prot_Ecto-sp6_S_contig110.1456.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig110.1456.1
Unique Nameprot_Ecto-sp6_S_contig110.1456.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length364
Homology
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BLAST of mRNA_Ecto-sp6_S_contig110.1456.1 vs. uniprot
Match: D7G4I0_ECTSI (Senescence domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I0_ECTSI)

HSP 1 Score: 662 bits (1707), Expect = 4.060e-239
Identity = 359/363 (98.90%), Postives = 361/363 (99.45%), Query Frame = 0 
Query:    1 MTSKLPPPPEKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATGAVNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGKEFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGVIESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTATTLTGARKVVGAGAGVAAAVIDKVSSVAGNAVANSSIVANSRGAPEGSKRREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLGMTTLVKGAVKGATAAGSQSSSTSNVGGYVAQPAPPNPSSS 363
            MTSKLPPPPEKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATGAVNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGKEFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGVIESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTATTLTGARKVVGAGAGVAAAVIDKVS+VAGNAVANSSIVANSRGAP GS RREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLG+TTLVKGAVKGATAAGSQSSSTSNVGGYVAQPAPPNPSSS
Sbjct:    1 MTSKLPPPPEKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATGAVNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGKEFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGVIESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTATTLTGARKVVGAGAGVAAAVIDKVSTVAGNAVANSSIVANSRGAPAGSTRREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLGVTTLVKGAVKGATAAGSQSSSTSNVGGYVAQPAPPNPSSS 363
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BLAST of mRNA_Ecto-sp6_S_contig110.1456.1 vs. uniprot
Match: A0A1X6P731_PORUM (Senescence domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P731_PORUM)

HSP 1 Score: 69.7 bits (169), Expect = 1.990e-9
Identity = 43/128 (33.59%), Postives = 64/128 (50.00%), Query Frame = 0 
Query:  202 TLTGARKVVGAGAGVAAAVIDKVSSVAGNAVANSSIVANSRGAPEGSKRREAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEHAARSAGQIGLDGWRIFRFPTKLGMTTLVK 329
            T +G  +     AG    V  +V++  G  +A S  +  +R AP  S     H  L TG +A   ++EAAD  G+ +L +T  G   +  A+YG  A   A  AG   +  +R+ RFP+K G TT+VK
Sbjct:  239 TFSGVGRASSGVAGALTGVGHRVATAVGGGLAESGAMRRAREAPPNSVGGVFHTALSTGCLAFANIYEAADETGRAILTTTATGTTALTDARYGPRAASVAHDAGLTAVSAYRVVRFPSKFGATTVVK 366
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig110.1456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4I0_ECTSI4.060e-23998.90Senescence domain-containing protein n=2 Tax=Ectoc... [more]
A0A1X6P731_PORUM1.990e-933.59Senescence domain-containing protein n=1 Tax=Porph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009686Senescence/spartin-associatedPFAMPF06911Senescencecoord: 148..307
e-value: 2.8E-7
score: 31.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig110contigEcto-sp6_S_contig110:52307..54113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig110.1456.1mRNA_Ecto-sp6_S_contig110.1456.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig110 51579..55799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig110.1456.1 ID=prot_Ecto-sp6_S_contig110.1456.1|Name=mRNA_Ecto-sp6_S_contig110.1456.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=364bp
MTSKLPPPPEKQPPLGDLPAGVPYEAILTAVGTLAEQSPSAGGGVSATGA
VNVIQGRVDENPEAGFFGFLSVENLNVPLVSTSRSSRVGPGVYRVCIPGK
EFLLTLDQRTEPPIVEGMENVLRWFTAFEGDEMPRGVTPAGVKATGVKGV
IESAGVAGAAMIMRVGEALNASIKERTEAKLAAQADQPAKKVKLGGAVTA
TTLTGARKVVGAGAGVAAAVIDKVSSVAGNAVANSSIVANSRGAPEGSKR
REAHDMLVTGAVALGRVWEAADGQGKLLLESTGDGMGRIAGAKYGSEAEH
AARSAGQIGLDGWRIFRFPTKLGMTTLVKGAVKGATAAGSQSSSTSNVGG
YVAQPAPPNPSSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009686Senescence/spartin