prot_Ecto-sp6_S_contig85.17670.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig85.17670.1
Unique Nameprot_Ecto-sp6_S_contig85.17670.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length128
Homology
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BLAST of mRNA_Ecto-sp6_S_contig85.17670.1 vs. uniprot
Match: D8LRT5_ECTSI (Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT5_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 7.320e-71
Identity = 122/125 (97.60%), Postives = 122/125 (97.60%), Query Frame = 0 
Query:    1 MITPCARVMAVATFATTRCGSFLYGGARFARTGAKQFAALHSSAQVEQTTKDHESLSRGNADDASLDSVLISTNPDLVVDHMKARRMGEDSVEAVQRIGDLMDTRRELIMTKEDALKQRNAMSAQ 125
            MITPCARVMAVATFATTRCGSFLYGGARFARTGAKQFAALHSSAQVEQTTKDHESLSR NADDASLDSVLISTNPDLVVDHMKARRMGEDSVEAV RIGDLMD RRELIMTKEDALKQRNAMSAQ
Sbjct:    1 MITPCARVMAVATFATTRCGSFLYGGARFARTGAKQFAALHSSAQVEQTTKDHESLSRSNADDASLDSVLISTNPDLVVDHMKARRMGEDSVEAVHRIGDLMDNRRELIMTKEDALKQRNAMSAQ 125
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig85.17670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRT5_ECTSI7.320e-7197.60Serine--tRNA ligase n=1 Tax=Ectocarpus siliculosus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig85contigEcto-sp6_S_contig85:347414..348047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig85.17670.1mRNA_Ecto-sp6_S_contig85.17670.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig85 347414..348047 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig85.17670.1 ID=prot_Ecto-sp6_S_contig85.17670.1|Name=mRNA_Ecto-sp6_S_contig85.17670.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=128bp
MITPCARVMAVATFATTRCGSFLYGGARFARTGAKQFAALHSSAQVEQTT
KDHESLSRGNADDASLDSVLISTNPDLVVDHMKARRMGEDSVEAVQRIGD
LMDTRRELIMTKEDALKQRNAMSAQAS*
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