLPPETRGAAFPMTPKVARGPDTPGYASTPCICSPPAPLHRGITGSGKPRASSRLSIGTDCSGPSSGSGRPXXXXXXXXXXXXX-GGQGLAPGWAEGEEDFDRSGTTAAVAVVAAAARRPARARRKCRLNQRKLNLADDSDSCGESTAEADXXXXGAETSGGLRDGSQSSGGSRAADSCRRERSTNRKEQLLDASSSERFSEDFCGRGGQEGRAGQGSGAWAGAGAEACPKERGVSRRHRRKRKPVVRQDEETLIDFKGRMAAIASATRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSTPERRGKRGEEPGRAXXXXA--VATARLDGGVTASPKREGAAGRSAVRPLRTTLKPSERTAPKTRPWPDLERIRYEPPESAITTPLRRSDWKVPHGSAMHALAAALDEAAGSTACSSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRRQAEEDALRAAREREARAAWIKERILMRMLEGRKAAFLAWAKHTRACRNARQMVKSRTDSLSLRVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSALARSALSGLAGTRSRFVRWRAWARRKAAARRMALRAREAWLQRCFLALAGNQLRLRQRIEDRRMATLAAVFQGWRVGLGRLLRARLAPTSERGTLTADDGAPGGGGGTPCDAIDGAHLDSSVGVEGWGFAPAREEEKLEAFSPGEGGAESPDNDGGGAGGTADRGLGKRSEASGVGRAVAFGGDAVSPSDGGATGARVLLLPPSAFFASGKTLVPNKAVEEEEVGASVEAAGTGRWPGGGDGSAAVEEGGARGSRRGASRHRKRRPRKGGDGSSRRAKSP 1275
            AVVAKRPSPLRYLSPAREQQKDE+FSFGRSSSSGGGNEGGKREMFYFGKSGGG+FGDT NTPGPGQPTPSTPRV QHRSRPTGTDGEHLPPETRGAAFPMTPKVARGPDTPGYASTPCICSPPAPLHRGITGSGKPRASSRLSIG DCSGPS GSGRPXXXXXXXXXXXXX GGQGLAP WAEGEED DRSGT AA A VAAAARRPARARRKCRLNQRK NLADDSDSCG ST EAD    GAETSGGLRDGSQSS GSRAADSCRRERSTNRKEQLL+ASSSERFSEDFCGRGGQEG AGQG GAWAGAGAEACPKERGVSRR      PVVRQDEETLIDFKGRMAAIASATRL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 XXXX   VATARLDGGVTASPKREGAAGRSAVRPLRTTLKPSERTAPKTRPWPD ERIRYEPPESAITTPLRRSDWKVPHGSAMHALAAALDEAAGSTACSSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRRQAEEDALRAAREREARAAWIKERILM MLEGRKAAFLAWAKHTRACRNARQ+VK RTDSLSLRVLT          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSALARSALSGLAGTR RFVRWRAWARR+AAARRMALRAREAWLQRCFLALAGNQLRLRQR+EDRRMA LAAVFQGWRVGLGRLLRARLA TSERGTLTADDG PGGGGGTP DAIDGAHL SSVGVEGWGFAPAREEEK EAFSPGEGGA SPDN      G    GLGKRSEASGVG AVAF GDAVSPSDGGATGARVLLLPPSAFFAS +TLV  KAV EEEVGASVEAAGTGRWPGGGDGSAAVE+GGARGSRRGASRHRKRRPRKGGDGSSRRAKSP
Sbjct:    2 AVVAKRPSPLRYLSPAREQQKDEVFSFGRSSSSGGGNEGGKREMFYFGKSGGGNFGDTSNTPGPGQPTPSTPRVGQHRSRPTGTDGEHLPPETRGAAFPMTPKVARGPDTPGYASTPCICSPPAPLHRGITGSGKPRASSRLSIGIDCSGPSGGSGRPXXXXXXXXXXXXXXGGQGLAPEWAEGEEDCDRSGTPAA-AAVAAAARRPARARRKCRLNQRKPNLADDSDSCGGSTTEADADGDGAETSGGLRDGSQSSAGSRAADSCRRERSTNRKEQLLNASSSERFSEDFCGRGGQEGGAGQGLGAWAGAGAEACPKERGVSRRXXXXXXPVVRQDEETLIDFKGRMAAIASATRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATARLDGGVTASPKREGAAGRSAVRPLRTTLKPSERTAPKTRPWPDFERIRYEPPESAITTPLRRSDWKVPHGSAMHALAAALDEAAGSTACSSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRRQAEEDALRAAREREARAAWIKERILMHMLEGRKAAFLAWAKHTRACRNARQVVKWRTDSLSLRVLTAWRGEANRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSALARSALSGLAGTRGRFVRWRAWARRRAAARRMALRAREAWLQRCFLALAGNQLRLRQRLEDRRMAALAAVFQGWRVGLGRLLRARLASTSERGTLTADDGPPGGGGGTPRDAIDGAHLYSSVGVEGWGFAPAREEEKTEAFSPGEGGAGSPDN------GXXXAGLGKRSEASGVGEAVAFDGDAVSPSDGGATGARVLLLPPSAFFAS-ETLVATKAVVEEEVGASVEAAGTGRWPGGGDGSAAVEDGGARGSRRGASRHRKRRPRKGGDGSSRRAKSP 1054

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig87.17794.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig87.17794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LQW0_ECTSI	0.000e+0	91.33	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 843..863

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig87	contig	Ecto-sp6_S_contig87:190042..200088 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig87.17794.1	mRNA_Ecto-sp6_S_contig87.17794.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig87 189965..201847 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17794.1 ID=prot_Ecto-sp6_S_contig87.17794.1|Name=mRNA_Ecto-sp6_S_contig87.17794.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1276bp
MGIDRRSWACQSKRASSSSDNEGTLVEASPSSPAARNPTTPQDDRGYCRE
SSLGRKEFPGGIGAVGSDRRPWVNQASFLEVTRSPSYLKGTAGLTLSPSP
AAAAAAAAVVTGTTTQHPKAVVARSPSSTTVMESPPAPVRTGRPSKPRRA
AAAAAAAAAAAGGGVRVPPLGGGSGGVAQGQHLLPPPAIRREVGSGLFKS
DDRNSCGRGVAGLSDVTAVVAKRPSPLRYLSPAREQQKDEIFSFGRSSSS
GGGNEGGKREMFYFGKSGGGDFGDTPNTPGPGQPTPSTPRVKQHRSRPTG
TDGEHLPPETRGAAFPMTPKVARGPDTPGYASTPCICSPPAPLHRGITGS
GKPRASSRLSIGTDCSGPSSGSGRPPPAAAAAAAAGDDGGQGLAPGWAEG
EEDFDRSGTTAAVAVVAAAARRPARARRKCRLNQRKLNLADDSDSCGEST
AEADADGDGAETSGGLRDGSQSSGGSRAADSCRRERSTNRKEQLLDASSS
ERFSEDFCGRGGQEGRAGQGSGAWAGAGAEACPKERGVSRRHRRKRKPVV
RQDEETLIDFKGRMAAIASATRLAAAATATSTTSSRNAFVMATPPHPISS
SAPPLPRRRLLSAASPSLSPPPPAAAAAAPEGRCPLVGGGSSNTRRPSAA
DGSPDPAAGSSSDADNVVAGGSSEVAWGGSSSGSAWSTPERRGKRGEEPG
RAAAAAAVATARLDGGVTASPKREGAAGRSAVRPLRTTLKPSERTAPKTR
PWPDLERIRYEPPESAITTPLRRSDWKVPHGSAMHALAAALDEAAGSTAC
SSPLDMRQEGRESVRRRYQERADHFRLIQAARETSAGKGSAMLLAMRQRR
QAEEDALRAAREREARAAWIKERILMRMLEGRKAAFLAWAKHTRACRNAR
QMVKSRTDSLSLRVLTAWREEANRSRRIREFVIKYVSGSKRAMFMAWKES
TRKSVAVRKMALSQLQGGRKSCFYVWRDATRANVRRRELALEKSALARSA
LSGLAGTRSRFVRWRAWARRKAAARRMALRAREAWLQRCFLALAGNQLRL
RQRIEDRRMATLAAVFQGWRVGLGRLLRARLAPTSERGTLTADDGAPGGG
GGTPCDAIDGAHLDSSVGVEGWGFAPAREEEKLEAFSPGEGGAESPDNDG
GGAGGTADRGLGKRSEASGVGRAVAFGGDAVSPSDGGATGARVLLLPPSA
FFASGKTLVPNKAVEEEEVGASVEAAGTGRWPGGGDGSAAVEEGGARGSR
RGASRHRKRRPRKGGDGSSRRAKSP*