prot_Ecto-sp6_S_contig84.17564.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig84.17564.1
Unique Nameprot_Ecto-sp6_S_contig84.17564.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length701
Homology
[Close]
BLAST of mRNA_Ecto-sp6_S_contig84.17564.1 vs. uniprot
Match: D7FRI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI7_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 4.330e-88
Identity = 240/341 (70.38%), Postives = 245/341 (71.85%), Query Frame = 0 
Query:  360 ISEVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPYASWSVAGFGPNMTTDGDDNTVAASYWSCQAPPGTLSSSFDHDSCWLYFELNDEYTASYMMLYVHESNDASKEPIQFDVYACTIDAFSCYNGYANELVGSSTTVPGTPLGEGERVNLIRPLAVSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMNRDDSDDYXXXXXXXXXXXXXXXXXXXXXXNLVDDSLSSTATDEAGGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADDAADIEDFGNGALARGGVCSRQGLVGAVAVGAMFISFAANAM 700
            +S+VEIYVEVTQTEVFIPAAEAWNDVAADTITTVTP ASWSVAGFGPNMTT                                                                             YA+ELVGSSTTVPGTPLGEGERVNLIRPL VSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMN DDSD  XXXXXXXXXXXXXXXXXXXXXX         TATDEAGGVT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DADDAADI++FGNGALARGGVCSRQGLVG VAVGAMFISFAANAM
Sbjct:   45 LSQVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPSASWSVAGFGPNMTT-----------------------------------------------------------------------------YADELVGSSTTVPGTPLGEGERVNLIRPLTVSLGIHFNLSAGAIVSISEVELFVQTPDATPTPAPFVPTPETEAPVYSWMNGDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXTATDEAGGVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDADDAADIDNFGNGALARGGVCSRQGLVGVVAVGAMFISFAANAM 306
[Close]
BLAST of mRNA_Ecto-sp6_S_contig84.17564.1 vs. uniprot
Match: D7FRI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI8_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 1.070e-44
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0 
Query:  106 FHESDDATQLSISFDVEVEYDTVHTDLTSPGTALGAGQRVNLPPDTSGNYLHLLFDLTSDQTIDVSEVEIYLDVDDPDDVVVATLPTIST 195
            FHESDDATQLSISFDVEV YDTVHTDLTSPGTALGAGQRVN+PPD SGNYLHLLFDLTSDQ IDVSEVEIYLDVDDPDDVVVATLPTIST
Sbjct:   61 FHESDDATQLSISFDVEVGYDTVHTDLTSPGTALGAGQRVNMPPDASGNYLHLLFDLTSDQAIDVSEVEIYLDVDDPDDVVVATLPTIST 150
[Close]
BLAST of mRNA_Ecto-sp6_S_contig84.17564.1 vs. uniprot
Match: A0A6H5L2E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E1_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 7.490e-36
Identity = 92/176 (52.27%), Postives = 97/176 (55.11%), Query Frame = 0 
Query:   63 LTRDGEDNSVAESRWSCTLGTTTTCELQFEFDDYFDVSFLIIYF-------------------------------------------HESDDATQLSISFDVEVEYDTVHTDLTSPGTALGAGQRVNLPPDTSGNYLHLLFDLTSDQTIDVSEVEIYLDVDDPDDVVVATLPTIST 195
            LT+DG DNSVAESRWSCTLGT TTCELQ EFDD FDVS+L+I F                                           HESDDATQLS SFDV+V Y TVHTDLTSPGTALGAGQRV                            EIYLDVDDPD+VVVATLPTIST
Sbjct:    8 LTQDGADNSVAESRWSCTLGTATTCELQIEFDDCFDVSYLMISFKNTAGVGARPPTPCPVKTETVLRFAANETTRSVRLPSVDPLDFHESDDATQLSNSFDVQVGYGTVHTDLTSPGTALGAGQRV----------------------------EIYLDVDDPDNVVVATLPTIST 155
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRI7_ECTSI4.330e-8870.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRI8_ECTSI1.070e-4495.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2E1_9PHAE7.490e-3652.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 700..700
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..680
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 681..699
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.889
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 57..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig84contigEcto-sp6_S_contig84:108676..119220 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig84.17564.1mRNA_Ecto-sp6_S_contig84.17564.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig84 108676..119220 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig84.17564.1 ID=prot_Ecto-sp6_S_contig84.17564.1|Name=mRNA_Ecto-sp6_S_contig84.17564.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=701bp
MMSHGWMARLGMVALVLSMASRFASAEIVEAANVTNVGVDATAWDLRLGS
EGGCGLTGCDPRLTRDGEDNSVAESRWSCTLGTTTTCELQFEFDDYFDVS
FLIIYFHESDDATQLSISFDVEVEYDTVHTDLTSPGTALGAGQRVNLPPD
TSGNYLHLLFDLTSDQTIDVSEVEIYLDVDDPDDVVVATLPTISTVKVDT
VSNVVAAATFWDLRTDAGCGDAGCDPLLAHDGHNNTVASSRWSCESSLDV
DVENYVFFSSPQYCELQFVFGDEGDSVWDDGNLMFTVSHVVIYVHESDDA
TKEAMTMNVYSSYSGYDPAGSFVTVPGTPLGAGHRVNLNRPLATSLTVVP
VLSAGQWVDISEVEIYVEVTQTEVFIPAAEAWNDVAADTITTVTPYASWS
VAGFGPNMTTDGDDNTVAASYWSCQAPPGTLSSSFDHDSCWLYFELNDEY
TASYMMLYVHESNDASKEPIQFDVYACTIDAFSCYNGYANELVGSSTTVP
GTPLGEGERVNLIRPLAVSLGIHFNLSAGAIVSISEVELFVQTPDATPTP
APFVPTPETEAPVYSWMNRDDSDDYYMWANDDDDAAGVGGVVSSDDDNLV
DDSLSSTATDEAGGVTGGDDNLVDDSSSSTASDEAGGVTSGDDGRAIGLP
SSTADDADDAADIEDFGNGALARGGVCSRQGLVGAVAVGAMFISFAANAM
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf