prot_Ecto-sp6_S_contig84.17563.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig84.17563.1
Unique Nameprot_Ecto-sp6_S_contig84.17563.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length179
Homology
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BLAST of mRNA_Ecto-sp6_S_contig84.17563.1 vs. uniprot
Match: A0A6H5L022_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L022_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 2.110e-87
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0 
Query:    1 MNLLLHALLLSVLLCLRTCQAFVPLLKAPPASSQSALTRAPTRSATAEPAGKKSRGQSRDASTGLTRLGMMFGRGRTPPPTLSEEDLATMAKSREEANHKIDNFLEKRRAEREARKEAEQAEQREKVANRMKAKKEEAEHNKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIEDL 178
            MNLLLH LLLSVLLCLR CQAF PLLK  PASSQSAL RAPTRSAT  PAG +SRGQSRDA+T LTRLGMMFGRGR PPPTLSEEDLATMAKSREEAN KI+NFLEKRRA+R+ARKEAEQA  REKVANRMKA+KEEAEH+KVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDI DL
Sbjct:    1 MNLLLHTLLLSVLLCLRACQAFAPLLKTFPASSQSALARAPTRSATV-PAGSRSRGQSRDATTVLTRLGMMFGRGRNPPPTLSEEDLATMAKSREEANQKIENFLEKRRADRKARKEAEQAXXREKVANRMKAEKEEAEHSKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIGDL 177
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BLAST of mRNA_Ecto-sp6_S_contig84.17563.1 vs. uniprot
Match: D7FRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRI6_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 9.870e-46
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 
Query:   90 MAKSREEANHKIDNFLEKRRAEREARKEAEQAEQREKVANRMKAKKEEAEHNKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIEDL 178
            MAKSREEANHKIDNFLEKRRAEREARKEAEQAEQREKVANRMKAKKEEAEHNKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIEDL
Sbjct:    1 MAKSREEANHKIDNFLEKRRAEREARKEAEQAEQREKVANRMKAKKEEAEHNKVYIPQRLEEIEREQAVLKDRMSAFNTKIKDKDIEDL 89
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17563.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L022_9PHAE2.110e-8787.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRI6_ECTSI9.870e-46100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..169
NoneNo IPR availableCOILSCoilCoilcoord: 94..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.938

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig84contigEcto-sp6_S_contig84:90310..106404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig84.17563.1mRNA_Ecto-sp6_S_contig84.17563.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig84 90310..107022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig84.17563.1 ID=prot_Ecto-sp6_S_contig84.17563.1|Name=mRNA_Ecto-sp6_S_contig84.17563.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=179bp
MNLLLHALLLSVLLCLRTCQAFVPLLKAPPASSQSALTRAPTRSATAEPA
GKKSRGQSRDASTGLTRLGMMFGRGRTPPPTLSEEDLATMAKSREEANHK
IDNFLEKRRAEREARKEAEQAEQREKVANRMKAKKEEAEHNKVYIPQRLE
EIEREQAVLKDRMSAFNTKIKDKDIEDL*
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