prot_Ecto-sp6_S_contig8.17040.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig8.17040.1
Unique Nameprot_Ecto-sp6_S_contig8.17040.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length317
Homology
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BLAST of mRNA_Ecto-sp6_S_contig8.17040.1 vs. uniprot
Match: D7FYY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYY2_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 6.890e-189
Identity = 311/316 (98.42%), Postives = 314/316 (99.37%), Query Frame = 0 
Query:    1 MMMMMGAMRGVRRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFASLLNKATGMDRGDGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNVIDMFLETIKDEQFISQFAEPGVVGELAQNSGLSALLGEDGMASVEKDDLLALLALEDSPILYKTKFYEIVDKFIGKTVAFRMDVANPVKLRRLVLETLQAAGLDQPMITQIMEVVEHPEIMAQQIKAMASDPTVIEQAKAAAEGFMTGMEVGNDMDYDDDELMEMLAAMGXXXXXXXXXXXXXXXXXXXXXXXLDAEGGAAGLFKGMGGGAGRQGLAAEL 316
            MMMMMGAMRG+RRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFASLLNKATGMDRGDGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNVIDMFLETIKDEQFISQFAEPGV+GELAQNSGLSALLGEDGMASVE+DDLLALLALEDSPILYKTKFYEIVDKFIGKTVAFRMDVANPVKLRRLVLETLQAAGLDQPMITQIMEVVEHPEIMAQQIKAMASDP VIEQAKAAAEGFMTGMEVGNDMDYDDDELMEMLAAMG XXXXXXXXXXXXXXXXXXXXXXLDAEGGAAGLFKGMGGGAGRQGLAAEL
Sbjct:    1 MMMMMGAMRGMRRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFASLLNKATGMDRGDGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNVIDMFLETIKDEQFISQFAEPGVLGELAQNSGLSALLGEDGMASVERDDLLALLALEDSPILYKTKFYEIVDKFIGKTVAFRMDVANPVKLRRLVLETLQAAGLDQPMITQIMEVVEHPEIMAQQIKAMASDPAVIEQAKAAAEGFMTGMEVGNDMDYDDDELMEMLAAMGQXXXXXXXXXXXXXXXXXXXXXXLDAEGGAAGLFKGMGGGAGRQGLAAEL 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.17040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYY2_ECTSI6.890e-18998.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..316
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..31
score: 0.86
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:1036592..1045170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.17040.1mRNA_Ecto-sp6_S_contig8.17040.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig8 1036453..1048146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig8.17040.1 ID=prot_Ecto-sp6_S_contig8.17040.1|Name=mRNA_Ecto-sp6_S_contig8.17040.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=317bp
MMMMMGAMRGVRRSLCVVVSLVLLSAVCVSAGKLWGVDVGKKEDKGEFAS
LLNKATGMDRGDGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNVIDMF
LETIKDEQFISQFAEPGVVGELAQNSGLSALLGEDGMASVEKDDLLALLA
LEDSPILYKTKFYEIVDKFIGKTVAFRMDVANPVKLRRLVLETLQAAGLD
QPMITQIMEVVEHPEIMAQQIKAMASDPTVIEQAKAAAEGFMTGMEVGND
MDYDDDELMEMLAAMGQEDPEMMEQIIAEIMKDPALAESLDAEGGAAGLF
KGMGGGAGRQGLAAEL*
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