prot_Ecto-sp6_S_contig83.17492.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig83.17492.1
Unique Nameprot_Ecto-sp6_S_contig83.17492.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length165
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..159
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..106
NoneNo IPR availableTMHMMTMhelixcoord: 126..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:143586..144119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17492.1mRNA_Ecto-sp6_S_contig83.17492.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig83 143276..144137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig83.17492.1 ID=prot_Ecto-sp6_S_contig83.17492.1|Name=mRNA_Ecto-sp6_S_contig83.17492.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=165bp
MDKGCVAHEGPRYLHGRDDGGLSYPSRDEEAEQTTLTTRATGGRVVSAGT
PNRTNTRLVFVELEFSARTLETGRGVCCRQRQLPLGFEHVWALFSRAWCP
LLFYFVHDKWCGRKGGLITMSKKPSLFAFVCLVSVIFTPVVALCVCACCF
LLSCFFFFFLASFS*
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