prot_Ecto-sp6_S_contig11.1273.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig11.1273.1
Unique Nameprot_Ecto-sp6_S_contig11.1273.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length597
Homology
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: A0A6H5JT04_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT04_9PHAE)

HSP 1 Score: 844 bits (2181), Expect = 3.330e-304
Identity = 449/500 (89.80%), Postives = 459/500 (91.80%), Query Frame = 0
Query:   97 EAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTHFGRDAAADCQAGALVAGQAQRRSGGGDIAGCRKVVPAGAGAVGSMETREYKAAAGAVRSPKSGDTLHMLAPPSDIGLLGRGGARGVFGTARIASSDARATAAAAVEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTGGPHAHGENGEKHLEGGELGESLGKHDNSSACHRXXXXXXXXXXXHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSEAAHIDSKACAKGAAALLVTEQQLATKAEAEVLPFPPLAEQQNSAAVVSAVASGAGGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQGNSSSPETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGEREAGEGNEAAEGVVSFAPPALDSPAATPVPPSVVAA 596
            +AFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPG+PGTTT FGRD    C+AGALVAGQAQRRSGGGDI GCRKVVPAGAGAVGSMETRE KAAAGAVRSPK GDTLHMLAPPSDIG +GRGGARG FGTARIASSDA ATAAA  EGQCVEDVVESGHAGPVLLLGRTKTKPLSPGP HS  GPHAHGENGEKHLE GELGESLGKHD+  ACHRXXXXXX     HLSQEMKV SSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSE AH+DSKACAKGAAALLVTEQQLATKA AEVLP  PLAE QNSAA VS V SGA GSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWI GHPSCPYCKGDLNVIPQ N+SS ETTAICYACSVLS MVSFV GP VRFFRG+WERRRQQREQTAEGGG+REAGEGNEAAEGVVSFAPPAL+S AATPVPPSVVAA
Sbjct:   56 QAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGSPGTTTPFGRDPGGGCRAGALVAGQAQRRSGGGDITGCRKVVPAGAGAVGSMETRESKAAAGAVRSPKIGDTLHMLAPPSDIGQVGRGGARGAFGTARIASSDAGATAAATAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPCHSADGPHAHGENGEKHLEVGELGESLGKHDHFLACHRXXXXXXRPFHQHLSQEMKVSSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSETAHVDSKACAKGAAALLVTEQQLATKAGAEVLPLSPLAEHQNSAAAVSVVVSGADGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWICGHPSCPYCKGDLNVIPQENNSSSETTAICYACSVLSGMVSFVTGPLVRFFRGIWERRRQQREQTAEGGGDREAGEGNEAAEGVVSFAPPALESSAATPVPPSVVAA 555          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: D8LAX1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX1_ECTSI)

HSP 1 Score: 798 bits (2060), Expect = 2.540e-287
Identity = 440/557 (78.99%), Postives = 444/557 (79.71%), Query Frame = 0
Query:   40 MVAVVSQGYLCAIFVSIPPSGEEDDLVVILMSLHDSQATGRVVSYDPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTHFGRDAAADCQAGALVAGQAQRRSGGGDIAGCRKVVPAGAGAVGSMETREYKAAAGAVRSPKSGDTLHMLAPPSDIGLLGRGGARGVFGTARIASSDARATAAAAVEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTGGPHAHGENGEKHLEGGELGESLGKHDNSSACHRXXXXXXXXXXXHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSEAAHIDSKACAKGAAALLVTEQQLATKAEAEVLPFPPLAEQQNSAAVVSAVASGAGGSARANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQGNSSSPETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGEREAGEGNEAAEGVVSFAPPALDSPAATPVPPSVVAA 596
            MVAVVSQGYLCAIFVSIPP                          DPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTT FGRDAAADCQAGALVAGQAQRRSGGGDIAG RKVVPAGAGAVGSMETRE KAAAGAVRSPKSGDTLHMLAPPSDIGL+GRGGARGVFGTARIASSDARA AAAA EGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHST GPHAHGENGEKHLEGGELGESLGKHD+ SACHR    XXXX   HLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR                                                                      ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ N+SS ETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGG+REAGEGNEAAEGVV FAPPALDSPAATPVPPSVVAA
Sbjct:    1 MVAVVSQGYLCAIFVSIPP--------------------------DPKPRGVTQINREAFASFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTPFGRDAAADCQAGALVAGQAQRRSGGGDIAGFRKVVPAGAGAVGSMETRECKAAAGAVRSPKSGDTLHMLAPPSDIGLVGRGGARGVFGTARIASSDARAAAAAAAEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTRGPHAHGENGEKHLEGGELGESLGKHDHFSACHRHRHCXXXXFHQHLSQEMKVCSSWTGSAQTDAPSIGSDDDNDDTAVRLR----------------------------------------------------------------------ANDETVVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQENNSSHETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQREQTAEGGGDREAGEGNEAAEGVVRFAPPALDSPAATPVPPSVVAA 461          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: UPI000C1CE394 (RING-H2 finger protein ATL8-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CE394)

HSP 1 Score: 76.6 bits (187), Expect = 2.280e-12
Identity = 42/99 (42.42%), Postives = 55/99 (55.56%), Query Frame = 0
Query:  450 RVSELPDVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNV--------IPQGNSSSPETTAICYACSVLSRMVSFVAGPFVRF 539
            RV +L D CAIC+ ++A GEEV VLP C HIFH EC+D W+R H SCP C+ +L V        +P   SSS  +    YA +    +    + P  RF
Sbjct:  101 RVEKLAD-CAICMAEFAAGEEVRVLPQCRHIFHVECVDTWLRSHSSCPSCRENLVVSRCQKCRNLPAATSSSSSS----YAATNFGALPQPASRPIDRF 194          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: A0A836CLU7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLU7_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.900e-12
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0
Query:  447 TVVRVSELPDVCAICLGQYATGEEVHVLPC--LHIFHAECLDVWIRGHPSCPYCKGDLNVIPQGNSSSPETTAI 518
            T V  SEL   C ICLG Y TGE +  LPC   H++H EC+++W+ GH +CPYCK DL +  +    SP  TA+
Sbjct:   64 TAVATSELQ--CVICLGDYTTGESLCRLPCPFQHVYHVECINLWLDGHSTCPYCKYDLMLAAE-EEQSPSATAM 134          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: A0A8C3ZMD8_9TELE (RING-type domain-containing protein n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C3ZMD8_9TELE)

HSP 1 Score: 72.8 bits (177), Expect = 3.610e-12
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:  458 CAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDL 502
            C ICL +Y  GEE+ VLPCLH FHAEC+D W++ +PSCP C+ D+
Sbjct:   47 CRICLCEYTAGEELRVLPCLHDFHAECVDRWLQQNPSCPICRADV 91          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: A0A5E4F3R2_PRUDU (RING-type E3 ubiquitin transferase n=2 Tax=Prunus TaxID=3754 RepID=A0A5E4F3R2_PRUDU)

HSP 1 Score: 73.9 bits (180), Expect = 7.500e-12
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:  443 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 507
            A+ + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   73 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 139          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: A0A251NVP6_PRUPE (RING-type E3 ubiquitin transferase n=4 Tax=Prunus TaxID=3754 RepID=A0A251NVP6_PRUPE)

HSP 1 Score: 73.9 bits (180), Expect = 7.860e-12
Identity = 29/67 (43.28%), Postives = 46/67 (68.66%), Query Frame = 0
Query:  443 ANDETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 507
            A+ + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   75 AHHQLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 141          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: A0A4Y1RQH7_PRUDU (RING-type E3 ubiquitin transferase n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RQH7_PRUDU)

HSP 1 Score: 72.8 bits (177), Expect = 8.980e-12
Identity = 28/64 (43.75%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  446 ETVVRVSELPD-VCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGDLNVIPQ 507
            + +  V E+ D +CA+CL ++  GE + VLP C+H+FHAEC+D+W+  H +CP C+ D+   PQ
Sbjct:   46 QLIPTVEEIKDGICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPPPQ 109          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: D8LS07_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS07_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.510e-11
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  448 VVRVSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKGDLNV 504
            V+R SEL   C++CL  Y   E V +LPC H++H EC+D+W+R H  CPYC+ D+NV
Sbjct:  312 VIRASELNASCSVCLFGYFVDEAVTLLPCGHLYHTECIDIWMRDHVDCPYCRADMNV 368          
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Match: A0A1E5V459_9POAL (RING-type domain-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5V459_9POAL)

HSP 1 Score: 73.2 bits (178), Expect = 4.340e-11
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  456 DVCAICLGQYATGEEVHVLP-CLHIFHAECLDVWIRGHPSCPYCKGD-LNVIPQGNSSS 512
            DVCAICLG++A GE+V VLP C H FH  C+D W+  H SCP C+G  L+  P G++ +
Sbjct:  126 DVCAICLGEFADGEKVRVLPRCAHGFHVRCIDTWLLSHDSCPTCRGTVLDAAPPGSAKA 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig11.1273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT04_9PHAE3.330e-30489.80RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LAX1_ECTSI2.540e-28778.99RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI000C1CE3942.280e-1242.42RING-H2 finger protein ATL8-like n=1 Tax=Olea euro... [more]
A0A836CLU7_9STRA2.900e-1247.30RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8C3ZMD8_9TELE3.610e-1260.00RING-type domain-containing protein n=1 Tax=Dentic... [more]
A0A5E4F3R2_PRUDU7.500e-1243.28RING-type E3 ubiquitin transferase n=2 Tax=Prunus ... [more]
A0A251NVP6_PRUPE7.860e-1243.28RING-type E3 ubiquitin transferase n=4 Tax=Prunus ... [more]
A0A4Y1RQH7_PRUDU8.980e-1243.75RING-type E3 ubiquitin transferase n=1 Tax=Prunus ... [more]
D8LS07_ECTSI1.510e-1150.88RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A1E5V459_9POAL4.340e-1152.54RING-type domain-containing protein n=1 Tax=Dichan... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 458..498
e-value: 4.7E-6
score: 36.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 457..499
e-value: 2.3E-12
score: 47.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 458..499
score: 12.106
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 445..516
e-value: 9.5E-17
score: 61.9
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 396..502
NoneNo IPR availablePANTHERPTHR14155:SF202coord: 396..502
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 545..596
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 524..544
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..523
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 451..505
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig11contigEcto-sp6_S_contig11:927292..930993 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig11.1273.1mRNA_Ecto-sp6_S_contig11.1273.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig11 927292..930993 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig11.1273.1 ID=prot_Ecto-sp6_S_contig11.1273.1|Name=mRNA_Ecto-sp6_S_contig11.1273.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=597bp
LFGSGLIFSTGLVWFFVQAWIFAIEAQTVWLIILLTVTTMVAVVSQGYLC
AIFVSIPPSGEEDDLVVILMSLHDSQATGRVVSYDPKPRGVTQINREAFA
SFPFDATASLVRRKGSGTRPPVGWEVKSSQQLAASLRHPDPGAPGTTTHF
GRDAAADCQAGALVAGQAQRRSGGGDIAGCRKVVPAGAGAVGSMETREYK
AAAGAVRSPKSGDTLHMLAPPSDIGLLGRGGARGVFGTARIASSDARATA
AAAVEGQCVEDVVESGHAGPVLLLGRTKTKPLSPGPSHSTGGPHAHGENG
EKHLEGGELGESLGKHDNSSACHRHRHRHRRHFHQHLSQEMKVCSSWTGS
AQTDAPSIGSDDDNDDTAVRLRCGSGGSNCCSEAAHIDSKACAKGAAALL
VTEQQLATKAEAEVLPFPPLAEQQNSAAVVSAVASGAGGSARANDETVVR
VSELPDVCAICLGQYATGEEVHVLPCLHIFHAECLDVWIRGHPSCPYCKG
DLNVIPQGNSSSPETTAICYACSVLSRMVSFVAGPFVRFFRGLWERRRQQ
REQTAEGGGEREAGEGNEAAEGVVSFAPPALDSPAATPVPPSVVAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD