prot_Ecto-sp6_S_contig8.16966.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig8.16966.1
Unique Nameprot_Ecto-sp6_S_contig8.16966.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 9.520e-128
Identity = 191/202 (94.55%), Postives = 192/202 (95.05%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVSLDGGGSSGSSSSKCC 202
            MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTV+L G         KCC
Sbjct:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVNLGGXXXXXXXXXKCC 202          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 339 bits (870), Expect = 7.250e-117
Identity = 179/206 (86.89%), Postives = 185/206 (89.81%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS----TVSLDGGGSSGSSSSKCC 202
            MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DK V +  AK +A+SLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAA Q ++S    TV L  G S G SS KCC
Sbjct:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN)

HSP 1 Score: 309 bits (792), Expect = 5.150e-105
Identity = 162/205 (79.02%), Postives = 176/205 (85.85%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDN---STVSLDGGGSSGSSSSKCC 202
            MSKRDYDHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHV+DWL+EVNRYA+EGT KLL+GNK D EDKVV + AAKEYA+ LGIPFLETSAKNA+NVEEAFLTMA ELIR REA  + +      S + L GG S    + KCC
Sbjct:    1 MSKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREASQSAKPGAGGASGLKLSGGSSR---TKKCC 202          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA)

HSP 1 Score: 307 bits (786), Expect = 5.380e-104
Identity = 154/178 (86.52%), Postives = 165/178 (92.70%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAA 178
            MSKRDYD LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT +ESF+H+ DWL+EVNRYASEGT KLL+GNKSDR DKVV +  AK++A+ LGIPFLETSAKNASNVEEAFLTMA ELIR REA+ A
Sbjct:    1 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGA 178          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.490e-103
Identity = 161/203 (79.31%), Postives = 173/203 (85.22%), Query Frame = 0
Query:    3 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAAT--QVDNSTVSLDGGGSSGSSSSKCC 202
            K DYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT Q+SFDHVNDWL EVNRYASEGT KLL+GNKSDR  DKVV +  AKE+A+ +GIPFLETSAK+A+NVEEAFLTMASELI+ R AR  T    D   V L GG  +    S CC
Sbjct:    8 KSDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGDNVQLGGGKRAKEMMSNCC 210          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: A0A7S2Y0T5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T5_9STRA)

HSP 1 Score: 303 bits (775), Expect = 1.740e-102
Identity = 154/202 (76.24%), Postives = 178/202 (88.12%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVSLDGGGSSGSSSSKCC 202
            MSKRDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D+KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYD+T +E+FDHVNDWL+EV+RYA E T KLL+GNKSDR D+ V++  AKEYA+ LGIPF+ETSAK+A+NVE+AFLTMA +LI  R+A+   +  N  VSL GG SS +S  +CC
Sbjct:    1 MSKRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDQKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDITHKEAFDHVNDWLAEVDRYAGESTCKLLVGNKSDRTDRAVETQTAKEYADELGIPFIETSAKSAANVEQAFLTMAKQLIELRQAKGVEE-SNQNVSL-GGKSSSTSLPQCC 200          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.420e-101
Identity = 158/200 (79.00%), Postives = 170/200 (85.00%), Query Frame = 0
Query:    4 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVSLDGGGSSGSSSSKCC 202
            RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT ++SFDHVNDW+ EVNRYASEGT KLL+GNKSDR  DK+V    AKE+A+ LGI FLETSAK+A NVEEAFLTMA ELI+ R  R +   D   VSL+G G S    S CC
Sbjct:   12 RDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADKIVKEEEAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQRAERGSNGDDKQKVSLNGEGRS-QVMSNCC 210          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE)

HSP 1 Score: 299 bits (766), Expect = 5.970e-101
Identity = 155/189 (82.01%), Postives = 165/189 (87.30%), Query Frame = 0
Query:    3 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVSLDG 190
            +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHVNDWL EVNRYA+EGT KLL+GNKSDR  DKVV    AKE+A+ LGI FLETSAK+A NVEEAFLTMA ELIR R+AR  T    S + L G
Sbjct:   12 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDARGITSDGKSGIDLSG 200          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: A0A7S2C3M2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3M2_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.490e-100
Identity = 149/175 (85.14%), Postives = 161/175 (92.00%), Query Frame = 0
Query:    2 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREAR 176
            +KRDYDHLFKLVLIGDSGVGKSCLLLRFAD+AFT+SYISTIGVDFRFRT+K++K TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF+HV+DWL+EVNRYASEGT KLL+GNKSDR D  V S  AK YAE LGIPFLETSAKNA NVE AFLTMASELI+ R+AR
Sbjct:    8 TKRDYDHLFKLVLIGDSGVGKSCLLLRFADNAFTESYISTIGVDFRFRTIKVEKNTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFNHVSDWLTEVNRYASEGTCKLLVGNKSDRADWAVSSEEAKVYAEKLGIPFLETSAKNAENVETAFLTMASELIKIRQAR 182          
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Match: A0A7S3JUQ1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUQ1_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.220e-99
Identity = 156/208 (75.00%), Postives = 177/208 (85.10%), Query Frame = 0
Query:    2 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARA------ATQVDNSTVSLDGGGSSGSSSSKCC 202
            +KRDYDHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK++ KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESFDHV +WL+EVNRYA+EGT KLL+GNKSD   +K V +  AKEYA+SLGIPFLETSAKNA+NVEEAFLTMA+ELI+ RE+++       T    S + L G   + SS+ KCC
Sbjct:    3 TKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVEGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVAEWLAEVNRYANEGTCKLLVGNKSDMGTEKCVSTETAKEYADSLGIPFLETSAKNATNVEEAFLTMAAELIKLRESKSNASGKGGTSTTASGLKLSG---TRSSNKKCC 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig8.16966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G118_ECTSI9.520e-12894.55Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835Z965_9STRA7.250e-11786.89Rab1A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
F0YFR6_AURAN5.150e-10579.02Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7TI50_9STRA5.380e-10486.52Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S3VAP6_9STRA1.490e-10379.31Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2Y0T5_9STRA1.740e-10276.24Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2N4U8_9STRA1.420e-10179.00Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1GR15_CYCTE5.970e-10182.01Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A7S2C3M2_9STRA1.490e-10085.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3JUQ1_9STRA1.220e-9975.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 33..49
score: 38.7
coord: 51..73
score: 56.57
coord: 10..31
score: 58.6
coord: 113..126
score: 40.09
coord: 147..169
score: 44.71
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 10..172
e-value: 9.4E-96
score: 334.1
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 7..172
e-value: 1.1E-31
score: 121.3
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 12..173
e-value: 4.9E-14
score: 59.3
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 15..201
e-value: 7.9E-5
score: 19.7
NoneNo IPR availableGENE3D3.40.50.300coord: 3..202
e-value: 4.6E-68
score: 230.5
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 3..179
NoneNo IPR availablePANTHERPTHR24073:SF1110ZGC:171927coord: 3..179
NoneNo IPR availablePROSITEPS51419RABcoord: 5..202
score: 37.036
IPR001806Small GTPasePFAMPF00071Rascoord: 11..169
e-value: 1.8E-61
score: 206.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..164
e-value: 6.7E-33
score: 111.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig8contigEcto-sp6_S_contig8:69319..78679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig8.16966.1mRNA_Ecto-sp6_S_contig8.16966.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig8 69214..78860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig8.16966.1 ID=prot_Ecto-sp6_S_contig8.16966.1|Name=mRNA_Ecto-sp6_S_contig8.16966.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=203bp
MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRT
VKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHV
NDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLET
SAKNASNVEEAFLTMASELIRTREARAATQVDNSTVSLDGGGSSGSSSSK
CC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase