prot_Ecto-sp6_S_contig84.17608.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig84.17608.1
Unique Nameprot_Ecto-sp6_S_contig84.17608.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length245
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17608.1 vs. uniprot
Match: D7FJN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJN7_ECTSI)

HSP 1 Score: 512 bits (1319), Expect = 5.570e-184
Identity = 240/244 (98.36%), Postives = 242/244 (99.18%), Query Frame = 0
Query:    1 MTAVTILAECWLKALLTLVALALSANVVVGPSVRWRPVFVSGLLVAIVICEYYYLFFAIAKVPTDWASRRGASIERWDCLQSTKGGKRADSSGSSFDVNPCFCPFGAFCKNLTSGEWVDPSVCPKDGTALCWDINHTPVNLYIKSTRDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEPEALYLNGTCY 244
            MTAVT LAECWLKALLTLVALALSANV+VGPSVRWRPVFVSGLLVAIVICEYYYLFFAI KVPTDWASRRGASIERWDCLQSTKGGKRADSSGSSFD+NPCFCPFGAFCKNLTSGEWVDPSVCPKDGTALCWDINHTPVNLYIKSTRDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEPEALYLNGTCY
Sbjct:    1 MTAVTTLAECWLKALLTLVALALSANVIVGPSVRWRPVFVSGLLVAIVICEYYYLFFAIVKVPTDWASRRGASIERWDCLQSTKGGKRADSSGSSFDINPCFCPFGAFCKNLTSGEWVDPSVCPKDGTALCWDINHTPVNLYIKSTRDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEPEALYLNGTCY 244          
BLAST of mRNA_Ecto-sp6_S_contig84.17608.1 vs. uniprot
Match: A0A836CP84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP84_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.130e-42
Identity = 81/206 (39.32%), Postives = 113/206 (54.85%), Query Frame = 0
Query:   41 SGLLVAIVICEYYYLFFAIAKVPTDWASRRGASIERWDCLQSTKGGKRADSSGSSFDVNPCFCP--FGAFCKNLTSGEWVDPSVCPKDGTALCWDINHTPVNLYIKSTRDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEP-EALYLNGTC 243
            + LL   ++ ++ +++ A  K P  W       + RWDCLQS KGGK+     +  +VNPC C   F A C +L +G     + C  DGT  C D +   +N  + + RDC+A QG  CS  +PC PC    L+ +  A G DA          RCR CG+ N+G C F  GEGPYCW  PGS EV+PC++CC++P E + +NG C
Sbjct:   12 TWLLPVSLLLQFNFVWQAAMKPPPTWERE----VFRWDCLQSPKGGKQWAGDDARDEVNPCLCAPHFKAACHSLETGA---AAACRTDGTVRCRDKSGVKINRLLSAERDCSAGQGRVCSQRSPCLPCEPSKLQQWALA-GLDA---------PRCRRCGSSNAGNCRFREGEGPYCWVRPGSNEVQPCALCCSDPSELINVNGVC 200          
BLAST of mRNA_Ecto-sp6_S_contig84.17608.1 vs. uniprot
Match: A0A7S2CU36_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CU36_9STRA)

HSP 1 Score: 121 bits (304), Expect = 7.270e-29
Identity = 81/242 (33.47%), Postives = 106/242 (43.80%), Query Frame = 0
Query:   30 GPSVRWRPVFVSGLLVAIVICEYYYLFF-AIAKVPTDWASRRGASIERWDCLQSTKGGKRADS---SGSSFDVNPCFCPFGAFCKNLTSGEWVD---PSVCPKDGTALCWD-----------------INHTPVNLYIKST-------RDCTAAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAGNSGACNFVIGEGPYCWKEP------GSREVEPCSVCCTEP 234
            G   +WR  F   LL+ +V+ +YY +F  A+   P D     G    RWDCLQSTKGGK + +    GS   +NPC+C   A CK  +  +  +   P  CP      C +                      V  YI          RDC   Q   C+   PC+PC L+ +  +               GV+RC +C   N+G CNFV G GPYCW+ P      GSR+V PC  CCTEP
Sbjct:  147 GVGSKWRSNFSGSLLLGMVVIQYYSVFMTAMQNYPYD-----GVEAYRWDCLQSTKGGKISRAMFYEGSERALNPCYCHANATCKYKSGVKEYNGSHPLGCPLTDEFTCLEQYAFQAFKTETXXXXXXXXXXKVWPYIAREALDEGFRRDCKKGQAARCTRQDPCSPCELEKVLAF---------------GVTRCETCSVFNNGDCNFVPGVGPYCWESPDYDERGGSRKVVPCKQCCTEP 368          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJN7_ECTSI5.570e-18498.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CP84_9STRA1.130e-4239.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CU36_9STRA7.270e-2933.47Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 38..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig84contigEcto-sp6_S_contig84:620550..630536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig84.17608.1mRNA_Ecto-sp6_S_contig84.17608.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig84 620497..631301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig84.17608.1 ID=prot_Ecto-sp6_S_contig84.17608.1|Name=mRNA_Ecto-sp6_S_contig84.17608.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=245bp
MTAVTILAECWLKALLTLVALALSANVVVGPSVRWRPVFVSGLLVAIVIC
EYYYLFFAIAKVPTDWASRRGASIERWDCLQSTKGGKRADSSGSSFDVNP
CFCPFGAFCKNLTSGEWVDPSVCPKDGTALCWDINHTPVNLYIKSTRDCT
AAQGPSCSLAAPCTPCGLDTLEGYIKASGGDANSNNATDGVSRCRSCGAG
NSGACNFVIGEGPYCWKEPGSREVEPCSVCCTEPEALYLNGTCY*
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