prot_Ecto-sp6_S_contig86.17743.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig86.17743.1
Unique Nameprot_Ecto-sp6_S_contig86.17743.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length1442
Homology
BLAST of mRNA_Ecto-sp6_S_contig86.17743.1 vs. uniprot
Match: A0A6H5JHC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC6_9PHAE)

HSP 1 Score: 1154 bits (2985), Expect = 0.000e+0
Identity = 957/1241 (77.12%), Postives = 988/1241 (79.61%), Query Frame = 0
Query:   81 GAARASAPVLASPGLYLDGARRGGGGRARSSRAGVGLPSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHMSQSEADDSETDDGPADAATEGSSRKLPRRSSA-RGAQAGTGGGGGR--RQSRVSPGPSPRLAPKGAGGSSNGGITTPVNGTRMRGCSVKNPMGEPESAVRGSGGAAGGRGATTPASGYTADLSAGTTRVSKARARTGPAAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----AQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRHPRARGTRNGTDPAARSERGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGLSSSVAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPLSNRKPCPKVGTDSAGIDRGVEPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPHHTPVAASLPGLASPGTSLFRRAAAGAVTGSGVVDRAGGVASSSHGKASAGDTGGDSGGRSLATGEKVVGGRRGRSDAGVKGGRAAATV--------------VMSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAVRGAGAETAAAGTGPGVAXXXXXXXXXXXXXXXGDDGGRDLSAAXXXXXXXXXXXXXXGGMEVAPQAGVHPRGDDADTAEESDTETVQRSCHDGSSPKEGGFPADDPGTEAPPGGQTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXVVDAAQGSNTGERSASVADVRVSTPAVEMGALGAEGTGRSGVGERRGSARLRNGGVGGRRRGERGRRDRGVACSSSPLPGEGEEAKDGGAPGKAVAAAGVDGAGRGDGRDAVREDVSAAPVASPSAXXXXXXXXXXXXXGTVSVEDAAPAGRAGSKRRASTRRGVAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVASSSAAARVADALSAGKAGPAVSSQSLDDITEAVVAMSALVGEDRTVGQPGASQENANSVENHDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVADGKGSSTDVAKKAGAAVSEETRGGDKSKTGLVGTKRGLARDEDGGEGADGRHGRRGKGGGRRSTSKTRGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAXXXXXXGFVAFGDDDADEMALRDNGPDPVHEGEGDNNDRVSPTNGSKSSA 1299
            G ARA+A VLAS GL L+G RRGGGGRAR SRAG G+ SPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRG +SQSEADDSETDDG A+AAT GSSRKL RRSS+ RGAQAGT        RQSRVSPGPSPRLAP G GGS NGGITTP++G   RG S KNPMGEPE  VRGSGGAAGGRGATTPASGY ADLSAGTTRVSKAR RTGPAAG  XXXXXXXXXXXXXX                           AQDGWSCGKCTFLN+LAARKC MC+SAAPRA    PR RGTRNGTDPAARSER MS             XXXXXXXXXXXXXXX ERGL S+ AAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAP+SNRK CPKVGTDSAGIDRGV+PSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAP H P AASL  LASP TSLFRRAAAGA  GSGVVDR  GVASSS G+AS  D GGD GG SLATGEKVVGGRRG SDAGVKGGRAAA                V SLPRPCDEEEGS APAIRLFEAVPSPS SLLGRPPPDAAV GAGAET AAGTGPGVA               GD GG      XXXXXXXXXXXXXX  +EVA Q GV PRG DADT EESD ETVQRSCHDGS PKEGG PADDPGTEAPP GQTLLE  XXXXXXXXXXXXXXXXXXXXXX  VVDAAQGS  GERSASVADVRV T AVEMG LG EGTGRSGVGERRGSARLRNGGVG RRR +RG++  GVA SSSPLPGEG+E + GG  GKAV AAGVD AG+GD  DA+RED SAAPVAS SA               VSVEDAAP GR GSKRRASTR GVAAS  XXXX    XXXXXXXXXXXXXXXXXX    GG  SS+AAARVA A+SAGKAGPAVSSQSLDDITEAVVAMSALVGEDRTVGQPG S+EN + VENH T  XXXXXXXXXXXXXXXXXXXXXXXXX   KV DGKGSSTDVA +AG  VSEE   GDKSK GLVGTKRGL+RDE+GGE    +HGRRGKG             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGA XXXXXGFVAFGDD ADEMAL DN PDPVHEGEGDNNDRV+P NGSKS A
Sbjct:  457 GPARAAAQVLASAGLDLEGERRGGGGRARGSRAGGGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGLVSQSEADDSETDDGSAEAATGGSSRKLSRRSSSIRGAQAGTXXXXXXXXRQSRVSPGPSPRLAPNGVGGSGNGGITTPLSGMWRRGRSAKNPMGEPEGVVRGSGGAAGGRGATTPASGYAADLSAGTTRVSKARPRTGPAAGXXXXXXXXXXXXXXXXDDGKRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNDLAARKCAMCRSAAPRAXXXXPRTRGTRNGTDPAARSEREMSSPSPRGGAGIPPAXXXXXXXXXXXXXXXGERGLPSAAAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPVSNRKSCPKVGTDSAGIDRGVQPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPPHPPAAASLAELASPDTSLFRRAAAGAAPGSGVVDRVRGVASSSCGEASGSDAGGDCGGGSLATGEKVVGGRRGGSDAGVKGGRAAAASATANTTPGGGQRAGVGSLPRPCDEEEGSAAPAIRLFEAVPSPSISLLGRPPPDAAVGGAGAETVAAGTGPGVAGAVVDGAGLRDAARGGDGGGHXXXXXXXXXXXXXXXXXXXXXVEVAAQVGVRPRGKDADTPEESDAETVQRSCHDGSPPKEGGSPADDPGTEAPPDGQTLLERAXXXXXXXXXXXXXXXXXXXXXX--VVDAAQGSKAGERSASVADVRVGTAAVEMGPLGNEGTGRSGVGERRGSARLRNGGVGVRRREQRGKKYEGVARSSSPLPGEGQEEQGGGGSGKAVGAAGVDRAGQGDEGDAIREDASAAPVASRSAAEEKASAAAADP---VSVEDAAPTGRGGSKRRASTRGGVAASVAXXXXAVSGXXXXXXXXXXXXXXXXXXALAGGGT-SSNAAARVAAAVSAGKAGPAVSSQSLDDITEAVVAMSALVGEDRTVGQPGVSRENVDLVENHGTTAXXXXXXXXXXXXXXXXXXXXXXXXXR--KVTDGKGSSTDVAYEAGEVVSEEASSGDKSKAGLVGTKRGLSRDENGGEETGRKHGRRGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAVXXXXXGFVAFGDDXADEMALCDNDPDPVHEGEGDNNDRVAPANGSKSYA 1689          
BLAST of mRNA_Ecto-sp6_S_contig86.17743.1 vs. uniprot
Match: D7G1G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G0_ECTSI)

HSP 1 Score: 1109 bits (2869), Expect = 0.000e+0
Identity = 798/999 (79.88%), Postives = 811/999 (81.18%), Query Frame = 0
Query:   81 GAARASAPVLASPGLYLDGARRGGGGRARSSRAGVGLPSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHMSQSEADDSETDDGPADAATEGSSRKLPRRSSARGAQAGTGGGGGR--RQSRVSPGPSPRLAPKGAGGSSNGGITTPVNGTRMRGCSVKNPMGEPESAVRGSGGAAGGRGATTPASGYTADLSAGTTRVSKARARTGPAAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRHPRARGTRNGTDPAARSERGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGLSSSVAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPLSNRKPCPKVGTDSAGIDRGVEPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPHHTPVAASLPGLASPGTSLFRRAAAGAVTGSGVVDRAGGVASSSHGKASAGDTGGDSGGRSLATGEKVVGGRRGRSDAGVK-------------GGRAAATVVMSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAVRGAGAETAAAGTGPGVAXXXXXXXXXXXXXXXGDDGGRDLSAAXXXXXXXXXXXXXXGGMEVAPQAGVHPRGDDADTAEESDTETVQRSCHDGSSPKEGGFPADDPGTEAPPGGQTLLEXXXXXXXXXXXXXXXXXXXXXXXXXXVVDAAQGSNTGERSASVADVRVSTPAVEMGALGAEGTGRSGVGERRGSARLRNGGVGGRRRGERGRRDRGVACSSSPLPGEGEEAKDGGAPGKAVAAAGVDGAGRGDGRDAVREDVSAAPVASPSAXXXXXXXXXXXXXGTVSVEDAAPAGRAGSKRRASTRRGVAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVASSSAAARVADALSAGKAGPAVSSQSLDDITEAVVAMSALVGEDRTVGQPGASQENANSVENHDTA 1064
            G ARASAPVLASPGLYLDGARRGGGGRARSSRAGVG+ SPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGH+SQSEADDSETDDGPADAAT GS RKL RRSS RG Q G G       RQSRVSPGPSPRLAPKG GGS  GGITTPV+GTR RGCS KNPM EPESAVRGSGGAAGGRG TTPASGY ADLSAGT+RVSKARARTGPAA     XXXXXXXXX                         AQDGWSCGKCTFLNELAARKCVMCQSAAPRASRR PRARGTRNGTDPAARSERGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGLSS+ AAA                      SAKSTRGPPPLAAP+SNRK CPKVGTDSAGIDR VEPS ASG SHGKHQQGLLQG+GGIGGATPPGGDAPHH PVAASLPGLASPGTSLFRRAAAGAV GS VVDRAGGVASSSHG A AGDTGGDSGGR LATGEKVVGGRRG                    GG+ A   V+SLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAVRGAGAET AAGTGPGVA               GDDGG      XXXXXXXXXXXXXX GMEVAPQ G HPRG+DADTAEESDTETVQRSCHDGSSPKEGG PADDPGTEAPPGGQTLL XXXXXXXXXXXXXXXXXXXXXXXXXXV DAAQGSNT                        E TGRSGVGERRGSARLRNGGVGGRRRGERGR+DRGVACS+SPLPGEG+EAKDGGAP KAVAAAGVDGAGRGDG DAVRED SAAPVASPSA             GTVSVEDAAPAGRAGSKRRASTRRGVAAS      XXXXXXXXXXXXXXXXXXXXXXXXXXGGVASSSAAARVADALSAGKAGP VSSQSLDDITEAVVAMSALVGEDRTVGQPGASQENANSVENHDTA
Sbjct:  480 GPARASAPVLASPGLYLDGARRGGGGRARSSRAGVGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADDSETDDGPADAATGGSYRKLSRRSSIRGPQTGAGXXXXXXXRQSRVSPGPSPRLAPKGVGGSGTGGITTPVSGTRRRGCSAKNPMREPESAVRGSGGAAGGRGTTTPASGYAADLSAGTSRVSKARARTGPAA-----XXXXXXXXXGRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRPPRARGTRNGTDPAARSERGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGLSSAAAAAXXXXXXXXXXXXXXXXXXXXXXSAKSTRGPPPLAAPVSNRKLCPKVGTDSAGIDRDVEPSRASGGSHGKHQQGLLQGNGGIGGATPPGGDAPHHPPVAASLPGLASPGTSLFRRAAAGAVPGSSVVDRAGGVASSSHGNAGAGDTGGDSGGRRLATGEKVVGGRRGXXXXXXXXXXXXXTLNTTPGGGQGAG--VVSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAVRGAGAETVAAGTGPGVAGAAVDGAGLRDAARGGDDGGXXXXXXXXXXXXXXXXXXXXXGMEVAPQVGGHPRGNDADTAEESDTETVQRSCHDGSSPKEGGSPADDPGTEAPPGGQTLLXXXXXXXXXXXXXXXXXXXXXXXXXXXV-DAAQGSNT------------------------ERTGRSGVGERRGSARLRNGGVGGRRRGERGRKDRGVACSTSPLPGEGQEAKDGGAPEKAVAAAGVDGAGRGDGGDAVREDASAAPVASPSAAAEEEASAATA--GTVSVEDAAPAGRAGSKRRASTRRGVAASVAAASSXXXXXXXXXXXXXXXXXXXXXXXXXXGGVASSSAAARVADALSAGKAGPVVSSQSLDDITEAVVAMSALVGEDRTVGQPGASQENANSVENHDTA 1444          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig86.17743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHC6_9PHAE0.000e+077.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1G0_ECTSI0.000e+079.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 334..358
e-value: 1.8E-5
score: 34.2
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 336..355
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 328..361
score: 8.908
NoneNo IPR availableGENE3D2.20.28.140coord: 329..377
e-value: 4.1E-7
score: 31.7
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 332..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig86contigEcto-sp6_S_contig86:373167..381938 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig86.17743.1mRNA_Ecto-sp6_S_contig86.17743.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig86 369239..386808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig86.17743.1 ID=prot_Ecto-sp6_S_contig86.17743.1|Name=mRNA_Ecto-sp6_S_contig86.17743.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=1442bp
MTKAVAIDKGPGHRPPQHHHRRKRTQEQAVLREGTPRRHPRGRRRSSLPG
RWAGEGCSGGAPRRRTGGSWSRGSVPRGGWGAARASAPVLASPGLYLDGA
RRGGGGRARSSRAGVGLPSPGDTSDVFGMSDGDETERTMLDSTDCDSKAA
NRGHMSQSEADDSETDDGPADAATEGSSRKLPRRSSARGAQAGTGGGGGR
RQSRVSPGPSPRLAPKGAGGSSNGGITTPVNGTRMRGCSVKNPMGEPESA
VRGSGGAAGGRGATTPASGYTADLSAGTTRVSKARARTGPAAGGGGSGGS
GGSGEGGRRRRAGKGAEDHPKEPVEEGEEGEAQDGWSCGKCTFLNELAAR
KCVMCQSAAPRASRRHPRARGTRNGTDPAARSERGMSSPPPRGGSGIPPA
EGAGGAASSGGRGAGGERGLSSSVAAAGDVSSPNGTWEGYEMGRSTASSS
AKSTRGPPPLAAPLSNRKPCPKVGTDSAGIDRGVEPSPASGDSHGKHQQG
LLQGSGGIGGATPPGGDAPHHTPVAASLPGLASPGTSLFRRAAAGAVTGS
GVVDRAGGVASSSHGKASAGDTGGDSGGRSLATGEKVVGGRRGRSDAGVK
GGRAAATVVMSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPPDAAV
RGAGAETAAAGTGPGVAGAAVDGAGLRDAARGGDDGGRDLSAADEREGDE
EAGEGETGGMEVAPQAGVHPRGDDADTAEESDTETVQRSCHDGSSPKEGG
FPADDPGTEAPPGGQTLLERAAEEEEEEEDEDASAGGAASTAAAAVVDAA
QGSNTGERSASVADVRVSTPAVEMGALGAEGTGRSGVGERRGSARLRNGG
VGGRRRGERGRRDRGVACSSSPLPGEGEEAKDGGAPGKAVAAAGVDGAGR
GDGRDAVREDVSAAPVASPSAAAAEEEASAAAAAGTVSVEDAAPAGRAGS
KRRASTRRGVAASVTAASSAVSAGRGGSKRRASTRGAAAASAPAAGGVAS
SSAAARVADALSAGKAGPAVSSQSLDDITEAVVAMSALVGEDRTVGQPGA
SQENANSVENHDTAAAAMILMAGSASSARGGRRRQQQQQQQQRKVADGKG
SSTDVAKKAGAAVSEETRGGDKSKTGLVGTKRGLARDEDGGEGADGRHGR
RGKGGGRRSTSKTRGATTKRRKQSSSPAEEAGDKDAAAGGAATPSSAASV
ASAAAVATATDADAATAAAPAAPEGKSAAAAAAATTDHVVESDDDDVGAV
DDDDDGFVAFGDDDADEMALRDNGPDPVHEGEGDNNDRVSPTNGSKSSAA
AGNSAISNGEGNSSRRRRKGRASDKPPGPVVAAPKAGKRLKRSSGGGASS
EAEGGAGGQGGGEGEGEIGRRSGGEEEEGGRWWSWGCDRRRRGGRGEERQ
AAGSGPSCVFRLAAWGSTGGSQRGSVPVQDPPPPRLRGLHV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf