prot_Ecto-sp6_S_contig110.1457.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig110.1457.1
Unique Nameprot_Ecto-sp6_S_contig110.1457.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length430
Homology
BLAST of mRNA_Ecto-sp6_S_contig110.1457.1 vs. uniprot
Match: D7G4I1_ECTSI (Predicted mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I1_ECTSI)

HSP 1 Score: 805 bits (2079), Expect = 1.570e-293
Identity = 420/432 (97.22%), Postives = 421/432 (97.45%), Query Frame = 0
Query:    1 MRWLWAGALASTMGNVMASTSLDRSAAEILAFGSCGSIGNGASSSSIRSGRAGPQHVSRISAEPATMSLTTRAPADS---SSMRPGGGATAAGTRAAGLPSFWAAFSPSRAGRGRALVSPLSAKADSDESGVMDKKVEFYGNSAPGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMARTAGD 429
            MRWLWAGALASTMGNVMASTSLDRSAAE LAFGSCGSIG+GA SSSIRSGRAGPQHVSRISAEPATMSLTTRAPADS   SSMRPGGGATAAGTRAAGLPSFWAA SPSRAGRG ALVSPLSAKADSDESGVMDKK EFYGN APGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATR FHDP QELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMARTAGD
Sbjct:    1 MRWLWAGALASTMGNVMASTSLDRSAAETLAFGSCGSIGSGACSSSIRSGRAGPQHVSRISAEPATMSLTTRAPADSGDSSSMRPGGGATAAGTRAAGLPSFWAALSPSRAGRGGALVSPLSAKADSDESGVMDKKAEFYGNLAPGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRTFHDPAQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMARTAGD 432          
BLAST of mRNA_Ecto-sp6_S_contig110.1457.1 vs. uniprot
Match: A0A835YUL6_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUL6_9STRA)

HSP 1 Score: 233 bits (593), Expect = 4.840e-69
Identity = 127/313 (40.58%), Postives = 188/313 (60.06%), Query Frame = 0
Query:  142 PGAVAPEGAEKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLA---------------MMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPS-----------------MMRNNEGCIVLQPADLQAY 422
            PGA A     K ++A  +YA GG+W K+V LI  MR+ +  PS+ AY  TI A R+  E+D A  LL+DM   C+P DL   YAA  P+    TQTQ VF L                + MR D++EP  +TYRA+MG+ +K++LW +SLLL+EH++  G+ PGKF+Y+EIC+VL   G  ++A +++E +LG+ + E       ++DLH+ T++TA AAVR  L DM R+P+ RPFHDP   + IITG+G  S++G AVIKP ++++L+     P+                 + ++N GC+ +QP  LQA+
Sbjct:   14 PGAEAAPETAKYNDAIKKYASGGEWAKAVVLIDKMREINLSPSIEAYGDTITALRRGLEFDRADALLADMYDACMPADLFAKYAAADPSDASSTQTQCVFALENXXXXXXXXXXXXLLLCMRTDQLEPDVDTYRAVMGMCTKDRLWHLSLLLLEHMRLRGVQPGKFIYNEICTVLDMEGKHDLAEIVYERSLGEGVFEPWIEDDNKVDLHSFTLNTARAAVRSALTDMLRQPSGRPFHDPAAPMHIITGVGRRSEEGVAVIKPAILDMLNVELQIPAEXXXXXXXXXXXXXXXXVQKHNPGCVEIQPQHLQAW 326          
BLAST of mRNA_Ecto-sp6_S_contig110.1457.1 vs. uniprot
Match: D7G4J1_ECTSI (Smr domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4J1_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.510e-43
Identity = 100/296 (33.78%), Postives = 153/296 (51.69%), Query Frame = 0
Query:  164 GDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGEYDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQ-----TQKVFC-----LAMMMRQDKIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEEL------------------------NSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLEPSMMRNNEGCIVLQPADLQAYMAR 425
            GDWE ++++++ +RD    PS++ ++  I  CR+A E+D AS    +M         I+A+   HP      Q     +  VF      +A M     I+P   TYRA++ L   E  W+ ++LL+EH +R+      F +D + + + K G+ E++TM++E  + D    L                               L+LH+ T   AL  V+V LLD+ R+P  RP+    +   IITGMGNNSKD EA+IKP V+ELL D+GL P   + NEGC+ L+PA+L+AY+ R
Sbjct:    5 GDWEGALEMLQRIRDKGMKPSMSTHMDVISVCRRALEWDQASKAYREM---------IEAHLTDHPFDDMACQDYEDESNHVFARACGIVAGMQADAGIKPNNGTYRALLQLCKDEGSWEAAILLLEHSRRSKAKLNLFSFDLLITTVAKQGYKEVSTMLYELGVVDADRALLETEGNXXXXXXXXVEWPKWPLKVGRTGGAILELHDLTQGIALETVQVALLDVIRRPLRRPYWSGDKRWRIITGMGNNSKDREAIIKPAVVELLEDLGLRPEFQQRNEGCVELKPANLEAYIRR 291          
BLAST of mRNA_Ecto-sp6_S_contig110.1457.1 vs. uniprot
Match: A0A813H707_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H707_POLGL)

HSP 1 Score: 58.9 bits (141), Expect = 1.440e-5
Identity = 44/172 (25.58%), Postives = 73/172 (42.44%), Query Frame = 0
Query:  272 WQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRPFHDPTQE---------------LLIITGMGNNSKDGEAVIKPRVMELL-SDMGLEPSMMRNNEGCIVLQPADLQAYMARTA 427
            W  +L ++  +++  L P      ++   +   G    A  I+ +A         + A   +DLHN     A  AVRV LL+ A      P  D   E               LL++ G+G NSK GEA ++P V+ LL  ++GL       NEG + +   +++ ++   A
Sbjct:  967 WAHALAVLGEMRQAALEPDAGTLGKLLEAMVDEGKLPQAVAIYREANQRSSSACATIAAQGVDLHNLPAELARLAVRVALLNAATAAGASP--DKWAEDAAFRRKLGLARDGSLLLVVGLGRNSKSGEASLRPAVLHLLHEELGLHGYAEERNEGRLRVPATEIRRFLGARA 1136          
BLAST of mRNA_Ecto-sp6_S_contig110.1457.1 vs. uniprot
Match: A0A813KVN0_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KVN0_POLGL)

HSP 1 Score: 57.0 bits (136), Expect = 4.630e-5
Identity = 55/213 (25.82%), Postives = 83/213 (38.97%), Query Frame = 0
Query:  259 YRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSVLFKTGHPEMATMIFEDALGDKI-------EELNSFAPPE-------------LDLHNHTVSTALAAVRVVLLDMAR--KPATRPFH-----------------DPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMG----LEPSMMRNNEGCIVLQPADLQAYMARTAG 428
            + A +    K  LW+ +L + + +  +GL P +  Y      L   G  E A +++ +A+   +          N+  P E             LDLHN  V  A  AV   L ++    +P                       D T+ L IITG GN+S  GEAV++  V+E+L  +G    LE  +  NN G I  +         RT G
Sbjct:  324 FNATISALEKAHLWERALQVFDDVPAHGLKPDEVTYGSTILALHAGGQQEAARLVYSEAVECSLISPVVRRVSRNAGFPGEFRQDARELHHELVLDLHNLPVVVAELAVEAALDELIALSQPVVHTGSQDEEVSSSLSLSSTVAIDTTESLSIITGRGNHSPGGEAVMREAVLEMLDKLGPRLGLEAHVDPNNPGLICCRAVRRDLMAQRTLG 536          
BLAST of mRNA_Ecto-sp6_S_contig110.1457.1 vs. uniprot
Match: A0A5J4YS53_PORPP (Smr domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS53_PORPP)

HSP 1 Score: 55.5 bits (132), Expect = 4.910e-5
Identity = 38/96 (39.58%), Postives = 52/96 (54.17%), Query Frame = 0
Query:  306 HPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVVLLDMARKPATRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGLE 401
            H + A  IFE+  G     +      E+DLH+  V  AL  V   L ++A+KP      +   EL IITG GN+S DG+A I+P V+ELL   GL+
Sbjct:  106 HKQAAAAIFEELNGAMNRGMY-----EMDLHSLLVHEALEFVEQRLDELAKKP------NKGNELQIITGRGNHSADGQAKIRPAVVELLDARGLK 190          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G4I1_ECTSI1.570e-29397.22Predicted mitochondrial protein n=2 Tax=Ectocarpus... [more]
A0A835YUL6_9STRA4.840e-6940.58Smr domain-containing protein n=1 Tax=Tribonema mi... [more]
D7G4J1_ECTSI1.510e-4333.78Smr domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A813H707_POLGL1.440e-525.58Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A813KVN0_POLGL4.630e-525.82Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A5J4YS53_PORPP4.910e-539.58Smr domain-containing protein n=1 Tax=Porphyridium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002625Smr domainSMARTSM00463SMR_2coord: 330..417
e-value: 1.8E-8
score: 44.2
IPR002625Smr domainPFAMPF01713Smrcoord: 333..397
e-value: 5.5E-7
score: 29.9
IPR002625Smr domainPROSITEPS50828SMRcoord: 333..417
score: 14.806
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 224..330
e-value: 1.6E-5
score: 26.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 158..223
e-value: 5.8E-7
score: 31.2
NoneNo IPR availableGENE3D3.30.1370.110coord: 331..415
e-value: 8.0E-12
score: 47.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..429
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.621
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 332..412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:56612..64126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1457.1mRNA_Ecto-sp6_S_contig110.1457.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig110 56612..65907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig110.1457.1 ID=prot_Ecto-sp6_S_contig110.1457.1|Name=mRNA_Ecto-sp6_S_contig110.1457.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=430bp
MRWLWAGALASTMGNVMASTSLDRSAAEILAFGSCGSIGNGASSSSIRSG
RAGPQHVSRISAEPATMSLTTRAPADSSSMRPGGGATAAGTRAAGLPSFW
AAFSPSRAGRGRALVSPLSAKADSDESGVMDKKVEFYGNSAPGAVAPEGA
EKQDEAAVEYAVGGDWEKSVQLIKAMRDSDFVPSVNAYVATIEACRKAGE
YDHASTLLSDMNKVCLPEDLIKAYAAPHPNAPGVTQTQKVFCLAMMMRQD
KIEPFEETYRAIMGLASKEKLWQVSLLLVEHLKRNGLVPGKFVYDEICSV
LFKTGHPEMATMIFEDALGDKIEELNSFAPPELDLHNHTVSTALAAVRVV
LLDMARKPATRPFHDPTQELLIITGMGNNSKDGEAVIKPRVMELLSDMGL
EPSMMRNNEGCIVLQPADLQAYMARTAGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR011990TPR-like_helical_dom_sf
IPR036063Smr_dom_sf