prot_Ecto-sp6_S_contig83.17500.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig83.17500.1
Unique Nameprot_Ecto-sp6_S_contig83.17500.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length561
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17500.1 vs. uniprot
Match: D7G2B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B7_ECTSI)

HSP 1 Score: 959 bits (2480), Expect = 0.000e+0
Identity = 475/501 (94.81%), Postives = 479/501 (95.61%), Query Frame = 0 
Query:   60 VRRTALVDSPDVVTYNVKVGTLYKTEVGVDYPVEIEVTTSASAADCGVYLQVGGEYLLDLYRYKGELRSVGACGATQSWTTLPADRIATLGDINSACDPCAACGESQDCLLYTDGDSTTTXXXVTGGGEEFYCADTCAAGVCGAEETCYLNESDCTGGPCPPVAECATPPTSPIDKCGGSCLDSEECLPYTAGVDQYYCSAVCDPSPCEGEGEECSVLPVYCAADSICRSGFACTRAGVVKKTFRAAIGEGGLCEGRCSEFQECLFYSGNFAEDQYYCSAVCDPSPCGDGEECTLVPASCAPGSICGKRSICSPLPAAATEVVATIKQEDPCDGRCGGFEECLFYTGDLAEDQHYCSAVCEPSPCEEGEQCHLTPDSCAAGSICGNGFLCAPAANATLQKEDPCAPCGEFQDCRVYANGAFAEYYCADVCDPSPCGGSKDKCSLVEQGDDCDAATSACPPLATCASATVAVXXXXXXXXXRVDPAEQTTKANSRLGSSSAN 560
            V RTALVD PDVVTYNVKVGTLYKTE GVDYPVEIEVTTSASAA CGVYLQVGGEYLLDLYRYKGELRSVGACGATQSWTTLPADRIATLGDINSACDPCAACGESQDCLLYTDGDSTTTXXXVTGGGEEFYCADTCAAGVCGAEETCYLNESDCTGGPCPPVAEC +PP       GGSCLDSEECLPYTAGVDQYYCSAVCDPSPCEGEGEECSVLPVYCAA+SICRSGFACTRAGVVKKTFRAAIGEGGLCEGRCSEFQECLFYSGNFAEDQYYCSAVCDPSPCGDGEECTLVPASCAPGSICGKRSICSPLPA ATEVVATIKQEDPCDGRCG FEECLFYTGDLAEDQHYCSAVCEPSPCEEGEQCHL P+SCAAGSICGNGFLCAPAANATLQ+ DPCAPCGEFQDCRVYANGAFAEYYCADVCDPSPCGGSKDKCSLVEQGDDCDAATSACPPLATCASATV  XXXXXXX  R DPAEQT KANSRLGSSSAN
Sbjct:   20 VGRTALVDRPDVVTYNVKVGTLYKTEAGVDYPVEIEVTTSASAAHCGVYLQVGGEYLLDLYRYKGELRSVGACGATQSWTTLPADRIATLGDINSACDPCAACGESQDCLLYTDGDSTTTXXXVTGGGEEFYCADTCAAGVCGAEETCYLNESDCTGGPCPPVAECGSPPXXXXXXXGGSCLDSEECLPYTAGVDQYYCSAVCDPSPCEGEGEECSVLPVYCAANSICRSGFACTRAGVVKKTFRAAIGEGGLCEGRCSEFQECLFYSGNFAEDQYYCSAVCDPSPCGDGEECTLVPASCAPGSICGKRSICSPLPA-ATEVVATIKQEDPCDGRCGDFEECLFYTGDLAEDQHYCSAVCEPSPCEEGEQCHLMPESCAAGSICGNGFLCAPAANATLQEGDPCAPCGEFQDCRVYANGAFAEYYCADVCDPSPCGGSKDKCSLVEQGDDCDAATSACPPLATCASATVTXXXXXXXX--RADPAEQTPKANSRLGSSSAN 517
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BLAST of mRNA_Ecto-sp6_S_contig83.17500.1 vs. uniprot
Match: A0A6H5JAS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS0_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 4.400e-115
Identity = 169/183 (92.35%), Postives = 171/183 (93.44%), Query Frame = 0 
Query:   62 RTALVDSPDVVTYNVKVGTLYKTEVGVDYPVEIEVTTSASAADCGVYLQVGGEYLLDLYRYKGELRSVGACGATQSWTTLPADRIATLGDINSACDPCAACGESQDCLLYTDGDSTTTXXXVTGGGEEFYCADTCAAGVCGAEETCYLNESDCTGGPCPPVAECATPPTSPIDKCGGSCLDSE 244
            RT LVD PD VTYNVKVGTLYKTEVGVDYPVEIEVTTSASAADCGVYLQVGGEYLLDLYRYKGELRSVGACGATQSWTTLPADRIATLGDIN AC PCAACGESQDCLLYTDGDSTTT   VTGGG+EFYCADTCAAGVCGAEETCYLNE+ CT GPCPPVAEC TPP SPIDKCGGSCLDSE
Sbjct:   34 RTVLVDRPDFVTYNVKVGTLYKTEVGVDYPVEIEVTTSASAADCGVYLQVGGEYLLDLYRYKGELRSVGACGATQSWTTLPADRIATLGDINRACHPCAACGESQDCLLYTDGDSTTTSSSVTGGGKEFYCADTCAAGVCGAEETCYLNEAHCTEGPCPPVAECGTPPASPIDKCGGSCLDSE 216
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BLAST of mRNA_Ecto-sp6_S_contig83.17500.1 vs. uniprot
Match: A0A6H5J6I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6I6_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 5.600e-91
Identity = 133/151 (88.08%), Postives = 138/151 (91.39%), Query Frame = 0 
Query:  399 EECLFYTGDLAEDQHYCSAVCEPSPCEEGEQCHLTPDSCAAGSICGNGFLCAPAANATLQKEDPCAPCGEFQDCRVYANGAFAEYYCADVCDPSPCGGSKDKCSLVEQGDDCDAATSACPPLATCASATVAVXXXXXXXXXRVDPAEQTTK 549
            +ECLFYTGDLAEDQHYCSAVC+PSPCEEGEQCHLTP+SCAAGSICGNGFLCAPAANATLQ+EDPCAPCGEFQDCRVYANGAFAEYYCADVCDPSPC GSKDKCSLVEQGDDCDAATSACPPLATCASA VA          R DPAEQTT+
Sbjct:    3 QECLFYTGDLAEDQHYCSAVCDPSPCEEGEQCHLTPESCAAGSICGNGFLCAPAANATLQEEDPCAPCGEFQDCRVYANGAFAEYYCADVCDPSPCEGSKDKCSLVEQGDDCDAATSACPPLATCASAAVAAAEEE-----RADPAEQTTE 148
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BLAST of mRNA_Ecto-sp6_S_contig83.17500.1 vs. uniprot
Match: D7FR36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR36_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.680e-8
Identity = 26/59 (44.07%), Postives = 35/59 (59.32%), Query Frame = 0 
Query:  313 CEGRCSEFQECLFYSGNFAEDQYYCSAVCDPSPCGDGEECTLVPASCAPGSICGKRSIC 371
            C G C EFQ C     ++++  Y+CS  CDPSPC +GEECTL    C+   +CG  + C
Sbjct:   51 CNGECGEFQVCSRSYFSYSDASYFCSDTCDPSPCSEGEECTLTYPVCSASEVCGPVADC 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2B7_ECTSI0.000e+094.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAS0_9PHAE4.400e-11592.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6I6_9PHAE5.600e-9188.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR36_ECTSI1.680e-844.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.120coord: 37..156
e-value: 2.3E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR11844:SF25TISSUE INHIBITOR OF METALLOPROTEINASEcoord: 25..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..560
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..36
score: 0.555
NoneNo IPR availableTMHMMTMhelixcoord: 9..31
IPR001820Protease inhibitor I35 (TIMP)PANTHERPTHR11844METALLOPROTEASE INHIBITORcoord: 25..201
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 37..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:190300..198996 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17500.1mRNA_Ecto-sp6_S_contig83.17500.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig83 190300..198996 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig83.17500.1 ID=prot_Ecto-sp6_S_contig83.17500.1|Name=mRNA_Ecto-sp6_S_contig83.17500.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=561bp
MVLFRNTNVFGAAAAAAAAAAFSSVALLLLAPAAQACRCDFRSLCENIGF
ASVVLRGHVVRRTALVDSPDVVTYNVKVGTLYKTEVGVDYPVEIEVTTSA
SAADCGVYLQVGGEYLLDLYRYKGELRSVGACGATQSWTTLPADRIATLG
DINSACDPCAACGESQDCLLYTDGDSTTTSSSVTGGGEEFYCADTCAAGV
CGAEETCYLNESDCTGGPCPPVAECATPPTSPIDKCGGSCLDSEECLPYT
AGVDQYYCSAVCDPSPCEGEGEECSVLPVYCAADSICRSGFACTRAGVVK
KTFRAAIGEGGLCEGRCSEFQECLFYSGNFAEDQYYCSAVCDPSPCGDGE
ECTLVPASCAPGSICGKRSICSPLPAAATEVVATIKQEDPCDGRCGGFEE
CLFYTGDLAEDQHYCSAVCEPSPCEEGEQCHLTPDSCAAGSICGNGFLCA
PAANATLQKEDPCAPCGEFQDCRVYANGAFAEYYCADVCDPSPCGGSKDK
CSLVEQGDDCDAATSACPPLATCASATVAVEEEEEEEEERVDPAEQTTKA
NSRLGSSSAN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001820TIMP
IPR008993TIMP-like_OB-fold