prot_Ecto-sp6_S_contig83.17499.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig83.17499.1
Unique Nameprot_Ecto-sp6_S_contig83.17499.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length321
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17499.1 vs. uniprot
Match: D7G2B8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B8_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 5.200e-125
Identity = 179/191 (93.72%), Postives = 184/191 (96.34%), Query Frame = 0 
Query:  130 MFWGMFYINFENWTIPVIIQHIRRLRLAYTKDCMGVIVTQEHDCDAYLSDMDQGERTLDFSQSMVPAYHAIGALYMLLSLAGWRAGYTNNTTLAKVFMLGFPVTFSIDVCHSFLSPNDEGPLSTLRAALFSAYFFKVSWSFYRRLRISEEAQRIVAERGLEGGRRGVLDRRSSAAAGTGDPTGVQLGTMIA 320
            MFWGM YINFENWTIPVIIQH+RRLR AYTKDCMGVIVTQEHDCDAYLS MDQGERTLDFSQSMVPAYHAIGALYMLLSLAGWRAGYTNNTTLAK+FMLGFPVTFSID+CHSFLSPNDEGPL+TL AALFSAYFFKV+WSFYRRLRISEEAQRIVAE GLEGGRRGVLD RSSAAAGTGDPTGVQL TMIA
Sbjct:    1 MFWGMVYINFENWTIPVIIQHLRRLRSAYTKDCMGVIVTQEHDCDAYLSAMDQGERTLDFSQSMVPAYHAIGALYMLLSLAGWRAGYTNNTTLAKLFMLGFPVTFSIDLCHSFLSPNDEGPLNTLLAALFSAYFFKVAWSFYRRLRISEEAQRIVAEGGLEGGRRGVLDGRSSAAAGTGDPTGVQLSTMIA 191
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BLAST of mRNA_Ecto-sp6_S_contig83.17499.1 vs. uniprot
Match: D8LNW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNW7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.210e-13
Identity = 61/215 (28.37%), Postives = 98/215 (45.58%), Query Frame = 0 
Query:   77 QQQWPVDVGRWAPEEERALGMTRTAWWWQAGPVASCCGCFTIRTGIYLLSLWNMF----WGMFYINFENWTIPVIIQHIRRLRLAYTKDCMGVIVTQEHDCDAYLSDMDQGERTLDFSQSMVPAYHAIGALYMLLSLAGWRAGYTNNTTLAKV--------FMLGFPVTFSID-VCHSFLSPNDEGP---LSTLRAALFSAYFFKVSWSFYRRLR 275
            +Q+ PVD  R+  E     G  R  WWWQ GPV SCC C ++R G+ +L+  ++F    W  FY         ++   I  L+  Y KDC    V Q  DC     +++Q E  ++   ++    +    + ML    G  A + +N   AK+        F +G    +++  V   +   N +GP   +  L   +   YF KV+WSF++RL+
Sbjct:    9 EQEEPVDGARFNGE-----GGVRRQWWWQPGPVDSCCFCCSLRAGVGILAANDLFLNGIWSTFYSRSH--IEKMLHAAIEILQSVYDKDCKDAPV-QTEDCLQLSHNIEQAEFEVELFDNLPVIVYVEAIIAMLAGAVGLFAVFKSNALSAKIYLWMWLPRFFVGLVAKYTLRAVMKQYGIDNSDGPGVVIGHLVDVVVFLYFVKVAWSFHQRLK 215
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2B8_ECTSI5.200e-12593.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNW7_ECTSI1.210e-1328.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 244..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 214..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 269..320
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:182559..186880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17499.1mRNA_Ecto-sp6_S_contig83.17499.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig83 181241..188027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig83.17499.1 ID=prot_Ecto-sp6_S_contig83.17499.1|Name=mRNA_Ecto-sp6_S_contig83.17499.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=321bp
MLQAALLSSLEVYTPDGEVLRSFLPRTAAVSAREESPHTQLCNFFSVNTC
IHPCVIAGVLYERRSPTPVNQRMATPQQQWPVDVGRWAPEEERALGMTRT
AWWWQAGPVASCCGCFTIRTGIYLLSLWNMFWGMFYINFENWTIPVIIQH
IRRLRLAYTKDCMGVIVTQEHDCDAYLSDMDQGERTLDFSQSMVPAYHAI
GALYMLLSLAGWRAGYTNNTTLAKVFMLGFPVTFSIDVCHSFLSPNDEGP
LSTLRAALFSAYFFKVSWSFYRRLRISEEAQRIVAERGLEGGRRGVLDRR
SSAAAGTGDPTGVQLGTMIA*
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