prot_Ecto-sp6_S_contig83.17487.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig83.17487.1
Unique Nameprot_Ecto-sp6_S_contig83.17487.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length129
Homology
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: D7G2C5_ECTSI (Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C5_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 2.440e-85
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI
Sbjct:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A835Z1Z7_9STRA (Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z7_9STRA)

HSP 1 Score: 226 bits (575), Expect = 2.260e-74
Identity = 112/125 (89.60%), Postives = 119/125 (95.20%), Query Frame = 0
Query:    4 DGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            D +NPKAYPL G DLTVTILDL+QQA+NYKQLKKGANEATKTLNRGISEFIVMAADA+PLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPV++ SVTTNEASQLK QI +LKDQIEQLLI
Sbjct:    3 DEINPKAYPLAGADLTVTILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADADPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISASVTTNEASQLKEQIQSLKDQIEQLLI 127          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: L1I7R9_GUITC (Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 RepID=L1I7R9_GUITC)

HSP 1 Score: 218 bits (555), Expect = 2.450e-71
Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0
Query:    6 VNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            VNPKA+PL  PDL+VTIL+L+QQASNYKQLKKGANEATKTLNRGISEFIVMAAD EPLEILLHLPLLCEDKNVPYVFVPSK ALGRACGVSRPV+A SVTTNE SQLK QI TLKDQIE+LLI
Sbjct:    4 VNPKAFPLAPPDLSVTILELVQQASNYKQLKKGANEATKTLNRGISEFIVMAADTEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRPVIAASVTTNEGSQLKGQIQTLKDQIEKLLI 126          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A7S2FW40_9STRA (Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2FW40_9STRA)

HSP 1 Score: 218 bits (554), Expect = 3.480e-71
Identity = 109/128 (85.16%), Postives = 118/128 (92.19%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            MAE  VNPKAYPL   ++TV ILDL+QQA NYKQLKKGANEATKTLNRGISEF+V+AADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPV++CSVT+NEASQLK QI T+KD IEQLLI
Sbjct:    1 MAE--VNPKAYPLADAEMTVKILDLVQQACNYKQLKKGANEATKTLNRGISEFVVLAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVISCSVTSNEASQLKDQIQTMKDNIEQLLI 126          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A7S2XVU5_9STRA (Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVU5_9STRA)

HSP 1 Score: 218 bits (554), Expect = 4.240e-71
Identity = 109/126 (86.51%), Postives = 114/126 (90.48%), Query Frame = 0
Query:    3 EDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            E   NPKAYPL GP+LTV+I DL QQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSK+ALGRACGVSRPV+A S+TTNEASQLK QI   KD IEQLLI
Sbjct:    7 ELATNPKAYPLAGPELTVSIYDLTQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKIALGRACGVSRPVIAASITTNEASQLKEQIQRTKDAIEQLLI 132          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A7S1CD40_9STRA (Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CD40_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.180e-70
Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 0
Query:    3 EDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            +DGVNPKA+PL   +L V ILDLIQQASNYKQLKKGANEATKTLNRGISE IV+ ADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPV+ACS+TTNE SQLK QI T+KD IE+LLI
Sbjct:    6 KDGVNPKAFPLADAELVVKILDLIQQASNYKQLKKGANEATKTLNRGISELIVLTADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVIACSITTNEGSQLKPQINTMKDAIERLLI 131          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A022QHN0_ERYGU (Ribonucloprotein n=6 Tax=Mesangiospermae TaxID=1437183 RepID=A0A022QHN0_ERYGU)

HSP 1 Score: 215 bits (548), Expect = 3.050e-70
Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            M  D VNPKAYPL    LT+TILDL+QQ +NYKQLKKGANEATKTLNRGISEF+VMAADAEPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPV+ACSVTTNE SQL++QI+ LKD IE+LLI
Sbjct:    1 MTADAVNPKAYPLADAQLTITILDLVQQGANYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLRAQILQLKDAIEKLLI 128          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A7J7GND5_CAMSI (Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GND5_CAMSI)

HSP 1 Score: 214 bits (545), Expect = 8.750e-70
Identity = 106/128 (82.81%), Postives = 115/128 (89.84%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            M  + VNPKAYPL    LT+TILDL+QQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPV+ACSVT+NEASQLKSQI  LKD IE+LLI
Sbjct:    1 MTAEAVNPKAYPLADSQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A804K312_MUSAM (Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A804K312_MUSAM)

HSP 1 Score: 213 bits (543), Expect = 1.770e-69
Identity = 106/128 (82.81%), Postives = 115/128 (89.84%), Query Frame = 0
Query:    1 MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            M+ + VNPKAYPL    LT+TILDLIQQA+NYKQLKKGANEATKTLNRGISEF+VMAAD EPLEILLHLPLL EDKNVPYVFVPSK ALGRACGV+RPV+ACSVT+NE SQLKSQI  LKD IE+LLI
Sbjct:    1 MSTEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKDAIEKLLI 128          
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Match: A0A5J4Z9E3_PORPP (Ribonucloprotein n=2 Tax=Porphyridiaceae TaxID=2799 RepID=A0A5J4Z9E3_PORPP)

HSP 1 Score: 212 bits (540), Expect = 4.590e-69
Identity = 105/123 (85.37%), Postives = 115/123 (93.50%), Query Frame = 0
Query:    6 VNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVVACSVTTNEASQLKSQIITLKDQIEQLLI 128
            VNPKA+PL    LTV+ILDL+QQA+NYKQL+KGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSK ALGRACGVSR V+ACSVT+NE SQLKSQI+ L+DQIE+LLI
Sbjct:    3 VNPKAFPLAEQQLTVSILDLVQQAANYKQLRKGANEATKTLNRGISEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKQALGRACGVSRHVIACSVTSNEGSQLKSQILNLRDQIEKLLI 125          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17487.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2C5_ECTSI2.440e-85100.00Ribonucloprotein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A835Z1Z7_9STRA2.260e-7489.60Ribonucloprotein n=1 Tax=Tribonema minus TaxID=303... [more]
L1I7R9_GUITC2.450e-7188.62Ribonucloprotein n=6 Tax=Cryptophyceae TaxID=3027 ... [more]
A0A7S2FW40_9STRA3.480e-7185.16Ribonucloprotein n=3 Tax=Ochrophyta TaxID=2696291 ... [more]
A0A7S2XVU5_9STRA4.240e-7186.51Ribonucloprotein n=1 Tax=Fibrocapsa japonica TaxID... [more]
A0A7S1CD40_9STRA1.180e-7084.92Ribonucloprotein n=1 Tax=Bicosoecida sp. CB-2014 T... [more]
A0A022QHN0_ERYGU3.050e-7082.03Ribonucloprotein n=6 Tax=Mesangiospermae TaxID=143... [more]
A0A7J7GND5_CAMSI8.750e-7082.81Ribonucloprotein n=2 Tax=Camellia sinensis TaxID=4... [more]
A0A804K312_MUSAM1.770e-6982.81Ribonucloprotein n=2 Tax=Musa TaxID=4640 RepID=A0A... [more]
A0A5J4Z9E3_PORPP4.590e-6985.37Ribonucloprotein n=2 Tax=Porphyridiaceae TaxID=279... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..128
NoneNo IPR availablePANTHERPTHR23105:SF117coord: 1..128
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 1..128
IPR018492Ribosomal protein L7Ae/L8/Nhp2 familyPRINTSPR00881L7ARS6FAMILYcoord: 80..94
score: 50.61
coord: 35..49
score: 47.88
coord: 54..67
score: 44.48
coord: 70..80
score: 66.53
IPR002415H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryotePRINTSPR00883NUCLEARHMGcoord: 8..21
score: 47.14
coord: 38..48
score: 87.27
coord: 82..94
score: 81.54
coord: 21..36
score: 60.0
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..128
e-value: 1.9E-51
score: 175.0
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 6..126
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 23..111
e-value: 4.1E-27
score: 93.7
IPR004037Ribosomal protein L7Ae conserved sitePROSITEPS01082RIBOSOMAL_L7AEcoord: 73..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:91935..93813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17487.1mRNA_Ecto-sp6_S_contig83.17487.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig83 91935..93813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig83.17487.1 ID=prot_Ecto-sp6_S_contig83.17487.1|Name=mRNA_Ecto-sp6_S_contig83.17487.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=129bp
MAEDGVNPKAYPLTGPDLTVTILDLIQQASNYKQLKKGANEATKTLNRGI
SEFIVMAADAEPLEILLHLPLLCEDKNVPYVFVPSKVALGRACGVSRPVV
ACSVTTNEASQLKSQIITLKDQIEQLLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018492Ribosomal_L7Ae/L8/Nhp2
IPR002415H/ACA_rnp_Nhp2_euk
IPR029064L30e-like
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR004037Ribosomal_L7Ae_CS