prot_Ecto-sp6_S_contig82.17423.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig82.17423.1
Unique Nameprot_Ecto-sp6_S_contig82.17423.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length123
Homology
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BLAST of mRNA_Ecto-sp6_S_contig82.17423.1 vs. uniprot
Match: D7FZH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH4_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 8.360e-76
Identity = 108/121 (89.26%), Postives = 113/121 (93.39%), Query Frame = 0 
Query:    1 MAGVRLRDVRWDKASGSGICHGRLPVSPGTRKASTQHGTEGTLEESRVCPTRLWVTKTKRSDGYPCRVSLAAEGGIVDRRERVYLEMLISYVKDAGTKGFLHACFWAVPPRRTFSTCFPII 121
            MAGVRLRDVRW+KA GSGICHGRLPVSPGTR ASTQHGTEGTLEESRVCPTRLWVTKTKRSDGYPCR+SLAAEGGIVDRRERVYLEMLISYVKDAGTKGFLHACFWAVPP +  S  F ++
Sbjct:    1 MAGVRLRDVRWEKAPGSGICHGRLPVSPGTRNASTQHGTEGTLEESRVCPTRLWVTKTKRSDGYPCRISLAAEGGIVDRRERVYLEMLISYVKDAGTKGFLHACFWAVPPLKRGSYLFNML 121
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig82.17423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZH4_ECTSI8.360e-7689.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig82contigEcto-sp6_S_contig82:322779..324004 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig82.17423.1mRNA_Ecto-sp6_S_contig82.17423.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig82 322779..324096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig82.17423.1 ID=prot_Ecto-sp6_S_contig82.17423.1|Name=mRNA_Ecto-sp6_S_contig82.17423.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=123bp
MAGVRLRDVRWDKASGSGICHGRLPVSPGTRKASTQHGTEGTLEESRVCP
TRLWVTKTKRSDGYPCRVSLAAEGGIVDRRERVYLEMLISYVKDAGTKGF
LHACFWAVPPRRTFSTCFPIIW*
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