prot_Ecto-sp6_S_contig108.1164.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig108.1164.1
Unique Nameprot_Ecto-sp6_S_contig108.1164.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length99
Homology
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BLAST of mRNA_Ecto-sp6_S_contig108.1164.1 vs. uniprot
Match: A0A6H5JLU6_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLU6_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.590e-23
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0 
Query:   38 MVGAAVLDEAPESPITSTSPADDALLAPALLPSPLWSSLTRGRFDDGWACGFRESILANPSA 99
            MVGAAVLDE PE P+TSTSPADDALLA ALLPSPLWSSL+RGRFD+GWA G RESILAN +A
Sbjct:    1 MVGAAVLDEPPEPPLTSTSPADDALLASALLPSPLWSSLSRGRFDEGWAGGCRESILANAAA 62
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1164.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JLU6_9PHAE1.590e-2383.87PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig108contigEcto-sp6_S_contig108:516524..516820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig108.1164.1mRNA_Ecto-sp6_S_contig108.1164.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig108 516524..516820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig108.1164.1 ID=prot_Ecto-sp6_S_contig108.1164.1|Name=mRNA_Ecto-sp6_S_contig108.1164.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=99bp
GGARASSPSTREWSPSSSKPGGDCCCCVPAGGGVDSPMVGAAVLDEAPES
PITSTSPADDALLAPALLPSPLWSSLTRGRFDDGWACGFRESILANPSA
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