prot_Ecto-sp6_S_contig108.1119.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig108.1119.1
Unique Nameprot_Ecto-sp6_S_contig108.1119.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length330
Homology
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: D7FY66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI)

HSP 1 Score: 612 bits (1577), Expect = 3.480e-219
Identity = 322/329 (97.87%), Postives = 322/329 (97.87%), Query Frame = 0
Query:    1 MSQESSAPGVDDPARHQGPGQGGEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDMDEXXXXXXXXGQDGRHTMEE 329
            MSQESSAPGVDDPARH GPGQ GEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMD   XXXXXXXX  DGRHTMEE
Sbjct:   80 MSQESSAPGVDDPARHHGPGQRGEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDXXXXXXXXXXXXXDGRHTMEE 408          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A6H5JRH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 6.740e-180
Identity = 263/286 (91.96%), Postives = 269/286 (94.06%), Query Frame = 0
Query:    1 MSQESSAPGVDDPARHQGPGQGGEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQI 286
            MSQESSA  VDDPARH  PGQGG EEDEESDEVIFSCRLDNA+SITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFG GSLAQTSVSMAYQEARATFRLTLE GGVFTSCEIRTIHQDEEAM+FSTLAKAFGRSKEVCRCILK E    AFQELADLNGATSVSVTFGQEA HLQL AKGSNGSSEIDFPKSS++ VCFECTAR VSW +LMTGMETGMRALGHANETYFRVNEEGILCIQHQ+
Sbjct:    1 MSQESSASRVDDPARHHDPGQGGVEEDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGRGSLAQTSVSMAYQEARATFRLTLEGGGVFTSCEIRTIHQDEEAMKFSTLAKAFGRSKEVCRCILKGE----AFQELADLNGATSVSVTFGQEATHLQLYAKGSNGSSEIDFPKSSQSLVCFECTARGVSWAFLMTGMETGMRALGHANETYFRVNEEGILCIQHQV 282          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A6H5JQZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ4_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 5.390e-121
Identity = 198/244 (81.15%), Postives = 204/244 (83.61%), Query Frame = 0
Query:    1 MSQESSAPGVDDPARHQGPGQGGEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECT 244
            MSQESSA  VDDPARH  PGQGG EEDEESDEVIFSCRLDNA+SITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQE+          G      E++  +   EAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEA HLQLSAKGSNGS     P SS       C+
Sbjct:    1 MSQESSASRVDDPARHHDPGQGGVEEDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQESDVPPHPGRGRG----VHELQDKNHPPEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEATHLQLSAKGSNGSRYAMAPPSSHGAPGSRCS 240          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A835YYW5_9STRA (Repair protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA)

HSP 1 Score: 327 bits (838), Expect = 8.140e-108
Identity = 165/288 (57.29%), Postives = 213/288 (73.96%), Query Frame = 0
Query:   24 EEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMDMD 310
            E E EE D  +FSCR+DNA+++TT+LSCLSHG+RK Q AQCE T E +T V++G+AK+TQAQG+L   LFQ Y+C E G +FGINL+ LLECLQIFG    A  S ++AY    ATF++TLEE GVFTSCE+RT+ ++ +AMEF+ LA AF  S E CRCI++SE LKEAFQELADL GA S+     Q APHL+LS  GS GSS I FP+SSEAFV F CT   + W+Y ++ +E GMRAL  A ET+ R+NEEGI+CIQHQ+ ++ G  ++VD L+C +  ++D D
Sbjct:   27 EREAEEKD--LFSCRIDNARAVTTVLSCLSHGSRKAQHAQCEATPEGLTFVITGKAKFTQAQGALSKDLFQAYECEEDGGRFGINLSMLLECLQIFGMN--ASASAALAYYPGTATFKVTLEENGVFTSCELRTLVEESDAMEFAALAAAFRSSPEECRCIIRSETLKEAFQELADLPGAASIVFEASQHAPHLKLSTSGSYGSSSIQFPRSSEAFVHFSCTPPSLRWSYALSALEGGMRALPFAQETFVRINEEGIMCIQHQVQVA-GHNTYVDFLICANTADIDDD 309          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A4D9CMN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA)

HSP 1 Score: 263 bits (671), Expect = 3.950e-83
Identity = 137/276 (49.64%), Postives = 185/276 (67.03%), Query Frame = 0
Query:   26 EDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCV-EGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMG-QTSFVDVL 299
            E +  +E +FSCR+D+ K IT  L+CLS G+RKDQ AQ EV  E +  +V+GRAK+TQ+QG+ + +LFQ + C  EG  F I+L  LLECLQ+FG  SL  T ++M+Y+  +A  RLTLEE GV T+CE+R +   E+A + + LA AF    EV R ILKS++LKEA  EL+DL GA SV V+     P+  L+  G  G  EI  PKSSEAFV F+C+  R SW+Y +  +  GMRAL  A ETY R+NEEGI+C+QHQ+  +   Q++F+D L
Sbjct:    9 EQKTDEEPLFSCRIDSTKIITATLACLSDGSRKDQLAQVEVNNEGIVFIVTGRAKFTQSQGTFNRALFQAFQCQPEGGSFTIDLHLLLECLQVFGAASLTNTMLTMSYEPRKAALRLTLEEQGVLTTCEVRALEAGEDAFDLAALASAFRSRPEVLRAILKSDVLKEAISELSDLPGAGSVRVSVAPHEPNFHLATNGICGGLEIFLPKSSEAFVHFDCSEAR-SWSYGLGALNQGMRALTVAKETYVRINEEGIMCVQHQVENTASRQSTFIDFL 283          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A7S2WVI5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVI5_9STRA)

HSP 1 Score: 240 bits (612), Expect = 3.610e-74
Identity = 128/279 (45.88%), Postives = 181/279 (64.87%), Query Frame = 0
Query:   33 VIFSCRLDNAKSITTILSCLSHGT-RKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIH---QDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCP-DIQE 306
             +FSCRL++AK +  ++SCL+H   RK+  A C+V  + +   ++ RAK  Q  G+L   +F  ++C E   F +NL  +L+CL +FGP +++ T+++M Y +  A F+LT+EE GVFT C+I+T+    QDE+  EFS L  +F R  E C+ ILKSE LKEA  EL DL+GA+ V V     APH QL+A G+ G+ EI+FPKSSE FV F C+   + +TY +  +  GMRAL  A ET  R+N  GI+CIQHQ+    G TSFVD L+CP D+Q+
Sbjct:   18 TLFSCRLESAKELHALVSCLAHEKKRKEHIALCQVNDQGLNFSMNQRAKTIQVSGTLPRRVFSSFECHEHGAFCLNLGMVLDCLSLFGPAAISSTAIAMTYSKEDAVFQLTMEEHGVFTRCDIQTLDGSAQDED--EFSQLTSSFRRDPEACKLILKSEFLKEALYELQDLSGASFVDVFISPTAPHFQLAATGNLGTLEIEFPKSSELFVLFSCS-EALRFTYRLEALIRGMRALLVAAETCVRINVVGIMCIQHQVQNHSGVTSFVDFLMCPADLQD 293          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A7S2G8B6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA)

HSP 1 Score: 209 bits (533), Expect = 9.900e-63
Identity = 112/268 (41.79%), Postives = 161/268 (60.07%), Query Frame = 0
Query:   45 ITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GAKFGINLTTLLECLQIFGPGSLAQTS--VSMAYQEARATFRLTLEEGGVFTSCEIRTIHQD---EEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQE 306
            I ++L C+ +GTRKDQ AQC+V    ++  +  R++ TQ  G++D + F E++C + G  F IN+ TLL+CL IFGP      S  V+M++ +      L L+E GVFT C+I+ I  D   E    F+  +  F +    C+CI+KSE LKEA  EL DLN AT +SV    +APH Q+SA+GS G  +I+FP+SS+ F  FECT   +   Y       GMRAL  + E+YFR+NE G+LCIQH +    G   F+D ++ P+I +
Sbjct:    1 IQSMLQCIVNGTRKDQHAQCQVHAGGISFSLQSRSRTTQVTGTMDKNCFTEFECYDDGGTFCINICTLLDCLSIFGPQQAGTNSTVVTMSFDKNLCQLILNLDEDGVFTRCDIQAIENDGDEEVGARFAQFSDEFRQKPSPCKCIVKSEQLKEALNELRDLNNATRLSVLLSPQAPHFQISAQGSLGFLDIEFPRSSDLFELFECT-ETMKTEYDYDSFVQGMRALTVSEESYFRINEGGLLCIQHHVETHGGGRCFIDFIMLPNIAD 267          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A7S0XDK7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDK7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.740e-46
Identity = 88/222 (39.64%), Postives = 135/222 (60.81%), Query Frame = 0
Query:   86 GSLDSSLFQ---EYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDI 304
            G  D  +F+   E+D  E  +  INLTT ++CL +FG  SL  T+ ++ Y    A  +L+LE+ G+ T+C+I T++ D        L  AF  S E+C+ ILKSEILKEA  +L+D+ GAT+V++   +   +L     G+ G  EI+FP+ S+ FV F C  +   WTY +T ++ GM+AL  + ET+ R+NEEG++CIQHQI  + G   ++D L+  D+
Sbjct:    5 GYFDDYIFKPINEHDNDERIRIFINLTTFVDCLLLFG-SSLETTAGTITYNSDDALLKLSLEDSGILTTCDISTLYMDNNEDIGYELFSAFLSSNELCQVILKSEILKEAMHDLSDVYGATTVAIEITKNPENLTFMTVGTMGECEIEFPRLSDLFVSFRCD-KSSKWTYPLTSLQLGMKALNISKETFIRMNEEGVICIQHQIETNRGHEIYIDYLMVSDV 224          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A8K1C6J7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J7_PYTOL)

HSP 1 Score: 159 bits (402), Expect = 2.090e-42
Identity = 99/307 (32.25%), Postives = 157/307 (51.14%), Query Frame = 0
Query:   28 EESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQ--EYDCVEGAK----------------FGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTF-----GQEAPH--LQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVS------WTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 303
            ++ ++ +  C  ++ K + T+LSCL  G +KDQ+ +C++    M      + K  Q + SL S LF   E+   E ++                F +NL+ L+E L +FGP SL  +S+ ++Y    A   L +E+ GV   C ++ +  +   +       AF +S  + RCI++SE L +AF EL DL  A SV++       G  + H  L LSA    GS EI+F +SS AF+ F CT    S       T+ +  ++   +ALGH+NET+ R+N +G L +QH I    G  +FVD L+ P+
Sbjct:   39 DQREKPVLVCTSESVKLLVTLLSCLFQG-KKDQRIRCDIDSAGMLFTSHSKGKSLQIKTSLGSELFDTFEFRASETSQLDHDDEDDSQLDTQYSFALNLSALIESLSMFGPASLPTSSLRLSYFAESARLTLLVEDNGVICECAMQVLELESNDIAQLEFESAFEQSAVIGRCIMQSEPLHDAFAELYDLPSAASVAIAMYEDDEGPASSHKCLSLSATSETGSCEIEFARSSSAFIEFFCTNDETSDDGSASATFHVAVLQQAFKALGHSNETFLRMNADGFLSVQHMIESGSGDKAFVDALISPE 344          
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Match: A0A2D4C542_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C542_PYTIN)

HSP 1 Score: 147 bits (372), Expect = 1.610e-38
Identity = 95/295 (32.20%), Postives = 149/295 (50.51%), Query Frame = 0
Query:   45 ITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGA-------------KFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTF---GQE----APH------------LQLSAKGSNGSSEIDFPKSSEAFVCFECTA----RRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 303
            + T+LSCL  G +KDQ+ +C+V    M      R K  Q +  L + LF+ Y+  E                F +NL  L+E L +FG  +LA +S+ ++Y    AT  L +E+ GV   C ++ +  +   M       AF +S  + RCI++SE L++AF EL DL  A  V+++    G E    + H            L LSA+   GS EI+F +SS AF+ F C +       + T+ +  ++   +AL H+NET+ R+N +G L +QH I    G+ +FVD L+ P+
Sbjct:    1 MVTLLSCLFQG-KKDQRVRCDVDNAGMLFTAHSRGKSLQIKTXLGAXLFESYEFREPDDTNGDGDGLDTQHSFALNLNALIESLSMFGSSALATSSLRLSYFPQTATLTLVVEDNGVICECAMQVLELEGNDMSQLEFESAFEQSAVLGRCIIQSEPLQDAFAELYDLPSAACVTISMFPDGDENQIDSDHRRRSVAHAQGRCLSLSAQSETGSCEIEFARSSAAFIEFFCASSGDNEPCAATFHVAVLQQAFKALAHSNETFLRMNADGFLSVQHMIETGTGERAFVDALVSPE 294          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig108.1119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY66_ECTSI3.480e-21997.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRH0_9PHAE6.740e-18091.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQZ4_9PHAE5.390e-12181.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYW5_9STRA8.140e-10857.29Repair protein Rad1/Rec1/Rad17-domain-containing p... [more]
A0A4D9CMN7_9STRA3.950e-8349.64Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2WVI5_9STRA3.610e-7445.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G8B6_9STRA9.900e-6341.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0XDK7_9STRA2.740e-4639.64Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A8K1C6J7_PYTOL2.090e-4232.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C542_PYTIN1.610e-3832.20Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003021Rad1/Rec1/Rad17PRINTSPR01245RAD1REC1coord: 128..145
score: 33.33
coord: 290..305
score: 36.61
coord: 147..167
score: 26.53
coord: 269..286
score: 28.57
coord: 37..54
score: 23.81
IPR003021Rad1/Rec1/Rad17PFAMPF02144Rad1coord: 34..284
e-value: 5.6E-42
score: 143.7
IPR003021Rad1/Rec1/Rad17PANTHERPTHR10870CELL CYCLE CHECKPOINT PROTEIN RAD1coord: 25..310
IPR003011Cell cycle checkpoint protein, Rad1PRINTSPR01246RAD1REPAIRcoord: 283..296
score: 40.0
coord: 102..118
score: 57.65
coord: 231..244
score: 32.86
coord: 63..76
score: 27.14
NoneNo IPR availableGENE3D3.70.10.10coord: 31..304
e-value: 3.0E-69
score: 234.9
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 180..301
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 61..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig108contigEcto-sp6_S_contig108:40616..46685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig108.1119.1mRNA_Ecto-sp6_S_contig108.1119.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig108 40119..48028 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig108.1119.1 ID=prot_Ecto-sp6_S_contig108.1119.1|Name=mRNA_Ecto-sp6_S_contig108.1119.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=330bp
MSQESSAPGVDDPARHQGPGQGGEEEDEESDEVIFSCRLDNAKSITTILS
CLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE
GAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFT
SCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLN
GATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSW
TYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLL
CPDIQEMDMDEEQEEEEEEGQDGRHTMEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003021Rad1_Rec1_Rad17
IPR003011Cell_cycle_checkpoint_Rad1