prot_Ecto-sp6_S_contig84.17561.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig84.17561.1
Unique Nameprot_Ecto-sp6_S_contig84.17561.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length446
Homology
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: A0A6H5L263_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L263_9PHAE)

HSP 1 Score: 732 bits (1889), Expect = 4.590e-264
Identity = 395/447 (88.37%), Postives = 405/447 (90.60%), Query Frame = 0
Query:    1 MKSFGKQRQWGLLRVVLAMAVGSIDLGESVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQQNVYACSAISGPTSTTAVAAAAAVKEAAGGLDFGGATPPSRTRAHGGVSRGMPLAVSRQPLRGEILEAAFTTAXXXXXXXXR--EEDLPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTSXXXXXXXXXXXXXXXXXXXXXMQAARADGGERGDDGAGGDRLPLLSNSRGAPIGGGSIQDTSPV 445
            M S+GKQRQWGLLRVVLAMA+GSIDLG +VILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQ NVYACSAISGP STTAVA+A AV EAAG LDFGGA PPSRTRAH GVSRGMPLAVSRQP RGEILEA  TTA   XXXXX   EEDLPSAALISRSEKDDP+GCTFETKVLNAQ AGFSMVIVYDS++ENLFKMGR S+KG KHPKVEIPLVLV+ ASGLALKALI T SDTRGPEVYVDNTDPFGMFV VDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRV+EGS LEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTS     XXXXXXXX        MQ A ADG ERGDDGAGGDRLPLLSNSRGAPIGGGSIQDTSPV
Sbjct:    1 MTSYGKQRQWGLLRVVLAMAIGSIDLGAAVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGPLSTTAVASATAVNEAAGELDFGGAAPPSRTRAHSGVSRGMPLAVSRQPPRGEILEAVSTTAAATXXXXXAAGEEDLPSAALISRSEKDDPSGCTFETKVLNAQGAGFSMVIVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVSHASGLALKALIETASDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTSSSPSSXXXXXXXXAAVITAPAMQPAHADGVERGDDGAGGDRLPLLSNSRGAPIGGGSIQDTSPV 447          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: A0A835Z7P9_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P9_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.390e-48
Identity = 105/239 (43.93%), Postives = 141/239 (59.00%), Query Frame = 0
Query:  152 DLPSAALISRSEKD----DPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFG-MFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTN--RPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLT------------QRQRSCPMCKDPVT 371
            D+P  ALISRS +     DP  CTF  KV NA  AG ++ +V+D   E LF+M R +   V   K  IP VL++ +SG  L AL    +D  GP V+VD +DP+  MF  +++TM  +V GFL +LL C S+ + T HR LRRY+++       RP+SL + L++PE  V  G  LE DSC +CLEAYR+GDK+  L C H  HA C+ PWL             +RQR+CP+CK  VT
Sbjct:   82 DMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQRATGGPVDSAK--IPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVT 318          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: G3VTW2_SARHA (RING-type E3 ubiquitin transferase n=15 Tax=Metatheria TaxID=9263 RepID=G3VTW2_SARHA)

HSP 1 Score: 109 bits (272), Expect = 5.760e-23
Identity = 86/250 (34.40%), Postives = 126/250 (50.40%), Query Frame = 0
Query:  123 VSRQPLRGEILEAAFTTAXXXXXXXXREEDLPSA--ALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 370
            +S++ L+G ++EA    A              SA  AL+ R +      C F+ KVLNAQ AG+   +VY+     L  M   S +     ++ IP V V   S   L++L       R   V  DNT P G +    L  F  V G L+  L  G+++VV   ++ +R +      NR +S  ++ Q+P    ++G   E D C +CLE Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   49 LSQEGLQGFLVEAHPANACSPINPPPLAPANGSAFIALLRRFD------CNFDLKVLNAQKAGYRAAVVYNVNSNELLNMVWNSEEI--QQQIWIPSVFVGETSSEYLRSLFVYDKGARVLLV-PDNTFPLGYY----LIPFTGVVGLLV--LAMGAVLVVRCIQHRKRLQR-----NR-LSKEQLKQIPTHNYQKGD--EYDVCAICLEEYEDGDKLRILPCAHAYHSHCVDPWLTQTRKTCPICKQPV 275          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: UPI0004431BC1 (E3 ubiquitin-protein ligase RNF167 isoform X2 n=2 Tax=Monodelphis domestica TaxID=13616 RepID=UPI0004431BC1)

HSP 1 Score: 107 bits (268), Expect = 1.830e-22
Identity = 74/201 (36.82%), Postives = 107/201 (53.23%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 370
            C F+ KVLNAQ AG+   +VY+     L  M   S +     ++ IP V V   S   L++L       R   V  DNT P G +    L  F  + G L+  L  G+++VV   ++ +R +      NR +S  ++ Q+P    ++G   E D C +CLE Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   85 CNFDLKVLNAQRAGYRAAVVYNVNSNELLNMVWNSEEI--QQQIWIPSVFVGETSSEYLRSLFVYDKGARVLLV-PDNTFPLGYY----LIPFTGIVGLLV--LAMGAVLVVRCIQHRKRLQR-----NR-LSKEQLKQIPTHDYQKGD--EYDVCAICLEEYEDGDKLRVLPCAHAYHSHCVDPWLTQTRKTCPICKQPV 268          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: F7D206_MONDO (RING-type E3 ubiquitin transferase n=6 Tax=Metatheria TaxID=9263 RepID=F7D206_MONDO)

HSP 1 Score: 107 bits (268), Expect = 2.060e-22
Identity = 74/201 (36.82%), Postives = 107/201 (53.23%), Query Frame = 0
Query:  170 CTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 370
            C F+ KVLNAQ AG+   +VY+     L  M   S +     ++ IP V V   S   L++L       R   V  DNT P G +    L  F  + G L+  L  G+++VV   ++ +R +      NR +S  ++ Q+P    ++G   E D C +CLE Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   92 CNFDLKVLNAQRAGYRAAVVYNVNSNELLNMVWNSEEI--QQQIWIPSVFVGETSSEYLRSLFVYDKGARVLLV-PDNTFPLGYY----LIPFTGIVGLLV--LAMGAVLVVRCIQHRKRLQR-----NR-LSKEQLKQIPTHDYQKGD--EYDVCAICLEEYEDGDKLRVLPCAHAYHSHCVDPWLTQTRKTCPICKQPV 275          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: A0A8E0S1D5_9TREM (E3 ubiquitin-protein ligase RNF13 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0S1D5_9TREM)

HSP 1 Score: 108 bits (271), Expect = 2.130e-22
Identity = 78/226 (34.51%), Postives = 118/226 (52.21%), Query Frame = 0
Query:  149 REEDLPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFGMFVR-VDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLT 373
            R  DLP   LI R       GC F+ KV+NAQ A FS VIVY++    +F MG  S K      + IP V+V++ +G  LKA   + +D R  E  V     + + ++ V L++ +LV   L+ L+ C +  +  + R +RR           +S   + +L   R ++      ++CP+CLE ++  DK+R LPC HAFH  CI PWL + +R CP+C   V L+
Sbjct:   30 RLSDLPFIVLIERG------GCDFDLKVINAQKANFSGVIVYNTVPNEIFPMGGGSYKDG----ISIPAVMVSKMAGEKLKAF--SVAD-RQKEFVVSMVSFYSLPLKYVLLSLLVLVGVSLIILIVCFAAHLCNMWRRMRRGR---------LSRRHLRRLQTKRFEKARD-PYETCPICLEDFKDRDKIRILPCHHAFHTRCIDPWLLRNRRRCPVCNQTVELS 232          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: A0A504YCC1_FASGI (E3 ubiquitin-protein ligase RNF13 n=3 Tax=Fasciola TaxID=6191 RepID=A0A504YCC1_FASGI)

HSP 1 Score: 108 bits (271), Expect = 2.160e-22
Identity = 79/229 (34.50%), Postives = 119/229 (51.97%), Query Frame = 0
Query:  152 DLPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKAL-IATTSDTRGPEVYVDNTDPFGMFVR-VDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAP 378
            DLP  ALI R       GC F+ KVLNAQ A FS VIVY++    +F MG +S K      + IP V+V++ +G  LK   IA   +T      V     + + ++ V L++ +LV   L+ L+ C +  +  + R +RR           +S   + +L   R ++      ++CP+CLE Y+  +K+R LPC HAFH  CI PWL + +R CP+C   V L+   +P
Sbjct:   33 DLPYIALIERG------GCDFDLKVLNAQNANFSGVIVYNTVPNEIFPMGGRSYKD----SISIPAVMVSKMAGDKLKTFAIADRQNT----FVVSMVSFYSLPLKYVLLSLLVLVGVSLIILIVCFAAHLCNMWRRMRRGR---------LSRRHLRRLQTKRFEKARD-PYETCPICLEDYKDREKIRLLPCHHAFHTRCIDPWLLRNRRRCPVCNQTVELSGAPSP 237          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: UPI00186458B0 (E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI00186458B0)

HSP 1 Score: 107 bits (268), Expect = 5.080e-22
Identity = 76/217 (35.02%), Postives = 113/217 (52.07%), Query Frame = 0
Query:  157 ALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLT 373
            ALI R +      C F+ KVL+AQ AGFS  IVY+   + L  MG      V+   +EIP V  +  +   LKA +      RG   YV     F   +   L  F  V G ++ ++   +++++   +Y +R        NR +S  ++ ++P  + K+G   E D C +CL+ Y  GDKLR LPC HA+H  C+ PWLTQ +++CP+CK  VT T
Sbjct:   96 ALIQRYD------CNFDVKVLHAQQAGFSAAIVYNVHSDILLNMGFNDESIVQQ--IEIPSVFTSYTASQLLKAYVIPD---RG--AYVILRPEFSFPLSYYLIPFTGVVGIIILVMV--TVLIIRCVQYRKRMRR-----NR-LSREQLKKIPVHKFKKGD--EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTQTKKTCPVCKQRVTRT 289          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: UPI001BC95D53 (E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Vulpes lagopus TaxID=494514 RepID=UPI001BC95D53)

HSP 1 Score: 105 bits (263), Expect = 7.220e-22
Identity = 74/214 (34.58%), Postives = 109/214 (50.93%), Query Frame = 0
Query:  169 GCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDPFGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEG---DSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPP 379
            GC F+ KVLNAQ AGF   +V++   + L  M R  A+     ++ IP V V  +S   L+AL       +G +V +   D   + +   L  F  V G L+     G+ +VV   R+++    L     R     E L+    R+    H  G   D C +CL+AY +G++LR LPC HA+H+ C+ PWLTQ +R+CP+CK PV  + G   P
Sbjct:   56 GCDFDLKVLNAQRAGFGAAVVHNVHSDALLSMARGGAEA--QQQIAIPAVFVGESSAEYLRALFVYD---KGAQVLLVPDD--NLLLGYCLIPFTGVVGLLVV--ASGAGLVV---RFVQHQGQL----RRARLTREQLE----RIPTRDHQRGAPDDVCAICLDAYEVGERLRVLPCAHAYHSRCVDPWLTQARRTCPVCKQPVRRSPGAGGP 249          
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Match: A0A5J4NYZ5_9TREM (E3 ubiquitin-protein ligase RNF13 n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NYZ5_9TREM)

HSP 1 Score: 107 bits (267), Expect = 1.500e-21
Identity = 82/234 (35.04%), Postives = 111/234 (47.44%), Query Frame = 0
Query:  153 LPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKMGRKS------------AKGVKHPKVEIPLVLVTRASGLALKALIATTSDTR--GPEVYVDNTDPFGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTL 372
            +P  A+I R +      C F+ KV N Q AGFS  IVYD+  E +F MG +             A  +   K+EIP V+V R SG  LK    T S  R  G  V   N         V L++ +LV   LL L+ C +  +  L R   R      G      L +++    VR ++      ++CP+CLE Y+  DKLR LPC HAFH  CI PWL + +R CP+C   V +
Sbjct:   92 IPFIAIIERGD------CNFDLKVWNVQQAGFSGAIVYDTVDEKIFPMGGRDCTCNFLSLTSSLAFILDVEKIEIPAVMVDRISGYRLKTYSLTESKRRYLGSMVSFYNLP----LKYVLLSLLVLVGASLLVLIGCFAAHLCNLWRRAHR------GRLSQRHLRQLVTKRFVRDQDPF----ETCPICLEDYKERDKLRLLPCHHAFHTECIDPWLLRNRRRCPVCNQTVEI 305          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig84.17561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L263_9PHAE4.590e-26488.37RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z7P9_9STRA1.390e-4843.93RING-type domain-containing protein n=1 Tax=Tribon... [more]
G3VTW2_SARHA5.760e-2334.40RING-type E3 ubiquitin transferase n=15 Tax=Metath... [more]
UPI0004431BC11.830e-2236.82E3 ubiquitin-protein ligase RNF167 isoform X2 n=2 ... [more]
F7D206_MONDO2.060e-2236.82RING-type E3 ubiquitin transferase n=6 Tax=Metathe... [more]
A0A8E0S1D5_9TREM2.130e-2234.51E3 ubiquitin-protein ligase RNF13 n=1 Tax=Fasciolo... [more]
A0A504YCC1_FASGI2.160e-2234.50E3 ubiquitin-protein ligase RNF13 n=3 Tax=Fasciola... [more]
UPI00186458B05.080e-2235.02E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Me... [more]
UPI001BC95D537.220e-2234.58E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Vu... [more]
A0A5J4NYZ5_9TREM1.500e-2135.04E3 ubiquitin-protein ligase RNF13 n=1 Tax=Paragoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 325..366
e-value: 3.4E-9
score: 46.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 323..367
e-value: 7.6E-13
score: 48.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 325..367
score: 12.637
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 304..373
e-value: 5.6E-19
score: 69.1
IPR003137PA domainPFAMPF02225PAcoord: 154..228
e-value: 4.0E-8
score: 33.2
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 324..398
NoneNo IPR availablePANTHERPTHR22765:SF247RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 169..230
coord: 324..398
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 169..230
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..445
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..283
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.535
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 308..379
NoneNo IPR availableTMHMMTMhelixcoord: 259..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig84contigEcto-sp6_S_contig84:77897..83024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig84.17561.1mRNA_Ecto-sp6_S_contig84.17561.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig84 77873..84154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig84.17561.1 ID=prot_Ecto-sp6_S_contig84.17561.1|Name=mRNA_Ecto-sp6_S_contig84.17561.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=446bp
MKSFGKQRQWGLLRVVLAMAVGSIDLGESVILVYNEGTTRFDDVPSMDNF
GPRIPEEGFAGRLQLAQQNVYACSAISGPTSTTAVAAAAAVKEAAGGLDF
GGATPPSRTRAHGGVSRGMPLAVSRQPLRGEILEAAFTTAAATAAAAARE
EDLPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSQQENLFKM
GRKSAKGVKHPKVEIPLVLVTRASGLALKALIATTSDTRGPEVYVDNTDP
FGMFVRVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRP
MSLPEVLQLPEVRVKEGSHLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAG
CITPWLTQRQRSCPMCKDPVTLTVGLAPPTSSSPSSSSASSAAPAAVITP
PAMQAARADGGERGDDGAGGDRLPLLSNSRGAPIGGGSIQDTSPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR003137PA_domain