prot_Ecto-sp6_S_contig82.17435.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp6_S_contig82.17435.1
Unique Name	prot_Ecto-sp6_S_contig82.17435.1
Type	polypeptide
Organism	Ectocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length	138

Homology

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: A0A6H5K5G8_9PHAE (Rad60-SLD_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G8_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 1.040e-88
Identity = 130/137 (94.89%), Postives = 132/137 (96.35%), Query Frame = 0

Query:    1 MASTGGATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKNIQVPQSDGGHAAKQNPGGSRRNRGCCTVS 137
            MAST GATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMG+WPTGVEPVQDLSHVRL+CMGFGILPDAKSLTECRVPHFD HPTPVNVAIRPKNIQVP SDGG AAKQNP GSRRNRGCCTVS
Sbjct:    1 MASTAGATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGQWPTGVEPVQDLSHVRLICMGFGILPDAKSLTECRVPHFDAHPTPVNVAIRPKNIQVPPSDGGQAAKQNPRGSRRNRGCCTVS 137

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: D7G185_ECTSI (Rad60-SLD_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G185_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 1.840e-73
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0

Query:    1 MASTGGATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKNIQVPQS 114
            MAST GATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFD HPTPVNVAIRPKNIQVPQS
Sbjct:    1 MASTAGATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDAHPTPVNVAIRPKNIQVPQS 114

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: G4YNG2_PHYSP (Rad60-SLD_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YNG2_PHYSP)

HSP 1 Score: 102 bits (253), Expect = 2.850e-25
Identity = 57/112 (50.89%), Postives = 70/112 (62.50%), Query Frame = 0

Query:   10 LGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAI-RPKNIQVPQSDGGHAA 120
            +G+  G+  A LRLKF+FAN DGV VE      T V  +K  LM  WP  V P +D   VRL+CMG GIL D+ +L E  VP FDTHPTPVNV++ R     V ++ GGHAA
Sbjct:    1 MGSKGGSTAAELRLKFLFANQDGVRVEMGFPRATTVAQVKEQLMRSWPQNVPPAEDAKSVRLICMGRGILQDSHTL-ESAVPAFDTHPTPVNVSVYRKSQTAVREATGGHAA 111

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: A0A1V9ZD72_9STRA (Rad60-SLD_2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD72_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.770e-24
Identity = 51/120 (42.50%), Postives = 70/120 (58.33%), Query Frame = 0

Query:   21 LRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKNIQVPQ---SDGGHA----AKQNPGGSRRNRGC 133
            +++KF+FANHDGV V     P   V D+K  L+  WP  V   + +S++R +CMG G L D K+L EC+VP F THPTPVNV++ P    V Q   S+GG      +  +  G RR+  C
Sbjct:    6 IQIKFLFANHDGVKVLLNVFPDRKVGDVKGTLLSMWPEDVPRPESISNIRFICMGLGALQDGKTLRECKVPSFPTHPTPVNVSVTPSKHPVQQHTQSEGGRTYSTPSPSSNHGDRRHPNC 125

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: A0A2D4BX48_PYTIN (Rad60-SLD_2 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX48_PYTIN)

HSP 1 Score: 98.2 bits (243), Expect = 1.600e-23
Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 0

Query:   15 GAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKN-----IQVPQSDGGHAAKQNPGG 126
            G+ G  L LKF+FAN DG  V      +T V  +K+ LM  WPT V P QD + +RL+CMG G+L DA++L  C++P FDTHPTPVNV++  ++     +    + G   + Q  GG
Sbjct:    8 GSSGDELALKFLFANQDGKQVVLRFPKSTAVAAVKLELMRHWPTDVAPTQDPTTIRLICMGRGMLQDAQTLEACKIPAFDTHPTPVNVSVLRRSSTTNSVSTRTASGARPSHQTTGG 124

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: A0A1V9ZGX4_9STRA (Rad60-SLD_2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGX4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.710e-23
Identity = 51/118 (43.22%), Postives = 67/118 (56.78%), Query Frame = 0

Query:   21 LRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKNIQVPQSDGGHAAKQNPGGSRRNRGC-CTVS 137
            ++LKF+FAN DGV V      +T V  +K  L+  WP  V   +  + +RL+CMG G LPDAKSL +C+VP F THPTPVNV++ P   + P+S  G            N  C C VS
Sbjct:    6 VQLKFLFANKDGVKVALTAPRSTTVATIKAQLLAAWPADVPKPECTTSIRLICMGLGALPDAKSLADCKVPSFPTHPTPVNVSVVPPK-KAPESGAGSDHPLTNSAPPTNISCWCVVS 122

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: A0A7S2YH56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YH56_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.520e-22
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 0

Query:   21 LRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFG-ILPDAKSLTECRVPHFDTHPTPVNVAIRPK 107
            + L+F+FAN DG+ V  E  P+  V ++K ALM  WP G+ P     H+RL+CMG G ++P++++L EC +P F THPTP+NV +RP+
Sbjct:   76 ITLRFLFANRDGLTVTIECNPSDTVGEVKGALMSVWPEGLPPCSGGDHLRLICMGKGYLMPESRTLEECEIPVFKTHPTPINVTVRPE 163

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: H3GTH8_PHYRM (Rad60-SLD_2 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTH8_PHYRM)

HSP 1 Score: 94.4 bits (233), Expect = 3.080e-22
Identity = 49/101 (48.51%), Postives = 62/101 (61.39%), Query Frame = 0

Query:   21 LRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKNIQ-VPQSDGGHAA 120
            LRL+F+FAN DGV VE        V  +K  LM  WP  V P +D   VRL+CMG GIL D+ +L    VP FDTHPTPVNV++  ++ Q V ++  GH A
Sbjct:   12 LRLRFLFANQDGVHVEMGFPKEATVAQVKAQLMHSWPQNVPPAEDAKSVRLICMGRGILQDSHTLVSAGVPAFDTHPTPVNVSVFHRSQQAVREATRGHGA 112

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: A0A2P4YRR0_9STRA (Rad60-SLD_2 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRR0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.240e-22
Identity = 50/102 (49.02%), Postives = 63/102 (61.76%), Query Frame = 0

Query:   10 LGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKNIQV 111
            +G+ AG+    LRLKF+FAN DGV V      T  V + K  LMG WP  V P +D   VRL+CMG GIL D+ +L    +P FDTHPTPVNV++  K+ Q 
Sbjct:    1 MGSKAGSTEHELRLKFLFANQDGVHVVLSFPKTATVAEAKTQLMGTWPQNVPPAEDAKAVRLICMGRGILQDSHTLGSA-IPAFDTHPTPVNVSVFHKSQQT 101

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BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Match: A0A3F2RU18_9STRA (Rad60-SLD_2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU18_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.680e-22
Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 0

Query:   21 LRLKFIFANHDGVVVEFETEPTTLVKDLKVALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPVNVAIRPKNI 109
            LRLKF+FANHDG  VE      T V+ +K  LM  WP  V P ++   VRL+CMG GIL D+ +L    VP F+THPTPVNV++  K +
Sbjct:    9 LRLKFLFANHDGAHVELMFPKATTVEKVKAQLMQSWPQTVPPAENAKAVRLICMGRGILQDSHTLVSAGVPAFETHPTPVNVSVYRKAV 97

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot

BLAST of mRNA_Ecto-sp6_S_contig82.17435.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K5G8_9PHAE	1.040e-88	94.89	Rad60-SLD_2 domain-containing protein n=1 Tax=Ecto...	[more]
D7G185_ECTSI	1.840e-73	98.25	Rad60-SLD_2 domain-containing protein n=1 Tax=Ecto...	[more]
G4YNG2_PHYSP	2.850e-25	50.89	Rad60-SLD_2 domain-containing protein n=4 Tax=Phyt...	[more]
A0A1V9ZD72_9STRA	1.770e-24	42.50	Rad60-SLD_2 domain-containing protein n=1 Tax=Thra...	[more]
A0A2D4BX48_PYTIN	1.600e-23	42.74	Rad60-SLD_2 domain-containing protein n=1 Tax=Pyth...	[more]
A0A1V9ZGX4_9STRA	1.710e-23	43.22	Rad60-SLD_2 domain-containing protein n=1 Tax=Achl...	[more]
A0A7S2YH56_9STRA	2.520e-22	46.59	Hypothetical protein (Fragment) n=1 Tax=Amphiprora...	[more]
H3GTH8_PHYRM	3.080e-22	48.51	Rad60-SLD_2 domain-containing protein n=1 Tax=Phyt...	[more]
A0A2P4YRR0_9STRA	4.240e-22	49.02	Rad60-SLD_2 domain-containing protein n=1 Tax=Phyt...	[more]
A0A3F2RU18_9STRA	5.680e-22	50.56	Rad60-SLD_2 domain-containing protein n=3 Tax=Phyt...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 13..110 e-value: 8.5E-12 score: 46.8
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 20..134 e-value: 6.9E-14 score: 51.9
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 16..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp6_S_contig82	contig	Ecto-sp6_S_contig82:430214..436512 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species6 EcLAC_371 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp6_S_contig82.17435.1	mRNA_Ecto-sp6_S_contig82.17435.1	Ectocarpus species6 EcLAC_371	mRNA	Ecto-sp6_S_contig82 430214..436512 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17435.1 ID=prot_Ecto-sp6_S_contig82.17435.1|Name=mRNA_Ecto-sp6_S_contig82.17435.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=138bp
MASTGGATTLGTAAGAGGAALRLKFIFANHDGVVVEFETEPTTLVKDLKV
ALMGRWPTGVEPVQDLSHVRLVCMGFGILPDAKSLTECRVPHFDTHPTPV
NVAIRPKNIQVPQSDGGHAAKQNPGGSRRNRGCCTVS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039540	UBL3-like_ubiquitin_dom
IPR029071	Ubiquitin-like_domsf