prot_Ecto-sp6_S_contig106.1055.1 (polypeptide) Ectocarpus species6 EcLAC_371

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp6_S_contig106.1055.1
Unique Nameprot_Ecto-sp6_S_contig106.1055.1
Typepolypeptide
OrganismEctocarpus species6 EcLAC_371 (Ectocarpus species6 EcLAC_371)
Sequence length751
Homology
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 535 bits (1377), Expect = 5.040e-177
Identity = 279/311 (89.71%), Postives = 284/311 (91.32%), Query Frame = 0
Query:  150 FSNNAKTGGLAISPPTLPRRTPAXXXXXXXXXXXRALASDAFGRPYGPPSDDFAGGPAAXXXXXXXVAGMAGSRAPVSRSAANAGTGAGRRRQRGEEGGGRAGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRDLAPYPNCSPMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVPGSGPRPICRDFPPYPNVSPP-----TEPDQEEVRGSVT 455
            FSN AKTGGLAISPPTLPRRTPA           RALAS+AFGRPYGPPSDDFAGGPAA XXX   VAGMAGSRAPVSRSAANAGTGAGRRRQRGEEGGGRAGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFH PDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRDLAPYPNCSPMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVPGSGPRPICRDFPPYPNVSPP     TEP+     G+++
Sbjct:   21 FSNTAKTGGLAISPPTLPRRTPAGASSPAAAAAARALASEAFGRPYGPPSDDFAGGPAAAXXX---VAGMAGSRAPVSRSAANAGTGAGRRRQRGEEGGGRAGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRDLAPYPNCSPMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVPGSGPRPICRDFPPYPNVSPPGLGGSTEPESRGQGGALS 328          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 494 bits (1272), Expect = 2.550e-156
Identity = 261/299 (87.29%), Postives = 263/299 (87.96%), Query Frame = 0
Query:  150 FSNNAKTGGLAISPPTLPRRTPAXXXXXXXXXXXRALASDAFGRPYGPPSDDFAGGPAAXXXXXXXVAGMAGSRAPVSRSAANAGTGAGRRRQRG----EEGGGRAGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRDLAPYPNCSP---MERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVPGSGPRPICRDFPPYPNVSP 441
            FSNNAKTGGLAISPPTLPRRTPA           RALAS+AFGR YGPPSDDFAGGPAA        AGM  SRAPVSRSAANAGTGAGRR  R     EEGGG AGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFH PDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCR LAPYPNCSP   MERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGV GSGPRPICRDFPPYP+VSP
Sbjct:    3 FSNNAKTGGLAISPPTLPRRTPAGASSPAAAAAARALASEAFGRSYGPPSDDFAGGPAAAAEVA--AAGMTVSRAPVSRSAANAGTGAGRREARPRSLREEGGGGAGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRALAPYPNCSPVGEMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVAGSGPRPICRDFPPYPDVSP 299          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 2.320e-26
Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 0
Query:  258 EAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNFATEAEADR 336
            +AP T  RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFH  D ++ NF +E EADR
Sbjct:   91 KAPTT-HRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADR 168          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 114 bits (284), Expect = 4.030e-25
Identity = 53/64 (82.81%), Postives = 60/64 (93.75%), Query Frame = 0
Query:  265 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNF 328
            RRRGRKG+SIYRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR+H   ++M NF
Sbjct:   21 RRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.910e-21
Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 0
Query:  275 YRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNF 328
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR H  D++M NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 79.3 bits (194), Expect = 1.270e-12
Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 0
Query:  266 RRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNF 328
            RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E EAAKA+D +A  +  D ++ NF
Sbjct:  143 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 79.3 bits (194), Expect = 1.560e-12
Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 0
Query:  266 RRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNF 328
            RRG +G+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E EAAKA+D +A  +  D ++ NF
Sbjct:  156 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A835ZDL0_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.630e-12
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 0
Query:  264 RRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNFATEAEA 334
            R RRGRKG+SIYRGV  TREGK+RAV+Y ERKQ+YLGVY  E+ AA+AHD+    H    +  NF  E  A
Sbjct:  123 RPRRGRKGKSIYRGVSHTREGKYRAVLYVERKQIYLGVYNDEVSAARAHDKGVLAHGLGHAYLNFKLEEAA 193          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.820e-12
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0
Query:  260 PVTPRR-----RRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTNF 328
            PVTP R     RRG +G+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE +AA+A+D AA  H  + +  NF
Sbjct:  388 PVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 461          
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Match: D7FLT6_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT6_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.930e-11
Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
Query:  266 RRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHLPDKSMTN 327
            RRG  G+S ++GVC+T  G WRAVIY +RKQ YLGV++SE +AA+A+D AAR H P   + N
Sbjct:  304 RRGPPGQSSFKGVCITPAGTWRAVIYVDRKQKYLGVFDSEFDAARAYDAAARVHCPGSQLNN 365          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp6_S_contig106.1055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FZ71_ECTSI5.040e-17789.71AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE2.550e-15687.29AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JUY3_9PHAE2.320e-2677.22AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A836CI56_9STRA4.030e-2582.81AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CH07_9STRA1.910e-2183.33AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A6V1UZI2_HETAK1.270e-1260.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK1.560e-1260.32Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZDL0_9STRA1.630e-1259.15AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
A0A6H5KQM0_9PHAE4.820e-1255.41AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D7FLT6_ECTSI1.930e-1156.45AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 274..335
e-value: 1.9E-7
score: 40.7
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 274..329
score: 12.457
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 274..331
e-value: 1.4E-10
score: 42.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 715..732
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..714
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 733..750
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 273..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp6_S_contig106contigEcto-sp6_S_contig106:360420..372149 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species6 EcLAC_371 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp6_S_contig106.1055.1mRNA_Ecto-sp6_S_contig106.1055.1Ectocarpus species6 EcLAC_371mRNAEcto-sp6_S_contig106 359467..372149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp6_S_contig106.1055.1 ID=prot_Ecto-sp6_S_contig106.1055.1|Name=mRNA_Ecto-sp6_S_contig106.1055.1|organism=Ectocarpus species6 EcLAC_371|type=polypeptide|length=751bp
MSEIQQQEGGKGGREEQRKASGVGGMEDDGGGGDGDGGAAAVGATGRAPA
HEHPAAETRKLPPAASAATTTPKRATRASTGAPIALTAKGSLYKANKDTG
ASSEEEGGDGGGGGGRYSNNNNNNNNARRMHGRAAAAGPLAPPSSSRMAF
SNNAKTGGLAISPPTLPRRTPAGASSPAAAAAARALASDAFGRPYGPPSD
DFAGGPAAAAAAAAAVAGMAGSRAPVSRSAANAGTGAGRRRQRGEEGGGR
AGGDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLG
VYESELEAAKAHDRAARFHLPDKSMTNFATEAEADRVIAEQEECGDGGGE
CRSCQSVVGPTRRPINCRDLAPYPNCSPMERLRFHANLSRGLEPYYRGPS
DGYPGEGDAEGNDECRSCQGVPGSGPRPICRDFPPYPNVSPPTEPDQEEV
RGSVTGGRPRRAPRGERATAAAAASTVNPPVAATILSPPPPPPQQQQQRP
PPPRATVTGSRAPARVSDSHGTGVTAAAAEASVAASVAAATTISGLTTTA
VGRDGRVAEGPVEEGWQKDRAFRVASRRSLLARPAAAGTTPSLSCRVACS
TTALPRRRSCSRVSAAAGDQKAEARAGRCRSNSCRGMGGGVDSRRLLALR
DWDRLTRWRLPRPGGPWRSSTSWPAGRCRPLGSGAATSAAATAALLLLPP
PVFRRWRPPPPPPDSRAWLASRLLLLLLPLTVPRRASLRSLRWPPWPRWR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf