prot_Ecto-sp6_S_contig87.17783.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig87.17783.1
Unique Name	prot_Ecto-sp6_S_contig87.17783.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	707

Homology

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BLAST of mRNA_Ecto-sp6_S_contig87.17783.1 vs. uniprot
Match: D8LQX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX2_ECTSI)

HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0
Identity = 637/706 (90.23%), Postives = 647/706 (91.64%), Query Frame = 0

Query:    1 VVLPVRNAVLGLRPVGIAPGPQKSGVDKEEAATGTHARPSINISSSDDDNNDCIIRSNTDSGSWTLLRGEVSGAFRAADRLGRVETAGNAPLVLRLRFSVSLSLKPPEDLACPTEPRNRAAAQTMGGYPKEAVGMAAAPYATVGAEREPVPPHGGVVFDETGARRAGRPGGFGLADMPTRSAGRARGKGDRRTTRAKRGXXXXXXXXXXXDRRAHDRGAALLRRRVKRQECIARENERMERRLKVIREAAPNPREPRCYERVGRAPCVPQGAGAAGGAGVGFTEQPRXXXXXXXRSDGTVVGGLHGEAPPHAAGVRSTVESGSNRRRVGHPVVAGCWDSTTPSAGGGEAAAAGKKETAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKEVSAVVAAESSGAGVVFDRRTLDIDGEGGLVEEGLAAELRRQEELYKALAEARRRVVAAGEAARLAREADLKELDELRSRLTEAEARQTRHQWRRENETVTXXXXXXXXXXXXXXXXXESPRDDERSPTRTAGAXXXXXXXXXXAARLALDGVKEDRGXXXXXXTLPKDALERAQDLALSLRVEVETLRLEESFGAGSGADVNVARVGRAPSDAQDEVARLKARLKKKTRRLEGAIFDRDAIRAEYQHLIGTGQRSALKESLAWLEHAALHLSDTKLK 706
            VVLPVRNAVLGL+PV IAPGPQKSGVDKEEAATGTHARPSINISSSDDDNND IIR+NTDSGSW LLRG+VSGAFRAADRLGRVETAGNAPLVL+LR SVS SLKPPEDLACPTEPRNRAAAQTMGGYPKEAVG AAAPYATVGAEREPVPPHGGVVFDETGARRAG+PGG GLADMPTRSAGRARGKGDRRTTRAKRG           D RAHD GAALLRR+VKRQECIARENERMERRLKVIREA PN REPRCYERVGRAPCVP+G GAAGGAGVGFTEQPR  XXXX RSDGTVVGGL GEAPPHAAGVRSTVESGSNRRRVGHPVVAGCWDSTTPSAGGGEAAAAGKKETAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKEVSAVVAAESSGA V FDRRTLDID EGGLVEEGLAAELRRQEELY ALAEARRRVVAAGEAARLAREADLKELDELRSRLTEAEAR TRHQWRRENETVTXXXXXXXXXXXXXXXXX                XXXXXXXXXX  RLALDGV+    XXXXXXTLPKDALERA+DLALSLRVEVETLRLEE+ GAGSGADVNVA VGRAPSDAQDEVARLKARLK KTRRLEGAIFDRDAIRAEYQHLIG GQRSALKESLAWLEHAAL LSDTKLK
Sbjct:  427 VVLPVRNAVLGLQPVDIAPGPQKSGVDKEEAATGTHARPSINISSSDDDNNDGIIRNNTDSGSWRLLRGDVSGAFRAADRLGRVETAGNAPLVLQLRLSVSFSLKPPEDLACPTEPRNRAAAQTMGGYPKEAVGTAAAPYATVGAEREPVPPHGGVVFDETGARRAGKPGGLGLADMPTRSAGRARGKGDRRTTRAKRGGGHANSGGGNRDWRAHDHGAALLRRKVKRQECIARENERMERRLKVIREAVPNTREPRCYERVGRAPCVPRGGGAAGGAGVGFTEQPRHRXXXXQRSDGTVVGGLQGEAPPHAAGVRSTVESGSNRRRVGHPVVAGCWDSTTPSAGGGEAAAAGKKETAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKEVSAVVAAESSGAVVAFDRRTLDIDDEGGLVEEGLAAELRRQEELYTALAEARRRVVAAGEAARLAREADLKELDELRSRLTEAEARHTRHQWRRENETVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLALDGVEXXXXXXXXXXTLPKDALERAKDLALSLRVEVETLRLEEALGAGSGADVNVAGVGRAPSDAQDEVARLKARLKNKTRRLEGAIFDRDAIRAEYQHLIGKGQRSALKESLAWLEHAALQLSDTKLK 1132

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BLAST of mRNA_Ecto-sp6_S_contig87.17783.1 vs. uniprot
Match: A0A6H5KVJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ5_9PHAE)

HSP 1 Score: 669 bits (1727), Expect = 5.340e-234
Identity = 446/523 (85.28%), Postives = 462/523 (88.34%), Query Frame = 0

Query:  125 MGGYPKEAVGMAAAPYATVGAEREPVPPHGGVVFDETGARRAGRPGGFGLADMPTRSAGRARGKGDRRTTRAKRGXXXXXXXXXXXDRRAHDRGAALLRRRVKRQECIARENERMERRLKVIREAAPNPREPRCYERVGRAPCVPQGAGAAGGAGVGFTEQPRXXXXXXXRSDGTVVGGLHGEAPPHAAGVRSTVESGSNRRRVGHPVVAGCWDSTTPSAGGGEAAAAGKKETAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSLTVASLENGAHGRCASSRTTGKEVSAVVAAESSGAGVVFDRRTLDIDGEGGLVEEGLAAELRRQEELYKALAEARRRVVAAGEAARLAREADLKELDELRSRLTEAEARQTRHQWRRENETVTXXXXXXXXXXXXXXXXXESPRDDERSPTRTAGAXXXXXXXXXXAARLALDGVKEDRGXXXXXX-TLPKDALERAQDLALSLRVEVETLRLEESFGAGSGADVNVARVGRAPSDAQDEV 646
            MGG+PKEAVG AAAPYATVGAEREPVPPHGGVVFDETG+RRAGRPGG   AD+P RSAGRA+G G+RRTTR    XXXXXXXXXXX             R VKRQECIARENERMERRLKVIREAAPNPREPRCY+RVGRAPCVP+G GA             XXXXXXXRSDG V  GLHG+APPHAAGVRSTVESG+NRRR GH V AGCWDSTTPSAG GEAAAAGK  TAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSL+VASLENGAHGRCASSRTTGKEVSAV  A SSGAGVVFDRRTLDIDG+GGLVEEGLAAELRRQEELYKALAE+RRR VAAGEAARLAREADLKELDELRSRLTEAEARQTRHQWRRENETVT XXXXXXXXXXXXXXXX SPRDDERSPTR AG XXXXXXXXXXAARLALDGVKEDRG XXXX   LPKDALERAQDLALSLRVEVETLRLEE+ GAG+GADVNVA +GRAPSDAQ+EV
Sbjct:    1 MGGHPKEAVGTAAAPYATVGAEREPVPPHGGVVFDETGSRRAGRPGGLVPADIPIRSAGRAQGNGNRRTTRTXXXXXXXXXXXXXXXXXXXXXXXXXXXR-VKRQECIARENERMERRLKVIREAAPNPREPRCYKRVGRAPCVPRGGGAXXXXXXXXXXXXXXXXXXXXRSDGPVAEGLHGDAPPHAAGVRSTVESGNNRRRGGHQVAAGCWDSTTPSAGSGEAAAAGKV-TAGWRELYDEREALASAVEAAAAXXXXVRARVEALRAKTLWTEANARRSSLSVASLENGAHGRCASSRTTGKEVSAVETANSSGAGVVFDRRTLDIDGDGGLVEEGLAAELRRQEELYKALAESRRRTVAAGEAARLAREADLKELDELRSRLTEAEARQTRHQWRRENETVTTXXXXXXXXXXXXXXXXXSPRDDERSPTRAAGXXXXXXXXXXXAARLALDGVKEDRGGXXXXAGALPKDALERAQDLALSLRVEVETLRLEEALGAGTGADVNVAGLGRAPSDAQEEV 521

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BLAST of mRNA_Ecto-sp6_S_contig87.17783.1 vs. uniprot
Match: D8LQW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW9_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.700e-19
Identity = 51/57 (89.47%), Postives = 52/57 (91.23%), Query Frame = 0

Query:  621 SFGAGSGADVNVARVGRAPSDAQDEVARLKARLKKKTRRLEGAIFDRDAIRAEYQHL 677
            + GA SGADVNVA VGRAPSDAQDEVARLKARLK KTRRLEGAIFDRDAIRAEYQ L
Sbjct:   70 ALGAESGADVNVAGVGRAPSDAQDEVARLKARLKNKTRRLEGAIFDRDAIRAEYQVL 126

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig87.17783.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig87.17783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LQX2_ECTSI	0.000e+0	90.23	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KVJ5_9PHAE	5.340e-234	85.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQW9_ECTSI	1.700e-19	89.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 463..483
None	No IPR available	COILS	Coil	Coil	coord: 374..394
None	No IPR available	COILS	Coil	Coil	coord: 495..522
None	No IPR available	COILS	Coil	Coil	coord: 599..619

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig87	contig	Ecto-sp6_S_contig87:80741..85328 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig87.17783.1	mRNA_Ecto-sp6_S_contig87.17783.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig87 80741..85328 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig87.17783.1 ID=prot_Ecto-sp6_S_contig87.17783.1|Name=mRNA_Ecto-sp6_S_contig87.17783.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=707bp
VVLPVRNAVLGLRPVGIAPGPQKSGVDKEEAATGTHARPSINISSSDDDN
NDCIIRSNTDSGSWTLLRGEVSGAFRAADRLGRVETAGNAPLVLRLRFSV
SLSLKPPEDLACPTEPRNRAAAQTMGGYPKEAVGMAAAPYATVGAEREPV
PPHGGVVFDETGARRAGRPGGFGLADMPTRSAGRARGKGDRRTTRAKRGG
GHANGGGGNRDRRAHDRGAALLRRRVKRQECIARENERMERRLKVIREAA
PNPREPRCYERVGRAPCVPQGAGAAGGAGVGFTEQPRHRRRRRQRSDGTV
VGGLHGEAPPHAAGVRSTVESGSNRRRVGHPVVAGCWDSTTPSAGGGEAA
AAGKKETAGWRELYDEREALASAVEAAAAEAAAVRARVEALRAKTLWTEA
NARRSSLTVASLENGAHGRCASSRTTGKEVSAVVAAESSGAGVVFDRRTL
DIDGEGGLVEEGLAAELRRQEELYKALAEARRRVVAAGEAARLAREADLK
ELDELRSRLTEAEARQTRHQWRRENETVTTTPPPIGAAAAVPLRRRESPR
DDERSPTRTAGARAAGAAAAGDAARLALDGVKEDRGGGGGGGTLPKDALE
RAQDLALSLRVEVETLRLEESFGAGSGADVNVARVGRAPSDAQDEVARLK
ARLKKKTRRLEGAIFDRDAIRAEYQHLIGTGQRSALKESLAWLEHAALHL
SDTKLK*