prot_Ecto-sp6_S_contig110.1474.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig110.1474.1
Unique Nameprot_Ecto-sp6_S_contig110.1474.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length468
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: D7G4K1_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K1_ECTSI)

HSP 1 Score: 607 bits (1564), Expect = 3.950e-215
Identity = 368/424 (86.79%), Postives = 370/424 (87.26%), Query Frame = 0
Query:    1 MIFDNLLGSGASNYLLRPQQDHGEETFEEXXXXXXXXXXXXDGGRTGLACGSTPATGRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYESVPGKRNTCDDRSGSPGDERHCLNRPTRSSSRSSVCDSHSSCGESVVLSSRTRSGVAKRKHAALAQEEQRRKEHDEDQQHQERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----DDQRKAKGLPGSTPDHPCQGLHPYPVXXXSPLALGLLYPEQQSRLPGVEWPAPLHGCGGMMARFKEPRDARHEDFGDECEQAFFTVPDVAECNFGSSPLSSFLEDTPGAEYFGVPPTDRHGAAPAIAAAAXXGDTAGGPGSRNGGSGGDGEELDSTLAESRLGGAGGWHDWYPTEGWVDKQQVAHNVE 419
            MIFDNLL SGASNYLLRPQQDHGEETFEEXXXXXXXXXXXXDGGRTGLACGSTPATGRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYESVPGKRNTCDDRSGSPGDERHCLNRPTRSSSRSSVC+SHSS GESV LSSRTRSGVAKRKHAALAQEEQRRKEHDEDQQHQERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DD RK                                    QSR PGVEWPAPLH  GGMMARFKEPRDARHEDFGDECEQAFFTVPDVAECNFGSSPLSSFLEDTPGAEYFGVPPTDRHGAAPAIAAA XXGDTAGGPGSR+GGSGGDGEELDSTLAESRLGG GGWHDWYPTEGWVDKQQ A   E
Sbjct:    1 MIFDNLLRSGASNYLLRPQQDHGEETFEEXXXXXXXXXXXXDGGRTGLACGSTPATGRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYESVPGKRNTCDDRSGSPGDERHCLNRPTRSSSRSSVCNSHSSSGESVDLSSRTRSGVAKRKHAALAQEEQRRKEHDEDQQHQERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDPRK------------------------------------QSRPPGVEWPAPLHDGGGMMARFKEPRDARHEDFGDECEQAFFTVPDVAECNFGSSPLSSFLEDTPGAEYFGVPPTDRHGAAPAIAAAXXXGDTAGGPGSRHGGSGGDGEELDSTLAESRLGGGGGWHDWYPTEGWVDKQQAATQSE 388          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: A0A6H5JC35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC35_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.550e-11
Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 0
Query:   57 GRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYESV 119
            GRWTK+EH  FL GL   GK+W ++    V +R+A Q+RTH QKYF KV++G+ FPE+PYES+
Sbjct:    8 GRWTKEEHDAFLQGLVLHGKNW-DLIAPIVKTRSAVQVRTHGQKYFKKVDKGERFPEEPYESM 69          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: A0A5B6YQC3_DAVIN (Putative transcription factor DIVARICATA-like n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YQC3_DAVIN)

HSP 1 Score: 70.5 bits (171), Expect = 8.460e-10
Identity = 31/49 (63.27%), Postives = 39/49 (79.59%), Query Frame = 0
Query:   59 WTKKEHADFLVGLEACGK-DWMEISCHFVFSRTATQIRTHAQKYFTKVN 106
            WT++EH  FL+GLE CGK DW  IS +FVFSRT TQ+ +HAQKYF ++N
Sbjct:  123 WTEEEHRLFLMGLERCGKGDWRSISRNFVFSRTPTQVASHAQKYFNRLN 171          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: D7FXQ4_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXQ4_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.810e-9
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   57 GRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYES 118
            GRWT +EHA+FL G+E   +  +E     + +RT  Q+RTHAQKYF KV++G+ FP +PY S
Sbjct:    8 GRWTHEEHAEFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPNEPYPS 69          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: A0A1E7FY50_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FY50_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.880e-9
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   58 RWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQ 109
            RWT++EH  FL GL+ CG++W ++S   + +RT+ QIR+HAQKYF+K+ R Q
Sbjct:    1 RWTQEEHQAFLEGLKDCGREWKKVSLR-IPTRTSAQIRSHAQKYFSKLQRDQ 51          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: A0A804KZ44_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KZ44_MUSAM)

HSP 1 Score: 67.0 bits (162), Expect = 1.260e-8
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0
Query:   59 WTKKEHADFLVGLEACGK-DWMEISCHFVFSRTATQIRTHAQKYFTKVNRG 108
            WT++EH  FL+GL+ CGK DW  IS +FV +RT TQ+ +HAQKYF ++N G
Sbjct:  139 WTEEEHRLFLLGLDKCGKGDWRNISRNFVMTRTPTQVASHAQKYFIRLNSG 189          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: J9IK38_9SPIT (Myb-like DNA-binding domain, SHAQKYF class family protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IK38_9SPIT)

HSP 1 Score: 68.6 bits (166), Expect = 1.340e-8
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   56 TGRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQS 110
            +GRWT +EH  FLVGL+  GKDW  I   ++ SRT  QIR+HAQKYF K+NR  S
Sbjct:  307 SGRWTDEEHEKFLVGLKIYGKDWRLIE-EYIGSRTCAQIRSHAQKYFNKLNRNSS 360          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: A0A6H5KVV5_9PHAE (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV5_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 1.560e-8
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   57 GRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYES 118
            GRWT +EHA FL G+E   +  +E     + +RT  Q+RTHAQKYF KV++G+ FP +PY S
Sbjct:    8 GRWTHEEHAVFLRGVELFKRSDLEAVASMLPTRTILQVRTHAQKYFDKVDKGEPFPTEPYPS 69          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: D8LPL1_ECTSI (HTH myb-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL1_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 1.720e-8
Identity = 34/64 (53.12%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   57 GRWTKKEHADFLVGLEACGKDWM-EISCH-FVFSRTATQIRTHAQKYFTKVNRGQSFPEQPYES 118
            G+WT++EH  FL GL      W  E + H  V +R+A QIRTHAQKYF K+ RG+ FP QPY S
Sbjct:    9 GKWTREEHEAFLSGL------WQHESNSHALVPTRSALQIRTHAQKYFDKIERGEKFPAQPYPS 66          
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Match: A0A5J5AMC5_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5AMC5_9ASTE)

HSP 1 Score: 67.8 bits (164), Expect = 1.790e-8
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   59 WTKKEHADFLVGLEACGK-DWMEISCHFVFSRTATQIRTHAQKYFTKVN 106
            WT++EH  FL+GLE CGK DW  IS +FV SRT TQ+ +HAQKYF ++N
Sbjct:   24 WTEEEHRLFLMGLERCGKGDWKSISRNFVLSRTPTQVASHAQKYFIRLN 72          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K1_ECTSI3.950e-21586.79Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JC35_9PHAE1.550e-1155.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5B6YQC3_DAVIN8.460e-1063.27Putative transcription factor DIVARICATA-like n=1 ... [more]
D7FXQ4_ECTSI1.810e-950.00HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A1E7FY50_9STRA1.880e-951.92Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A804KZ44_MUSAM1.260e-856.86(wild Malaysian banana) hypothetical protein n=1 T... [more]
J9IK38_9SPIT1.340e-858.18Myb-like DNA-binding domain, SHAQKYF class family ... [more]
A0A6H5KVV5_9PHAE1.560e-850.00HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
D8LPL1_ECTSI1.720e-853.13HTH myb-type domain-containing protein n=1 Tax=Ect... [more]
A0A5J5AMC5_9ASTE1.790e-861.22Uncharacterized protein n=1 Tax=Nyssa sinensis Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..231
NoneNo IPR availableGENE3D1.10.10.60coord: 58..106
e-value: 1.3E-11
score: 46.3
NoneNo IPR availablePANTHERPTHR44191FAMILY NOT NAMEDcoord: 58..107
NoneNo IPR availablePANTHERPTHR44191:SF2coord: 58..107
IPR001005SANT/Myb domainSMARTSM00717santcoord: 55..104
e-value: 4.6E-5
score: 32.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 56..101
e-value: 4.8E-8
score: 33.1
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 58..104
e-value: 1.2E-9
score: 36.3
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 56..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:205219..210774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1474.1mRNA_Ecto-sp6_S_contig110.1474.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig110 205219..210774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig110.1474.1 ID=prot_Ecto-sp6_S_contig110.1474.1|Name=mRNA_Ecto-sp6_S_contig110.1474.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=468bp
MIFDNLLGSGASNYLLRPQQDHGEETFEESGGGGGGSSSSSDGGRTGLAC
GSTPATGRWTKKEHADFLVGLEACGKDWMEISCHFVFSRTATQIRTHAQK
YFTKVNRGQSFPEQPYESVPGKRNTCDDRSGSPGDERHCLNRPTRSSSRS
SVCDSHSSCGESVVLSSRTRSGVAKRKHAALAQEEQRRKEHDEDQQHQER
PHQELQHHEDQHHEEQELQEQQDQEQGQEQQDDQRKAKGLPGSTPDHPCQ
GLHPYPVPVPSPLALGLLYPEQQSRLPGVEWPAPLHGCGGMMARFKEPRD
ARHEDFGDECEQAFFTVPDVAECNFGSSPLSSFLEDTPGAEYFGVPPTDR
HGAAPAIAAAAAAGDTAGGPGSRNGGSGGDGEELDSTLAESRLGGAGGWH
DWYPTEGWVDKQQVAHNVETAEASCGVINLNRRFYGFTTAGSSSSSNNNN
NNNNNNSNTCSGTSTEAM
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf