prot_Ecto-sp6_S_contig83.17482.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig83.17482.1
Unique Nameprot_Ecto-sp6_S_contig83.17482.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length371
Homology
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BLAST of mRNA_Ecto-sp6_S_contig83.17482.1 vs. uniprot
Match: A0A6H5K8X9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X9_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 1.280e-129
Identity = 280/347 (80.69%), Postives = 281/347 (80.98%), Query Frame = 0 
Query:    1 MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSXXXXXXXXXXXXSFVVRQNQERLLFLQQHEASTLAQGTAAAPATIADGNFVVESIVRSQRSLNEITIHEGQQFIGQESNEAATAVPQQQSFAARVQYSEXXXXXXXXXXPLSLFGGAVIGSLFEDGGDSSDYFCGVDSSDEADEDRTVIAASAAAECATSTTCDSGRGXXXXXXXXXXXXXXXXXXXXXXDSSSSSCXXXXXXXXXXXXXXXXXXIGGVGAERYAFEGDDDGIIGTAADPLVDFDTAAAAGLSFSLPAAHHWGXXXXXXXXXXX--QPLVAATGPHAGGSWQPAAAGAPR-EVGVRGGLLGRG 344
            MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSS            S  VRQNQERLLFLQQH ASTLAQGTAAAPATIADG FVVESIVRSQRSLNEITIHEGQQFIGQESNEAATAVPQQQS AA      XXXXXXXXX PLSLFGGAVIGSLFEDGGDSSDYFCGVDSSDEADED TVIAASAAAECA STTCDS   XXXXXXXXXXXXXXXXXXXXXX SSSSSC                  IGG GAERYAFEGDDD IIG AADP VD DTAAAAGLSFSLPAAH   XXXXXXXXXXX  QPLVAATGPHAGGSWQPAAAGAPR  V + GG    G
Sbjct:    1 MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSSSISSSSSF---SLSVRQNQERLLFLQQHAASTLAQGTAAAPATIADGAFVVESIVRSQRSLNEITIHEGQQFIGQESNEAATAVPQQQSLAAXXXXXXXXXXXXXXX-PLSLFGGAVIGSLFEDGGDSSDYFCGVDSSDEADEDSTVIAASAAAECAISTTCDSXXXXXXXXXXXXXXXXXXXXXXXXXXSSSSSCSSASGSGA----------IGGFGAERYAFEGDDDSIIGIAADPFVDLDTAAAAGLSFSLPAAHXXXXXXXXXXXXXXPPQPLVAATGPHAGGSWQPAAAGAPRVSVRISGGXXXXG 333
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BLAST of mRNA_Ecto-sp6_S_contig83.17482.1 vs. uniprot
Match: D7G3W2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W2_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 5.610e-6
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 0 
Query:  170 VDSSDEADEDRTVIAASAAAECATSTTCDSGRG 202
            VDSSDEADED TV+AASAAAECA STTCDS RG
Sbjct:    9 VDSSDEADEDSTVMAASAAAECAISTTCDSSRG 41
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig83.17482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K8X9_9PHAE1.280e-12980.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3W2_ECTSI5.610e-687.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig83contigEcto-sp6_S_contig83:5197..12413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig83.17482.1mRNA_Ecto-sp6_S_contig83.17482.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig83 5117..12413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig83.17482.1 ID=prot_Ecto-sp6_S_contig83.17482.1|Name=mRNA_Ecto-sp6_S_contig83.17482.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=371bp
MKRSRTCLNLFELDTPAAPKRTCSLPSNLGSFSSSSSSSSCGSSGSSFVV
RQNQERLLFLQQHEASTLAQGTAAAPATIADGNFVVESIVRSQRSLNEIT
IHEGQQFIGQESNEAATAVPQQQSFAARVQYSEQQQQQQQQQQPLSLFGG
AVIGSLFEDGGDSSDYFCGVDSSDEADEDRTVIAASAAAECATSTTCDSG
RGAECARQVSDADDNNASCARQVSDSSSSSCSSISNGSSGSSGSSGSGVI
GGVGAERYAFEGDDDGIIGTAADPLVDFDTAAAAGLSFSLPAAHHWGGRG
GGGVVVPPQPLVAATGPHAGGSWQPAAAGAPREVGVRGGLLGRGRVCFPL
SVVRRAVMKPTQQAKSAPSQ*
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