prot_Ecto-sp6_S_contig85.17689.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig85.17689.1
Unique Nameprot_Ecto-sp6_S_contig85.17689.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length80
Homology
BLAST of mRNA_Ecto-sp6_S_contig85.17689.1 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 4.340e-28
Identity = 58/79 (73.42%), Postives = 66/79 (83.54%), Query Frame = 0
Query:    1 VQQKIDDLTRLDRSLYEAGKKEFEKRLAPYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMYRSMNVYKEPPDNHLF 79
            VQ KIDDLTRLDR LYEAGK EFEKRLAPYASSV+EDIP+FQELQ  I +YL GNSSS A  MY +M++YK+  DN+LF
Sbjct:  270 VQNKIDDLTRLDRVLYEAGKDEFEKRLAPYASSVQEDIPQFQELQGVIKDYLNGNSSSLAYQMYLNMHIYKKRLDNYLF 348          
BLAST of mRNA_Ecto-sp6_S_contig85.17689.1 vs. uniprot
Match: D8LRU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU7_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 6.460e-28
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:   25 KRLAPYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMYRSMNVYKEPPDNHLF 79
            KRLAPYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMYRSMNVYKEPPDNHLF
Sbjct:  277 KRLAPYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMYRSMNVYKEPPDNHLF 331          
BLAST of mRNA_Ecto-sp6_S_contig85.17689.1 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 8.270e-16
Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    1 VQQKIDDLTRLDRSLYEAGKKEFEKRLAPYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMYRSMN-VYKEPPDNHLF 79
            VQ +ID+LT LD++LY+AGKKEFEKRL+  ++S + ++  FQELQ  +  YL+GNSS  A  MYRSM+ VY +PP  + F
Sbjct:  280 VQARIDELTILDQALYDAGKKEFEKRLSSTSTSFQAELAGFQELQDNVCTYLEGNSSGLAREMYRSMDAVYTDPPPAYHF 359          
BLAST of mRNA_Ecto-sp6_S_contig85.17689.1 vs. uniprot
Match: A0A6H5JMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW5_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.180e-12
Identity = 36/76 (47.37%), Postives = 54/76 (71.05%), Query Frame = 0
Query:    1 VQQKIDDLTRLDRSLYEAGKKEFEKRLAPYASSVEEDIPRFQELQSAISEYLKGNSSSKANTMY--RSMNVYKEPP 74
            VQ+KID+LT LDR LY+AG   FE+ LAP+ + V+ D+  F+ELQ+ ++EYL+ N SS A  +Y  ++   Y++PP
Sbjct:  377 VQEKIDELTTLDRRLYDAGVAAFEESLAPFTAQVDADLEGFRELQTVVNEYLRDNPSSPAQALYSYKTAVYYEDPP 452          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JIK1_9PHAE4.340e-2873.42Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LRU7_ECTSI6.460e-28100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8E6_9PHAE8.270e-1653.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMW5_9PHAE1.180e-1247.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:524405..525448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17689.1mRNA_Ecto-sp6_S_contig85.17689.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig85 524405..525448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig85.17689.1 ID=prot_Ecto-sp6_S_contig85.17689.1|Name=mRNA_Ecto-sp6_S_contig85.17689.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=80bp
VQQKIDDLTRLDRSLYEAGKKEFEKRLAPYASSVEEDIPRFQELQSAISE
YLKGNSSSKANTMYRSMNVYKEPPDNHLF*
back to top